Camo002860.1
Basic Information
- Insect
- Chymomyza amoena
- Gene Symbol
- Mblk-1
- Assembly
- GCA_037043745.1
- Location
- JBAMAX010000723.1:369016-382625[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.4e-11 3.5e-08 33.5 0.0 1 35 37 72 37 79 0.92 2 3 6.8e-19 1.7e-15 56.9 0.0 1 43 500 543 500 545 0.95 3 3 0.29 7.2e+02 0.4 0.1 16 30 659 673 652 674 0.87
Sequence Information
- Coding Sequence
- ATGTGGCGGGCGGCCTGGTTGGCGCTGCTTGCTTGGTTGGGCACCCACCCACTGCTGGGGACAATATCAGAGTGTGCCACGCCCATACCCGCAGCAAGGCGTAGCTACAGTGAGGATGATCTGCAGAGCGCTGTTCAGGACGTGCTGGACCACAAGGTGGGCACACGCAAGGCGGCCAGCCAATACAATGTGCCGCGCTCCACGTTGCGCAACAAGCTGCACAAGATTCAAGCCAAACGCGGCATTGAGCTGTCACATGATCTGGATCTGGATCAGGATGACTCGGCAGATGAGTGTGACGACAGCAATGCCTCAACGCCAGTGTACTCCGACTTTGCGCAACGCATAGCAGCCAGCGCGCAGCTGCGCAAGCTAAGCGGTCTGTCCGAGAACAATGGCAGCGATCTGGGCGAGGATCTAGAGCACAGACAGAGCGGCACATCGCCCGGTCTGCGCGCAGAAAGCGGCACACCTTTGCCCAGCAGCGCTGCGACCGCGGGCAGCAATGCTGCTATAGATCCCAATGTGCTGCTACGCACGCTTATGCTGGCCACCGGCATTGGTGTCATGCCCAAGCTGGACGAGAATCAGACGATAGGTGAGCTATTTAAGACGGTGCTGCTGGCCAGTAGTGGCAATTCGTTTATAAACGGCGCCTTTGCCAATGCGGCCGTGGCCATGAATGCCAATGCCGCCATGTCAACGGCGGATACTAATATGCTGCAAAATGGCCAAGGCGCTGGCATCTATGATCAGCATCTGTTGctgcaacagctgcagcagcagcagcaacagcatcaCCAGCAatcccagcagcagcagcagctgagcgTCAATAGCTATCGACATCGTCTACCAAAGTCTGATACACCGGAGACCACCTCATCGCTGGATACTAACGAGGCCTGTGATGATCCCATACTGAAGATTCCGTCCTTCAAGGTTAGCGGCCCCTCAAGTGTTTCACCCTCGCTCTCGAGCtgcctcaacaacaacaataataacagCAACTGCAACAGCAATCGCAATGGCGGCGCTGGGGATCAGCGTCCTCATTCTTTGTCACCCATGCTGTCCGCTGCTGTGGGCGGTGCGCCCGGTTTCCGGCCGCTCAGCTCATCGCCTACGGCCATACAAAAAATGATGGCCAATACCATACATCGCAAGATTAATGAGCAGAGCAGTCAGGAGGCCGCCATGTTGGGACTCGGCCTGGATGCCTGCCACAAGCGCAACAATGGCAACACCAGCGGCAGCgagtgcagcagcagcggcgtcCTGAATgtcaacagcagcggcagctacAAAAAGCCCAGCATCAGCGTGGCCAAGGTGGTGGGCGGCACGGATACCTCACGCTTTGGCGCCTCACCCAATCTGCTGGCACAGCAGCATCACCTGCCCACGCATCATGCGCATCAGCTGAGCGCGCAGGATGCAGCAGCGCTGGCCGCCGGCAAGGGCACGCGTCCCAAACGCGGCAAGTATCGCAACTATGATCGGGATAGTCTGGTGGAGGCGGTCAAGGCGGTGCAGCGCGGCGAGATGAGCGTGCATCGTGCGGGCAGCTACTATGGCGTGCCACACTCAACGCTGGAGTACAAAGTCAAGGAGCGGCATTTGATGCGTCCGCGTAAACGTGAGCCCAAGCCACAGCCGGATTTGGTGGGTCTGACGGGCGCAGCCGGTAAACTTAATCCCGCCAATCTGGTAGCCGGTAGTAATCATATGGACAAGCTTAAGGCCAGCGGCAGCAGCGCCAATTCCAAGCTGAGCAATGCGCTTAAAAACAATAGTCAAAGCATGGGCGTGGTGGGTGCTGGCGGAGTGCCACCCAATGGAATGAAGCTGCCCATGTTTGAGGCAGCCGGACAGCTGCCGTTTCAGCAAAGCATGTTCTGGCAATCGGCGGGTATTTTGGATGCCATGCGTCTAAATGCGAGCAATCCCAATGCTATGGTCAATGCCAGCGCACAGCTGAGTCAGCAGCATGCTCCACATGCTCACGGCATGCCGCACAAGGGCGCGCTGGAGTTCCAGGAGAGCGTCTACGATAATATTATACGCAAAAAACTGCAGAGCAATGAGGGCAATGGCATTGCGCTGCTGGATCAGCTGCTGGTCAATAAGACACCGCTGCCGTTTACCAATAATCGCAGCAATGAATATGTGTCCACGCCCACCTGCTCCACGGGCGCCAGcgaagcagctttgctggcagCCAAACGTTTGGGCAGCCCCATGGAAGCCTATGCGGATATCAAGCGTGAACGTTTAAGTCCGGagagcggcggcggcagcagcagcagtggcgaGGATGAGCATGtgaccagcaacaacaacaacaataacaacagcgaGTCGgcgcacaacaaaaacaagagcagcagcagcgccagcaaTAAGTGCAAcaatggcagcagcaacaacggaCGCAGTCGCATGACGTCACGCGACTCCGAAACCGATGCCAGCAGCTTTAAGAGCGAACACTCCGAGCTCAGTCTGGCTGCTgcgcacaacaacaaaatgatggATCtcaatggcagcagcagcaaacatcAGGCAGCTGAGGCTACTACCCTAATGGAAGCCTCACCCAGCTCATCCATATTGCATGAGAAGCTGGCGCAGATCAAGGCCGAGCAGGAATGTCCCAGCGTGGCCGAGGAGCACTTATAG
- Protein Sequence
- MWRAAWLALLAWLGTHPLLGTISECATPIPAARRSYSEDDLQSAVQDVLDHKVGTRKAASQYNVPRSTLRNKLHKIQAKRGIELSHDLDLDQDDSADECDDSNASTPVYSDFAQRIAASAQLRKLSGLSENNGSDLGEDLEHRQSGTSPGLRAESGTPLPSSAATAGSNAAIDPNVLLRTLMLATGIGVMPKLDENQTIGELFKTVLLASSGNSFINGAFANAAVAMNANAAMSTADTNMLQNGQGAGIYDQHLLLQQLQQQQQQHHQQSQQQQQLSVNSYRHRLPKSDTPETTSSLDTNEACDDPILKIPSFKVSGPSSVSPSLSSCLNNNNNNSNCNSNRNGGAGDQRPHSLSPMLSAAVGGAPGFRPLSSSPTAIQKMMANTIHRKINEQSSQEAAMLGLGLDACHKRNNGNTSGSECSSSGVLNVNSSGSYKKPSISVAKVVGGTDTSRFGASPNLLAQQHHLPTHHAHQLSAQDAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAAGKLNPANLVAGSNHMDKLKASGSSANSKLSNALKNNSQSMGVVGAGGVPPNGMKLPMFEAAGQLPFQQSMFWQSAGILDAMRLNASNPNAMVNASAQLSQQHAPHAHGMPHKGALEFQESVYDNIIRKKLQSNEGNGIALLDQLLVNKTPLPFTNNRSNEYVSTPTCSTGASEAALLAAKRLGSPMEAYADIKRERLSPESGGGSSSSGEDEHVTSNNNNNNNSESAHNKNKSSSSASNKCNNGSSNNGRSRMTSRDSETDASSFKSEHSELSLAAAHNNKMMDLNGSSSKHQAAEATTLMEASPSSSILHEKLAQIKAEQECPSVAEEHL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00338253; iTF_00337439;
- 90% Identity
- iTF_00338253;
- 80% Identity
- -