Cinc001017.1
Basic Information
- Insect
- Clistopyga incitator
- Gene Symbol
- KBTBD4
- Assembly
- GCA_947507545.1
- Location
- OX382177.1:1780-4484[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.00034 0.48 10.5 0.0 2 38 199 235 198 241 0.80 2 4 2.5e-11 3.6e-08 33.3 0.0 5 45 252 292 249 292 0.92 3 4 0.018 26 5.0 0.0 7 34 306 332 302 338 0.82 4 4 6.4e-12 9.2e-09 35.2 0.1 4 39 363 398 360 403 0.93
Sequence Information
- Coding Sequence
- ATGTCCGGAAGGATAAGCGGCGGTGAAGCGCAACTTCACCACGAGAGCTATTGTTTCAAATGGAGCGATTATCAGAATCACTTGTCGGGAGTGGTTCGACAACTTTTGGAAGAAGAATGCATGGTCGACGTGACTCTCGTCGCTGCCGGAGAACGCATACAAGCTCATCGAATCGTACTCTCCTCCTGCAGCACTTTATTTCAAGAACTACTCAGTCAGGTGAACGAGGATCATTCCACGATAATATTGAGTGATATTTCGGCACAGGACGTCCGATGTATTGTAGATTTCAGCTATCACGGCGAAGTTAGAATTCCCGTTGAAAATATCACCAATTTACTCGAAGCTGCTCACTCCCTTAAAATCTGTGGTCTTATGGAGATCGACGGACTAGATGAGAATGACGGGATTATAAGTACAAAAGAGTTAACCGAGGATAGTACGGAATCGATAGGGGAGTTGAACGAGTCGGATGAGCGCTCTTCAGAGCCATTATCGAGTGAAAAGAGCTCTGAAAAAGCGGAGAAAGATGATTCGGGGCCTGGAAAAAATAAAAGAAAGCGCAGAAGAGACTCGACGAAACGGGAATACAACGAGGATATGCTAGCAGCGGCGATAAACGATCTAAAAGCCGGTCACACGCTCATAGAGTCAGCTACGAAAAATAACATACCACGTTCTACGTTGTATATGCGAGCCAAGGCACTGGGTATTCATTTGAATGCCTCGAGGAACGAATATCCCGCGGAATGCATGAAAGCCGCGATAGACGGGGTCATTGGAGGCTTGAGCTTGCAGCAAGCTTCCGAAAAATTTTATATCCCAAAAACTGTGCTCTGGCGGCGAATACAGAAGGAAGGTTATCAGGTAATGCGCTCCGAATTAAAGAGGTCCTATGGATCGGACAAGAGGGAAGCCGCGGTCAGAGCTCTACAAAGAGGTGAAAATCTTACCAAGGTTGCACTCGAATTTCAGATACCAAAAACTACGCTGTTTCGTGATAAAGCACGACTGGTAGACGAGGGCAAGCTGCCGGAATCATTCTGGAAGAAGCGAAAGGCCGGTGATGAACAAGTCAAACGATTGCGCCTGAAAGAGGCTGTAGCGGCTTGTAGAGAGGGCAAAATGTCCCAAGCCGTTGCATCTTTGACCTACAGAATTCCAAAAACGACTATTTGGCGACGGCTCCAGCAAGAGGGCAAAAATTCCGAGCGTGTCACTACCGCAGCTGCAAAAGCCGCGGAACAAGAGCTCGACGTAACCGACGTAAAGATCGAACAACAGAATCCTGAATTTGACCTTTGCGAGGTCTCATCGGAAGTTCCTATAACGTACATAGACGAGACGAGCTTGCCCGAGGATTCTGTTATAATTTTAACTACCGAAGACGTCGACGGCCTTAATCTCGAGGCAGGTAGACAAATTATCGTCAATCAAGATTCCGGACAAGAGTACGTCCGGTGTGCCTTGAGCATAGGAGAAAATGCAGAGAGTACCGGCTACCAATCGGCGGCTAGTTAA
- Protein Sequence
- MSGRISGGEAQLHHESYCFKWSDYQNHLSGVVRQLLEEECMVDVTLVAAGERIQAHRIVLSSCSTLFQELLSQVNEDHSTIILSDISAQDVRCIVDFSYHGEVRIPVENITNLLEAAHSLKICGLMEIDGLDENDGIISTKELTEDSTESIGELNESDERSSEPLSSEKSSEKAEKDDSGPGKNKRKRRRDSTKREYNEDMLAAAINDLKAGHTLIESATKNNIPRSTLYMRAKALGIHLNASRNEYPAECMKAAIDGVIGGLSLQQASEKFYIPKTVLWRRIQKEGYQVMRSELKRSYGSDKREAAVRALQRGENLTKVALEFQIPKTTLFRDKARLVDEGKLPESFWKKRKAGDEQVKRLRLKEAVAACREGKMSQAVASLTYRIPKTTIWRRLQQEGKNSERVTTAAAKAAEQELDVTDVKIEQQNPEFDLCEVSSEVPITYIDETSLPEDSVIILTTEDVDGLNLEAGRQIIVNQDSGQEYVRCALSIGENAESTGYQSAAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00343299; iTF_01207495; iTF_01207265; iTF_01497598; iTF_01497314;
- 90% Identity
- iTF_00343299;
- 80% Identity
- iTF_00343299;