Basic Information

Insect: Chymomyza fuscimana
Gene Symbol: Hr39_1
Assembly: GCA_949987675.1
Location: OX465088.1:53856000-53860425[-]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.42 3.7e+03 -2.5 0.7 81 122 13 56 3 79 0.47

2 4 0.26 2.3e+03 -1.8 0.2 148 183 157 190 117 239 0.53

3 4 0.29 2.6e+03 -2.0 5.0 53 155 290 390 254 417 0.48

4 4 2.8e-99 2.5e-95 320.9 6.7 1 408 481 861 481 861 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.42	3.7e+03	-2.5	0.7	81	122	13	56	3	79	0.47
2	4	0.26	2.3e+03	-1.8	0.2	148	183	157	190	117	239	0.53
3	4	0.29	2.6e+03	-2.0	5.0	53	155	290	390	254	417	0.48
4	4	2.8e-99	2.5e-95	320.9	6.7	1	408	481	861	481	861	0.86

Sequence Information

Coding Sequence: atgccCAATATGTCAAGCATAAAGACGGAGCAGACTCCGTCAACCGCTAACAACCGCAGCAGTGGCACCAGCAGCTATCAGCTACCAGTCAATATGTCCACGACGACAACGTCCTCGGGTTCAACACCCATTAGTAACACACGGCACAATGTCTCTGTGACGAATATCAAGTGTGAGCTAGATGAGCTGCCCACGCCAAATGGAAATCTGGTGCCAGTTATAGCTAACTATAACGGCTTGAGCGGGGCGGGACCGCCCCATCATGGAAGTCTACGTATACCACTAAGCGGCAAAGCAGAGGATTCCGACTCCGAAGCTGAGCTAACCAATATTGAGAATTTAAAGGTGCGCCGTCGTGCAGCCGATAAGAACGGACCACGACCCATGTCCTGGGAGGGTGAGCTTAGCGAACCGGAGACCACGGAAACGGAGCTAATGGAAACGGATACATTAAGCAATGGCATAGGCGTTTCGGTCATCAAAAGCGAGGCCACCACAACCACACCGTCGGTTTGCAGCGGCGCAATGCCGACTGGCATGCTGCAGCCCATTAAGACAGAGTTGGAGCACATTGCCGGTGAAATGCAGCAGAACAAGTTGTACGGTAGTTCGGCGACAAACACGTCGACGACGGGAGCTAATACACCTGCTAAGCTGAAGCTTGCACCCACTCAAAGCGATCCCATTAATCTCAAGTTTGAACCGGCGTTGACTGGTGGCTCGGGCAGCGCTCTGGGCGTAACCGGCGATAACTCACCGCTGCTGATGACGCGCAACAAGTCCAACAGCGGTGGCCATTTGCCGCTGCCTGCCAATCCCAGTCCAGACTCCGCCATACATTCCGTCTATACGCACAGCTCGCCATCGCAGTCGCCGCTGACGTCGCGTCACGCCCCCTATACGCCTTCTTTAAGCCGTAACAACAGCGATGCTTCGCACAGCTCCTGCTATTCCTACAGCTCAGAATTTAGTCCCACACACTCCCCAATACAGGCACGTCATGCGCCGCCAGCGGGCGCATTATATCCAACAGGCTATGCCAATGGTGGCATGCATCCTCATAGCGTGTTATATAGGCCGCTAAATGTGGAAGCCGGTAGCCAGGAGGCACAAAATCTCAGCATGGATGCCAGCAGTTCAACGTCAAACACAAGCACTGGAGCGGCATTCGATGCGTCTGGTTTGCCAGCCTCGCCTGCAGGCATCTCCCGTCAGCAGCTCATTAACTCGCCGTGTCCCATTTGCGGCGATAAAATATCTGGCTTCCATTATGGCATCTTCTCCTGCGAGTCCTGCAAAGGTTTCTTTAAGCGCACCGTGCAGAATCGCAAGAACTATGTATGCGTGCGTGGTGGTCCCTGCCAAGTGAGCATATCTACACGCAAGAAGTGTCCAGCCTGCCGGTTTGAGAAGTGTCTCCAGAAAGGTATGAAACTGGAGGCCATACGTGAGGATCGCACGCGTGGCGGGCGCTCCACCTATCAATGCTCCTATACACTGCCCAATGCCATGCTCAGTCCGCTGCTAAGTCCGGATCAGGCAGCGGCAGCTGCGGCGGCAGCGTCTGCAGCAGCGGTGGCGGCCAATCAGCaccagcagctgcaacaacaacagcatcagcGACTACATCAGCAACATGGACTCAATGGTTTTGGCAGCGGAGGTTCCACATCGTTGCCGTCTAGCCCCAGTTTGGGCGCATCAATCAAAACTGAGCAGACGGATTCGGCTGGTGGTCATTTGCCAAGGGCAGCCAGCATACCAACGTTATTGCAGGAAATCATGGATGTTGAACATCTCTGGCAATACACAGATGCTGAACTGGCACGCATTAATCAGCCACTGTCCTCTTTTGCCTCTGGATCCACTTCTGCTACCGCCAACGGTGAAAGCGGCTCTGCAGCGAATCAAAGCCCACAACACACTGCCAATGCACAACAAATGACCAATCCACTGCTGGCCAGTGCTGGTCTCTCATCAAATGGTGAGAATGCCAATCCCGATCTTATTGCTCATCTCTGCAATGTTGCCGATCATCGTCTGTACAAGATTGTCAAGTGGTGCAAGAGTTTGCCGCTATTTAAGAATATTTCGATCGATGATCAGATTTGTTTGCTCATTAATTCCTGGTGTGAGTTGCTGTTATTCTCCTGCTGTTTTCGCTCCATTGATACGCCTGGCGAGATAAAGATGTCACAAGGTCGTAAGATAACGCTGTCGCAGGCGAAGACAAATGGTTTGCAGGCCTGCATCGAACGAATGCTCAATCTGACAGATCATTTGAGACGATTACGCGTTGATCGCTATGAATATGTTGCCATGAAGGTCATAGTGCTGCTGCAGTCCGATACCTCGGAGCTGCATGAGCCCGTCAAAGTGCGTGAGTGCCAGGAGAAGGCATTGCAAAGCTTGCAAGCGTATACGCTCGCACACTATCCCGATGCGCCGTCCAAATTTGGGGAACTTTTGCTACGCATTCCCGATCTCCAACGCACGTGTCAGCTGGGCAGAGAGATGCTGACCATCAAGACACGAGATGGAGCcgattttaatttgttaatggAACTGCTACGCGGAGAACATTGA
Protein Sequence: MPNMSSIKTEQTPSTANNRSSGTSSYQLPVNMSTTTTSSGSTPISNTRHNVSVTNIKCELDELPTPNGNLVPVIANYNGLSGAGPPHHGSLRIPLSGKAEDSDSEAELTNIENLKVRRRAADKNGPRPMSWEGELSEPETTETELMETDTLSNGIGVSVIKSEATTTTPSVCSGAMPTGMLQPIKTELEHIAGEMQQNKLYGSSATNTSTTGANTPAKLKLAPTQSDPINLKFEPALTGGSGSALGVTGDNSPLLMTRNKSNSGGHLPLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQARHAPPAGALYPTGYANGGMHPHSVLYRPLNVEAGSQEAQNLSMDASSSTSNTSTGAAFDASGLPASPAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNAMLSPLLSPDQAAAAAAAASAAAVAANQHQQLQQQQHQRLHQQHGLNGFGSGGSTSLPSSPSLGASIKTEQTDSAGGHLPRAASIPTLLQEIMDVEHLWQYTDAELARINQPLSSFASGSTSATANGESGSAANQSPQHTANAQQMTNPLLASAGLSSNGENANPDLIAHLCNVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSIDTPGEIKMSQGRKITLSQAKTNGLQACIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSDTSELHEPVKVRECQEKALQSLQAYTLAHYPDAPSKFGELLLRIPDLQRTCQLGREMLTIKTRDGADFNLLMELLRGEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00335929;
90% Identity: iTF_00336800;
80% Identity: iTF_00338393;