Cdum025927.1
Basic Information
- Insect
- Clepsis dumicolana
- Gene Symbol
- -
- Assembly
- GCA_963691665.1
- Location
- OY829532.1:6007492-6009816[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.001 1.5 9.6 1.0 18 43 7 29 3 30 0.94 2 18 0.0018 2.7 8.8 0.0 18 43 66 88 59 89 0.89 3 18 0.00074 1.1 10.0 0.9 17 43 96 119 94 120 0.91 4 18 0.00087 1.3 9.8 0.3 18 44 127 150 125 150 0.92 5 18 2.3e-05 0.034 14.9 0.9 16 43 155 179 152 180 0.91 6 18 0.042 63 4.4 0.6 17 44 185 209 181 209 0.88 7 18 0.39 5.8e+02 1.3 0.0 19 44 241 263 238 263 0.84 8 18 0.7 1.1e+03 0.5 0.2 30 43 302 315 291 316 0.71 9 18 1.4 2.1e+03 -0.4 0.2 18 29 323 334 318 340 0.84 10 18 0.027 40 5.1 0.0 16 44 350 375 346 375 0.84 11 18 0.016 24 5.8 3.2 13 43 395 422 390 423 0.85 12 18 0.1 1.5e+02 3.2 7.9 6 29 417 440 414 453 0.71 13 18 0.0031 4.7 8.0 3.0 13 43 453 480 445 481 0.78 14 18 0.052 79 4.1 0.8 17 44 486 510 482 510 0.85 15 18 9.1 1.4e+04 -3.0 0.9 18 27 517 526 515 533 0.81 16 18 2.5 3.8e+03 -1.3 0.2 34 43 560 569 546 570 0.67 17 18 2.4 3.6e+03 -1.2 1.1 13 29 572 588 564 596 0.74 18 18 0.00087 1.3 9.8 2.2 6 43 599 635 597 636 0.78
Sequence Information
- Coding Sequence
- ATGTCTTCACCAGAATACGAGTGTGATTACTGCACTCGCACATTCACAAGAAAATACAACTTGTCAACTCATATAGAAAACTGTCATATAAACTCAACATGCTACTGCGATATATGTGATCAGAGGTTCGGTAGTCCAGCGGGCTTACAACTACACCTGAGCCGTGGCCACAACAGATTCTTTCAACCGTACCCAGAGTGTGACCTTTGCGGACGTATCTTTACTAGAAAACAAAACGTGGTTTCACACATGGTGACGGTCCATTTACAAGGAGTAGGTCCGCAGATTCGGTGTAATATCTGTTTTAAGACTTTCACTACGGAAAGGAATCTCAAACGGCACGTGAATCAACTGCATAATCCCGACGTTGAGTATCCGACTTGTGATTATTGTAGCAAAGTGTTTAAAGGCAAGCATTCTCTCATAGCCCACATTCAAGCCACACACAACGTCTTGAAGGAGATAATAAAATGCGAGTTGTGTGGTAAAGTTTACACGAATAACAGAAATCTGAAACGTCAtattgaaatgtttcacggcgAGAAGGGGGAATTCAGATGCGATCGCTGTCCTAAAGTCTACACGTCTAACCAGAGCTTGAGACGCCACGCCCGAACGAGACATAACACCGAAGAATTGATCTTCAAACCTGATGTTGAAATTATAGAAATTGAAGACACTAATGACGCCACATATGACTGTCAAACTCTTGAGTTCCCTTGTCCGTACTGCGATAATCACTACGCCGAAGAACCGATGCTGAGACAGCACGTGAAAACCGATCATCCATTCAAAGACTTCTACGAATACTGCAGGAACTCTTTACTCAAACAAATGACAGTTAAAACTGAGGAGAAACCGGttaaagttaattataattGTGAAAATTGCAGTTCCGTTTTTAACTCGGTTTATGATCTAAAAGATCATATGAGAACCAGTCATGACAGAGAGTACTCCCTTAGTACCTGCAACGTGTGCTTCAAAAAGTTTTACAGTAAAGAAACCATGTTTGAACATAAAAAAGTGTGTCTACCACCTCCCGATGTTAACAGTTGTAACTACTGTGATAAACTATTCACGGATATATCGAGCCTTGAGTTTCACATAAGGATTTTTCACCCGCAAGCTCAGATAGCAGACAATGATGTCACTTCGACTAATCTAGAAGATACGTCTACGGAAGCAGGTTCTTTCAAATGTGAACACTGCGACAGAATTTACTATAGCGACCGCTCTCTTAAACACCATATTAAATTGAAGCACACGACCGATGAGGTCGTTGAATGCGGTTTGTGCGGCAAAATCTGCAGTAACAAATACTACCTGGCGTCCCATATTAAGATAGTCCACAACAATGATTCTTGGTCAAAATGCGACTACTGTGACAAGCAATTTAAATCAAAGAGGAATATAAGGCGTCACATTGAGTACACGCATCTAGGAATGCAAAGATACAAGTGCATTGAATGTGAGACTTTATTCAAAGAGAAAAGAAGCCTCAGAAAGCATGTTAGAACTAAGCATCCTAATTCTACAATCTTCCCGCAATGCCATATTTGCTACAAGAGGTTCGAATCAGCCAAATCATGCAAGATACATCTCAAACTCTTACATTCATTTAACATGAATACATTCCCTTGCGATCTCTGCTCGGTGTCTTTCAGCTCCAACGAGGCTCTCAACATACACCTACAGACTAAGCATCTAGCCGAAGACCAGATCTTCAAATGTGAACAATGCAACCTCGTCTTCAACGGCCACGAGAAATTCGAGCACCACAACGAAATATGCCACGTGAATCTGCTTCCGAACATAAAACAGAAAGTCTTGCCGCGTTGCATTATATGCATCAAAGATTTCAGTACTCGCAAGACTTTGAAGCGCCATATAAAAAAGTTTCACGACGATTTTGATGCAGAAGAATTAGCTACGTACGGGTCTAAAAAGAGATTGTTTAACATCGAGTGTGATGAATGCATACAGAACTTCAATGACGATTTCTACTACGATGTGTATCAGAAGTTGAAGCATTTAAAAGACTCTATAGTCTTCAAGTGCGAGAGCTGCAGCTCGTCCTACGATTGCCTTGAATATTCTATCCAGAGATATAAAGTTGTGAATTTGGAAGCTTGCAAAAGTAAAATGATTCTAAGTGAGCTGTGTACCGCGGAAATGAGTGATGATGAGACCTCGAATAGTAGGTTGGGTGGGGAGAGTATGGAGCCAGAGAGTACCACGGGGGACATCACTGTTAAGACGGAACCCATGGACTTCGAGGTAGATGCTGATGTTAAGGCTAAGCTTAAGCCTATGACGCCgtag
- Protein Sequence
- MSSPEYECDYCTRTFTRKYNLSTHIENCHINSTCYCDICDQRFGSPAGLQLHLSRGHNRFFQPYPECDLCGRIFTRKQNVVSHMVTVHLQGVGPQIRCNICFKTFTTERNLKRHVNQLHNPDVEYPTCDYCSKVFKGKHSLIAHIQATHNVLKEIIKCELCGKVYTNNRNLKRHIEMFHGEKGEFRCDRCPKVYTSNQSLRRHARTRHNTEELIFKPDVEIIEIEDTNDATYDCQTLEFPCPYCDNHYAEEPMLRQHVKTDHPFKDFYEYCRNSLLKQMTVKTEEKPVKVNYNCENCSSVFNSVYDLKDHMRTSHDREYSLSTCNVCFKKFYSKETMFEHKKVCLPPPDVNSCNYCDKLFTDISSLEFHIRIFHPQAQIADNDVTSTNLEDTSTEAGSFKCEHCDRIYYSDRSLKHHIKLKHTTDEVVECGLCGKICSNKYYLASHIKIVHNNDSWSKCDYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSTIFPQCHICYKRFESAKSCKIHLKLLHSFNMNTFPCDLCSVSFSSNEALNIHLQTKHLAEDQIFKCEQCNLVFNGHEKFEHHNEICHVNLLPNIKQKVLPRCIICIKDFSTRKTLKRHIKKFHDDFDAEELATYGSKKRLFNIECDECIQNFNDDFYYDVYQKLKHLKDSIVFKCESCSSSYDCLEYSIQRYKVVNLEACKSKMILSELCTAEMSDDETSNSRLGGESMEPESTTGDITVKTEPMDFEVDADVKAKLKPMTP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00680825;
- 90% Identity
- iTF_00462589;
- 80% Identity
- iTF_00342418;