Basic Information

Insect: Chymomyza procnemis
Gene Symbol: RHOBTB1
Assembly: GCA_035046065.1
Location: JAWNOJ010000013.1:28386383-28389365[-]

Transcription Factor Domain

TF Family: BTB
Domain: zf-C2H2|ZBTB
PFAM: PF00651
TF Group: Zinc-Coordinating Group
Description: The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 2.7e-09 5.2e-07 29.8 0.1 3 49 256 300 254 317 0.79

2 3 9.8e-09 1.9e-06 28.0 0.0 50 100 391 440 377 446 0.85

3 3 4.3e-19 8.5e-17 61.3 0.0 8 103 476 570 471 577 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	2.7e-09	5.2e-07	29.8	0.1	3	49	256	300	254	317	0.79
2	3	9.8e-09	1.9e-06	28.0	0.0	50	100	391	440	377	446	0.85
3	3	4.3e-19	8.5e-17	61.3	0.0	8	103	476	570	471	577	0.92

Sequence Information

Coding Sequence: ATGGACAACGAACAGCCGCATCAGGAACTGGTGAAATGTGTCTTAGTTGGCGATACGGCAGTAGGCAAGACACGTCTCATATGCGCACGGGCCTGTAACAAACATGTTTCATTATCCCAACTGCTGTCTACCCATGTACCAACAGTCTGGGCCATTGATCAGTACCGTATCTATAAAGATGTACTCGAGCGTTCTTGGGAGGTTGTAGATGGTGTCAACGTGTCATTACGTCTGTGGGATACATTTGGGGATCACGATAAGGATCGTCGCTTTGCTTATGGACGTTCTGATGTGGTACTGCTCTGTTTTTCTATTGCGAGTCCCATATCGTTGCGGAATTGTAAAGTTATGTGGTATCCAGAGATAAGACGTTTCTGTCCAGATGTGCCGGTTATATTGGTTGGTTGCAAAAACGATTTACGGTATATGTATCGCGATGAGAACTACCTATCGTACTTTGGTGAAAAAGGCACTTTTATGCGAGCCGCCTTAAAAAGCGATTTGGTTATGCCTGACGAAGCGCGTTCAGTTGCTAAAGAATTGGGCGTGGCGTATTATGAAACAAGTGTATTTACCTACTTTGGTGTAAATGAAGTTTTCGAAAATGCCATACGATCTGCTTTGATAGCACGCCGTCAACAACGTTTTTGGATGACCAATCTTAAGAAGGTACAAAAGCCACTGCTGCAGGCACCATTTAGGCCACCAAAACCCCCGCCACCAGAGGTTACAGTTATGCTTGGCAATTACAGGCAggatatatacaatatgtttCTGTCTCAAGCCTATACTGATCTGATTCTTGCTGTGGGTGTTACCAAGTTTTCAGTGCATCGATTTATGCTTTCTGCATCTTCGAGCGTTTTTCAACGGCTCTTAAACACTGAACTTAGCGATATGGGAGCGCGCAGTAGCAGCGAATCCAGCATGGTTAGTTCAACATTTGGTGAATCCTGTTTGGCCGACTTTAATGATGACACTGAATATCTTATACGCCACGAATCACGCACACAACGcatGCTCGAGCAGCTTAAGCGCCGCTCTAGCTATCAAGCCTTACCACTGATTGAGTCGAAACGCCCAAGTGAGTTATACAAAGAGCTGCATCATCCTATACTACAGAGCATACGTCAAGTGCAACTTGAGAATAATCGCGGCATTACTACGTGTCAAACGTTGGTgactttcaaaaatgtttcaccTCAAGCTTTGCATCAATGtcttagatttatttatacgGGAACTATAGAAAAGAATTGGAGTAACATTCAAGAAATAAAGGAAATTGCAGACTATTTAGATCTTTCGCAATTAACTCTTTTACTTACTAAGCCACAAAGTGTCATGGTGAGTCCCAGTGAGGAGCCACATCCGCACATTTGTCTTCACATCAAGGAAAGTATGGAACGTCACTGTGTTGGTGATGGTTGCTTCAGTGATGTTACTTTTGAGTTAGATGATGGTCAAATGAAGGCGCATCGTGCTGTGCTGGTGGCACGCTGTGAAGTTATGCGTGCCATGTTGTCGGGAGATTTTCGTGAGGCGCACACTAACATAATTATGTTTCCAGGCGTAACGGTTTACACATTCCACAAACTTTTGTGTTATTTATATACAGATCAAATTCCTCCAATATCTGCCGTTAAATGCGTTAATCTGCTTGAATTGGCCAACCGCCTTTGTCTGCCGCGTTTACTAAATTTGATTGAGTGCCGTGTTATTGAAGATCTAACAATGATTTCGCAAGAGGAAACCAATGAAACCGTAAATCACTGTTTAAACTTACTAGAGTCGGTAAAGCTACACAATGGACACCAGTTGGCAGAGTGGTGCATGTCATACCTTTGTGTCAACTATAACATTATATGCAAGTACTCACTAAAAGGACTAAGAAGTCTGCATCAGGATAATCAAGACTACTTGCGCGAACATCGTTGGCCGCCTGTTTGgtatttgaaagattttgataATTACCAGCGTTGTGTTAACGAACTAAACAAGGAGAAGAAAAGCTCGCGTAGGGATGTGCCAAGTGATGATGAGGGCTGTCTGTGCTTTGCAGGAGTATTATCTTGGCTGCTAGGTAAACCAAAACGCAGCAGAAACACGGTTGAAGGAAGTGGCGAGAGCAATACATCAGATAATCAAATCTTTAATAGTAATGGCAATTCAATCAACCACATTGACTTGGAAGCGGAAATTGATTTGAATCTATGA
