Basic Information

Insect: Chymomyza costata
Gene Symbol: Hr39_1
Assembly: GCA_018150985.1
Location: JAECWU010000257.1:93525-135513[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.36 3.3e+03 -2.8 1.0 83 118 14 51 3 80 0.44

2 4 0.23 2.1e+03 -2.2 0.1 131 183 139 189 127 221 0.69

3 4 1.9 1.8e+04 -5.2 5.9 53 129 289 364 264 413 0.45

4 4 1.4e-91 1.3e-87 294.9 5.0 1 408 480 862 480 862 0.79

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.36	3.3e+03	-2.8	1.0	83	118	14	51	3	80	0.44
2	4	0.23	2.1e+03	-2.2	0.1	131	183	139	189	127	221	0.69
3	4	1.9	1.8e+04	-5.2	5.9	53	129	289	364	264	413	0.45
4	4	1.4e-91	1.3e-87	294.9	5.0	1	408	480	862	480	862	0.79

Sequence Information

Coding Sequence: ATGCCCAATATGTCAAGCATAAAGACGGAGCAGACTCCGTCAACCGCTAACAGCAGCAGTGGCACCAACAGCTATCAGCTACCAGTCAACATGTCCACGACGACGACGTCCTCGGGTTCAACAGCCATCAGTAACACACGGCACAATGTCTCTGTGACGAATATCAAGTGTGAGTTGGATGAGCTGCCCACGCCAAATGGAAATCTGGTGCCAGTTATAGCTACCTATAACGGTTTGAGTGGGGCGGGACCGCCCCATCGTGGAAGTCTACGCATACCACTAAGCGGCAAAGCAGAGGATTCCGACTCCGAAGCTGAGCTAACCAATATTGAGAATTTAAAGGTGCGCCGTCGTGCAGCCGATAAGAACGGACCACGACCCATGTCCTGGGAGGGTGAGCTTAGCGAACCGGAGACCACGGAAACAGAGCTAATGGAAACGGATACATTAAGCAATGGCGTAGGCGTTTCGGTCATCAAAAGCGAGGCCACCACAACCACGCCCTCAGTTTGCAGCGGCGCAATACCGACTGGCATGCTGCAGCCCATTAAGACAGAGTTGGAGCACATTGCCGGTGAAATGCAGCAGAACAAGTTGTACGGTAATTCGGTGACAAATACGTCGACGACGGGAGCTAATACACCTGCTAAGCTGAAGCTTGCACCCACTCAAAGCGATCCCATTAATCTCAAGTTTGAACCGGCGTTGACTGGTGGCTCGGGCAGCGCTCTGGGCGTAACCGGCGATAACTCACCGCTCCTAACGACGCGCAACAAGTCCAACAGCGGTGGCCATTTACCGCTGCCTGCCAATCCCAGTCCAGACTCCGCCATACATTCCGTCTATACGCACAGCTCGCCATCGCAGTCGCCGCTAACGTCGCGTCACGCCCCCTATACGCCTTCTTTAAGCCGTAACAACAGCGATGCTTCGCACAGCTCCTGCTATTCCTACAGCTCAGAATTTAGTCCCACACACTCGCCAATACAGGCACGTCATGCGCCGCCAGCGGGCGCATTATATCCAACAGGCTATGCCAATGGTGGCATGCATCCTCATAGCGTGTTATATAGGCCGCTAAATGTGGATGCCGGTGGCCAGGAGGCACAAAATCTCAGCATGGATGCCAGCAGTTCAACGCCAAACACAAGCACTGGACCGGCATTCGATGCGTCTGGTTTGCCAGCCTCGCCTGCAGGCATCTCCCGTCAGCAGCTCATTAACTCGCCGTGTCCCATTTGCGGCGATAAAATATCTGGCTTCCATTATGGCATCTTCTCCTGCGAGTCTTGCAAAGGCTTCTTTAAGCGCACCGTGCAGAATCGCAAAAACTACGTGTGCGTGCGTGGTGGTCCCTGCCAAGTGAGCATTTCCACACGTAAGAAGTGTCCGGCCTGCAGGTTTGAGAAATGTCTTCAGAAAGGCATGAAACTGGAGGCCATACGTGAGGATCGCACGCGTGGCGGGCGCTCCACCTATCAATGCTCCTATACACTGCCCAATACCATGCTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCACATCGTTGCCATCTAGCCCCAGTTTGGGCGCATCCATCAAAACTGAGCAGACGGATACGGCTGGTGGTCATATGCCAAGGGCAGCCAGCATACCAACGTTATTGCAGGAAATCATGGATGTTGAACATCTCTGGCAATACACAGATGCTGAACTGGCACGCATTAATCAGCCACTGTCCTCTTTTGCCTCCGGATCCACTTCAGCTTCCGCCAACGGTGAAAGCGGCTCTGCAGCGAATCAAAGCCCACAACACACTGCCAATGCACAACAAATGACCAATCCACTGCTGGCCAGTGCTGGTCTATCATCAAATGGTGAGAATGCCAATCCCGATCTTATTGCTCATCTCTGCAATGTTGCCGATCATCGTCTATACAAAATTGTCAAATGGTGCAAGAGTTTGCCGTTGTTTAAGAATATTTCGATCGATGATCAGATTTGTTTGCTCATTAATTCCTGGTGTGAGTTGCTGTTATTCTCCTGCTGTTTTCGCTCCATTGATACGCCTGGCGAGATTAAGATGTCACAAGGTCGTAAGATAACGCTGTCGCAGGCGAAATCAAATGGTTTGCAGGCCTGCATCGAACGTATGCTCAATCTGACAGATCATTTGAGACGTTTACGCGTTGATCGCTATGAATATGTTGCCATGAAGGTCATAGTGCTGCTGCAGTCCGATACATCGGAGCTGCATGAGCCCGTCAAAGTGCGTGAGTGCCAGGAGAAGGCATTGCAAAGCTTGCAAGCGTATACGCTCGCACATTATCCCGATGCGCCGTCCAAATTTGGGGAACTATTGCTACGCATACCCGATCTCCAACGCACGTGTCAGCTGGGCAGAGAGATGCTGACCATCAAGACACGAGATGGAGCCGATTTTAATTTGTTAATGGAGCTGCTACGCGGAGAACATTGA
Protein Sequence: MPNMSSIKTEQTPSTANSSSGTNSYQLPVNMSTTTTSSGSTAISNTRHNVSVTNIKCELDELPTPNGNLVPVIATYNGLSGAGPPHRGSLRIPLSGKAEDSDSEAELTNIENLKVRRRAADKNGPRPMSWEGELSEPETTETELMETDTLSNGVGVSVIKSEATTTTPSVCSGAIPTGMLQPIKTELEHIAGEMQQNKLYGNSVTNTSTTGANTPAKLKLAPTQSDPINLKFEPALTGGSGSALGVTGDNSPLLTTRNKSNSGGHLPLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQARHAPPAGALYPTGYANGGMHPHSVLYRPLNVDAGGQEAQNLSMDASSSTPNTSTGPAFDASGLPASPAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNTMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSLPSSPSLGASIKTEQTDTAGGHMPRAASIPTLLQEIMDVEHLWQYTDAELARINQPLSSFASGSTSASANGESGSAANQSPQHTANAQQMTNPLLASAGLSSNGENANPDLIAHLCNVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSIDTPGEIKMSQGRKITLSQAKSNGLQACIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSDTSELHEPVKVRECQEKALQSLQAYTLAHYPDAPSKFGELLLRIPDLQRTCQLGREMLTIKTRDGADFNLLMELLRGEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00335929;
90% Identity: iTF_00336800;
80% Identity: iTF_00337584;