Basic Information

Insect: Chymomyza amoena
Gene Symbol: ftz-f1
Assembly: GCA_037043745.1
Location: JBAMAX010003544.1:10014-26211[-]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 0.14 1.7e+03 -1.4 14.6 43 110 87 148 11 168 0.48

2 3 1.2e-19 1.4e-15 58.1 0.6 1 80 318 396 318 417 0.75

3 3 4.6e-71 5.6e-67 227.4 1.3 150 408 508 759 489 761 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	0.14	1.7e+03	-1.4	14.6	43	110	87	148	11	168	0.48
2	3	1.2e-19	1.4e-15	58.1	0.6	1	80	318	396	318	417	0.75
3	3	4.6e-71	5.6e-67	227.4	1.3	150	408	508	759	489	761	0.91

Sequence Information

Coding Sequence: atgttATTCAAAATGGAGCCACAACAAGCGACAGTTCAATTTATCTCGTCGCTAAATATGTCGCCTTTTTCCATGCAGCTGGATCAGCAACCAGCTAGTCCAGCCCTGGCCAgcaatcagcagcagcagcagagcggcggcggtggcagcagcagcagcaacaataacaatgataACGATAACAATACATTAAGCAATTCCGATAACGATTACAGCGCTTATACGCTGCAGCTGAGCGGCAGCAATCAGACAcatcaccagcagcagcagcaacaacaacatcatacACATCACCAGCATCAGCAGCATCAGCAACAgaaccaccaacaacaacaacattaccaacaacaacagcaggagcagcagcaacagaatATTGCCAACAACTCCAATCAATTCAACTCCTCATCCTACTCGTATATATACAATTTCGATTCACAGTATATATTCCCGACAGGCTACCAGGACACCACTTCCTCGCATTCACAGCAAAgcggtggtggcggcggcaGTGGCTCCGCAGCCGGTGGCAGCACCGGCAATGTAGCACTACTAAAtggcagctctggcaatgctGGCGGTGGCTCTGGCTATATGCTCCTGCCGCCTGCCAGCAGCTCAAGCGGTCATATATCCGGTAGTGTTGGCGGTGGCGGTGCTGGTGGTGGTGGCCATGGCGGCACCAGTGCCACCTCCGGTGTTAGCGGTGAAGCCATTGACTTTAAGCATCTCTTTGAGGAGCTCTGTCCCGTCTGTGGCGACAAAGTGAGCGGCTATCACTATGGCCTGCTCACGTGTGAGTCCTGCAAGGGCTTCTTCAAACGTACGGTACAAAACAAGAAGGTCTACACTTGTGTTGCGGAACGTTCCTGCCACATTGATAAGACGCAGCGAAAGCGTTGTCCGTATTGCCGATTCCAAAAATGCTTGGAGGTGGGCATGAAACTGGAAGCTGTTCGAGCGGATCGCATGCGAGGTGGACGGAATAAATTTGGACCCATGTACAAACGGGATCGTGCGCGAAAATTGCAAGTTATGCGTCAGAGACAGCTGGCGCTGCAGGCATTACGCAGTTCCATGGGTCCGGACATAAAGCCCACGCCGCTTTCACCGGGCTATCAGCAAGCATATCCAAATATGAATATTAAGCAAGAAATACAAATACCTCAGGTATCCTCACTCACGCAATCGCCGGACTCATCGCCCAGCCCCATAGCCATCGCCTTGGGTCAGGTGAATGCCAGCACGGGCGGCGTGATAGCGACACCCATGAATGGTGGCGGAGTTGGAGGCGGCggtggcaatggcaatggcggCTCTGTGGGCAACGGcaatagcaataacaacagcagcagcggagCTGGCGGAGGTggaggcggcggcggtggcaaTGCTGGCGGCAATAACAATAGCGGTGATAGCCTGCAACGCAATGGAGGAGGCAATggcagcggcagtggcagcGGCTGTCATGAAACTGGCACTGGATCTCTGCAGAATACAGCCGAATCGAAATTGTGCTATGATTCCGGCACACATCCATCGAGCACAGCCGATTCGCTTATCGAACCATTAAGGGTCTCGCCGATGATACGTGAGTTTGTGCAATCGATCGATGATCGGGAATGGCAAACGCAATTGTTTGCGCTTCTGCAAAAGCAAACGTACAATCAAGTTGAAGTGGATCTCTTTGAGCTAATGTGCAAAGTGCTCGATCAGAATTTGTTCTCACAAGTGGATTGGGCAAGGAACACCGTCTTCTTTAAGGATTTGAAGGTGGACGATCAAATGAAGCTGTTACAACACTCTTGGTCCGATATGCTTGTACTAGATCATCTGCATCATCGAATACATAATGCGCTGCCGGATGAAACGCAGCTCAACAATGGTCAGGTCTTTAATCTGATGAGTTTGGGCCTGTTGGGCGTGCCGCAGTTGGGCGATTACTTTAATGAACTGCAAAATAAGCTGCTGGACTTAAAGTTCGATATGGGCGATTATGTATGCATGAAATTCCTAATCTTGTTGAATCCAGATGTGCGTGGCATTATTAACAAGAAGACCGTCTTGGAGGGTCATGAAAATGTGCAGGCAGCTTTATTGGATTACACGCTGACGTGTTATCCCTCAGTGCATGAAAAATTCAGGAGGCTATTGAACATACTACCGGAAATACACGCCATGGCGTCGCGAGGCGAGGAACATCTGTACTCCAAGCATTGTGCAGGCAGTGCGCCAACTCAGACGCTGCTAATGGAAATGTTGCATGCCAAGCGAAAGGTATAA
Protein Sequence: MLFKMEPQQATVQFISSLNMSPFSMQLDQQPASPALASNQQQQQSGGGGSSSSNNNNDNDNNTLSNSDNDYSAYTLQLSGSNQTHHQQQQQQQHHTHHQHQQHQQQNHQQQQHYQQQQQEQQQQNIANNSNQFNSSSYSYIYNFDSQYIFPTGYQDTTSSHSQQSGGGGGSGSAAGGSTGNVALLNGSSGNAGGGSGYMLLPPASSSSGHISGSVGGGGAGGGGHGGTSATSGVSGEAIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQVMRQRQLALQALRSSMGPDIKPTPLSPGYQQAYPNMNIKQEIQIPQVSSLTQSPDSSPSPIAIALGQVNASTGGVIATPMNGGGVGGGGGNGNGGSVGNGNSNNNSSSGAGGGGGGGGGNAGGNNNSGDSLQRNGGGNGSGSGSGCHETGTGSLQNTAESKLCYDSGTHPSSTADSLIEPLRVSPMIREFVQSIDDREWQTQLFALLQKQTYNQVEVDLFELMCKVLDQNLFSQVDWARNTVFFKDLKVDDQMKLLQHSWSDMLVLDHLHHRIHNALPDETQLNNGQVFNLMSLGLLGVPQLGDYFNELQNKLLDLKFDMGDYVCMKFLILLNPDVRGIINKKTVLEGHENVQAALLDYTLTCYPSVHEKFRRLLNILPEIHAMASRGEEHLYSKHCAGSAPTQTLLMEMLHAKRKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00337557;
90% Identity: iTF_00338397;
80% Identity: iTF_00335959;