Protein Sequence: MDNEQPHQELVKCVLVGDTAVGKTRLICARACNKHVSLSQLLSTHVPTVWAIDQYRIYKDVLERSWEVVDGVNVSLRLWDTFGDHDKDRRFAYGRSDVVLLCFSIASPISLRNCKVMWYPEIRRFCPDVPVILVGCKNDLRYMYRDENYLSYFGEKGTFMRAALKSDLVMPDEARSVAKELGVAYYETSVFTYFGVNEVFENAIRSALIARRQQRFWMTNLKKVQKPLLQAPFRPPKPPPPEVTVMLGNYRQDIYNMFLSQAYTDLILAVGVTKFSVHRFMLSASSSVFQRLLNTELSDMGARSSSESSMVSSTFGESCLADFNDDTEYLIRHESRTQRMLEQLKRRSSYQALPLIESKRPSELYKELHHPILQSIRQVQLENNRGITTCQTLVTFKNVSPQALHQCLRFIYTGTIEKNWSNIQEIKEIADYLDLSQLTLLLTKPQSVMVSPSEEPHPHICLHIKESMERHCVGDGCFSDVTFELDDGQMKAHRAVLVARCEVMRAMLSGDFREAHTNIIMFPGVTVYTFHKLLCYLYTDQIPPISAVKCVNLLELANRLCLPRLLNLIECRVIEDLTMISQEETNETVNHCLNLLESVKLHNGHQLAEWCMSYLCVNYNIICKYSLKGLRSLHQDNQDYLREHRWPPVWYLKDFDNYQRCVNELNKEKKSSRRDVPSDDEGCLCFAGVLSWLLGKPKRSRNTVEGSGESNTSDNQIFNSNGNSINHIDLEAEIDLNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00336808; iTF_01556919; iTF_01550335; iTF_00335962; iTF_00338401; iTF_00337592; iTF_00574877; iTF_00536102; iTF_00619206; iTF_00607848; iTF_00517769; iTF_00546025; iTF_00483754; iTF_00504747; iTF_00591756; iTF_00588206; iTF_00484497; iTF_00504049; iTF_00577843; iTF_00507670; iTF_00480919; iTF_00580796; iTF_00565437; iTF_00471679; iTF_00487361; iTF_00512065; iTF_00539715; iTF_00604905; iTF_00578602; iTF_00596715; iTF_00494445; iTF_00529621; iTF_00581596; iTF_00536830; iTF_00548126; iTF_00592447; iTF_00605632; iTF_01200961; iTF_00190021; iTF_01415113; iTF_00366571; iTF_01486287; iTF_00351924; iTF_00624820; iTF_01470582; iTF_01132985; iTF_01181246; iTF_00257919; iTF_00972288; iTF_00203650; iTF_00527362; iTF_00918210; iTF_00550307; iTF_00555907; iTF_01055299; iTF_01364003; iTF_00580037; iTF_00492294; iTF_00593892; iTF_00612872; iTF_00541133; iTF_00617709; iTF_00594607; iTF_00491570; iTF_00485203; iTF_00488723; iTF_00489430; iTF_00505462; iTF_00524472; iTF_00478074; iTF_00490139; iTF_00561820; iTF_00613567; iTF_00533152; iTF_00563974; iTF_00566150; iTF_00804454; iTF_00480231; iTF_00615623; iTF_00587464; iTF_01554024; iTF_01552513; iTF_00579338; iTF_00914570; iTF_01559819; iTF_00595308; iTF_00916300; iTF_00488077; iTF_00609229; iTF_01553293; iTF_01551790; iTF_01555470; iTF_00539023; iTF_00606383; iTF_00531719; iTF_00915408; iTF_00251409; iTF_01320529; iTF_00518497; iTF_00472418; iTF_00473122; iTF_00478786; iTF_00542498; iTF_00589602; iTF_01321250; iTF_01356194; iTF_00528867; iTF_00531011; iTF_00537571; iTF_00616963; iTF_00501860; iTF_00516324; iTF_00553092; iTF_00509157; iTF_00550949; iTF_00564709; iTF_00523014; iTF_00588902; iTF_00614246; iTF_01321990; iTF_00533863; iTF_00549607; iTF_00508392; iTF_00519976; iTF_00554440; iTF_00601864; iTF_00556585; iTF_00598217; iTF_00582314; iTF_00586026; iTF_00475275; iTF_00476683; iTF_00540427; iTF_00567595; iTF_00569035; iTF_01324971; iTF_00493708; iTF_00512780; iTF_00585261; iTF_00803661; iTF_00513518; iTF_00538286; iTF_00557262; iTF_00806030; iTF_00510607; iTF_00526639; iTF_00534639; iTF_00586735; iTF_00495920; iTF_00532432; iTF_00919120; iTF_00572657; iTF_01327953; iTF_00520690; iTF_00530323; iTF_00553779; iTF_00470932; iTF_00506932; iTF_00522228; iTF_00570452; iTF_00493013; iTF_00608501; iTF_00490838; iTF_00519223; iTF_00547415; iTF_00557975; iTF_00568311; iTF_00499640; iTF_01323448; iTF_00598937; iTF_00541818; iTF_00546714; iTF_01327226; iTF_01556186; iTF_00506171; iTF_00610715; iTF_01322715; iTF_01324187; iTF_01570299; iTF_00577116; iTF_00583740; iTF_00595996; iTF_00616252; iTF_00548861; iTF_00551645; iTF_00802909; iTF_00498207; iTF_00599647; iTF_00805247; iTF_00525184; iTF_00562528; iTF_00563232; iTF_00575648; iTF_00501106; iTF_00525938; iTF_01551058; iTF_00614963; iTF_01023091; iTF_00475989; iTF_00477391; iTF_01165621; iTF_01426741; iTF_01548917; iTF_01557621; iTF_01558357; iTF_00502582; iTF_00573377; iTF_00544552; iTF_00509872; iTF_00545303; iTF_00559545; iTF_00571958; iTF_01231671; iTF_00655384; iTF_00600377; iTF_00601113; iTF_01044793; iTF_01559098; iTF_01554765; iTF_00590299; iTF_01088603; iTF_00515676; iTF_00561117; iTF_00917277; iTF_00481598; iTF_00486622; iTF_00503326; iTF_00612134; iTF_00618471; iTF_00523756; iTF_00571218; iTF_00591029; iTF_00584478; iTF_00602654; iTF_00604158; iTF_00555147; iTF_00891038; iTF_00890187; iTF_00891949; iTF_01051262; iTF_01358078; iTF_00992716; iTF_01505524; iTF_00797818; iTF_01549630; iTF_01325727; iTF_00566849; iTF_00521412; iTF_00511333; iTF_00558725; iTF_00593158; iTF_00497447; iTF_00832231; iTF_00583017; iTF_01326473; iTF_00535370; iTF_00528108; iTF_00500365; iTF_00552365; iTF_00597421; iTF_00607120; iTF_00496658; iTF_00482292; iTF_00498932; iTF_00576404; iTF_00517045; iTF_00609941; iTF_00560342; iTF_00619894; iTF_00901560; iTF_00514233; iTF_00485915; iTF_00574107; iTF_00543804; iTF_00495168; iTF_00474560; iTF_00514948; iTF_00603406; iTF_00611413; iTF_00904800; iTF_01319089;
90% Identity: iTF_00336808;
80% Identity: -