Cfus009515.1
Basic Information
- Insect
- Chymomyza fuscimana
- Gene Symbol
- Mblk-1
- Assembly
- GCA_949987675.1
- Location
- OX465088.1:140257785-140261078[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.9e-11 3.6e-08 33.5 0.0 1 35 20 55 20 62 0.92 2 3 9.3e-19 1.7e-15 56.9 0.0 1 43 486 529 486 531 0.95 3 3 0.0055 10 6.4 0.1 16 30 645 659 638 660 0.89
Sequence Information
- Coding Sequence
- ATGATTTGGACAATATCAGAGTGTGCCACGCCTATACCCGCAGCAAGGCGTAGCTACAGCGAGGATGATTTGCAGAGCGCTGTTCAGGATGTGCTGGACCACAAGGTGGGCACACGCAAAGCAGCCAGCCAATACAATGTGCCGCGCTCCACGCTGCGCAACAAACTGCACAAGATTCAAGCCAAACGCGGCATTGAGCTGTCACATGATCTGGATCTAGATCAGGATGACTCGGCGGATGAATGTGACGACAGCAATGCCTCAACGCCAGTGTACTCCAACTTTGCGCAACGCATAGCAGCCAGCGCGCAGCTGCGCAAGCTAAGCGGTCTGTCCGAGAACAATGGCAGTGAACTGGGTGAGGAACTAGAGCATAGACAGGGCGGCACATCACCCAGTCTACGCACAGAAAGCGGCACACCTCTGGCCAGCAGCGCTGCGATCGCTGGCAGCAACGCTGCTATTGATCCCAATATGCTGCTACGCACGCTTATGCTGGCGACCGGCATTGGAGTCATGCCCAAGCTGGACGAGAATCAGACGATAGGTGAGCTCTTTAAGTCGGTGCTGCTGGCCAGTAGTGGCAATTCGTTCATTAATGGCGCCTTTGCCAATGCGGCAGTGGCCATGAATGCCAATGCCATGTCAACGGCGGATACTAACATGCTGCAAAATGGCACAGGCGCTGGCATCTATGATCAGCATCTGCTGCtgcaacagctgcagcagcagcaacatcagcagcagcagcatcatcagcaATCCCAACAGCAGCAGTTGAGCGTCAACAGCTATCGGCATCGTCTACCAAAGTCTGATACACCAGAGACCACCTCATCGCTGGATACTAACGAGGCCTGTGATGATCCCATACTGAAGATTCCGTCCTTCAAGGTTGGTGCCTCAAGTGTTTCACCCTCGCTCTCGAGCTGCctcaacaacaataataacaacaataataatagcaaCAGCAACTGCAACAGCAATCGCAATGGAGGCGCAGGCGACCAGCGTCCACATTCTCTTTCACCCATGCTGTCCGCTGCGGTGGCAGCAACGGCTTTCCGGCCGCTCAGCTCTTCGCCTACCGCTATACAAAAAATGATGGCCAATACAATACATCGCAAGATTAATGAGCAGAGCAGTCAGGAGGCAGCCATGTTGGGACTCGGCCTGGATGCCTGCCACAAGCGCAACAATGGCAACACCAGCGGCAGCgagtgcagcagcagcggccTGAATgccaacagcagcggcagctatAAAAAGCCCAGCATAAGCGTGGCCAAGGTGGTGGGCGGCACGGATACCTCACGCTTTGGCGCCTCACCCAATCTGCTGGCACAGCAGCATCACCTGCCCACGCATCATGCGCATCAGCTGAGCGCGCAGGATGCAGCAGCGCTGGCAGCCGGCAAGGGTACGCGTCCCAAACGCGGCAAGTATCGCAACTATGATCGGGATAGTCTGGTGGAGGCGGTCAAGGCTGTGCAGCGCGGCGAGATGAGCGTGCATCGTGCGGGCAGCTACTATGGCGTGCCGCACTCTACGCTGGAGTACAAAGTCAAGGAGCGGCATTTGATGCGTCCACGCAAACGTGAGCCCAAGCCACAGCCGGATTTGGTGGGTCTGACGGGCGCAGCCAATAAACTTAATCCCGCCAATTTGGTAGCCGGCAATAATCATTTGGACAAGCTTAAGGCCAGCAGCAGCGGCGCCAATTCCAAGCTGAGCAATGCGCTTAAAAACAATAGTCAAAGCATGGGTGTGGTAGGTGCTGCCGGCGTGCCGCCTAACGGCATGAAGCTGCCCATGTTTGAGGCAGCCGGACAGCTGCCTTTTCAGCAAAGCATGTTTTGGCCACCGGCGGGTCTGTTGGATGCCATGCGCCTAAATGCGAGCAATCCCAATGTAATGGCCAATGCCAGCGCACAGCTAAGTCAGCAGCATGCTGCACATGCTCATGGCATGCCGCACAAGGGCGCGCTAGAGTTCCAGGAGAGCGTTTACGATAATATTATACGCAAAAAACTGCAGAGCAATGAGGGCAATGGCAATGCGCTGCTGGATCAGCTGCTGGTCAATAAGACACCGCTGCCGTTTACCAATAATCGCAGCAATGAATATGCGACGGCGCCCACCTGCTCCACGGGAGGCAGCGAGACAGCACTGCTGGCAGCCAAACGTTTGGGCAGTCCCATGGACGCCTATGCGGATATAAAGCGTGAGCGTTTAAGTCCGATGAGCGgcggtggcagcagcagcagcagcggcgagGACGAGCATGtggccagcaacaacaacaacaataacaacagcgaGTCGgcgcacaacaaaaacaagagcagcagcagcgccagcaATAAGTGCAAcaatggcagcagcaacaacggaCGCAGTCGCATGACGTCACGCGACTCCGAAACCGATGCCAGCAGCTTTAAGAGCGAACACTCCGAGCTCAGTCTGGCTGCTgcgcacaacaacaaaatgatgGATCtcaatggcagcagcagcaaacatcAGGCAGCTGAGGCTGCCACTATGGAAGCCTCACCCAGCTCATCCATATTGCATGAGAAGCTGGCGCAGATCAAGGCCGAGCAGGAATGTCCAAGTGTGGCCGAGGAGCACTTATAG
- Protein Sequence
- MIWTISECATPIPAARRSYSEDDLQSAVQDVLDHKVGTRKAASQYNVPRSTLRNKLHKIQAKRGIELSHDLDLDQDDSADECDDSNASTPVYSNFAQRIAASAQLRKLSGLSENNGSELGEELEHRQGGTSPSLRTESGTPLASSAAIAGSNAAIDPNMLLRTLMLATGIGVMPKLDENQTIGELFKSVLLASSGNSFINGAFANAAVAMNANAMSTADTNMLQNGTGAGIYDQHLLLQQLQQQQHQQQQHHQQSQQQQLSVNSYRHRLPKSDTPETTSSLDTNEACDDPILKIPSFKVGASSVSPSLSSCLNNNNNNNNNSNSNCNSNRNGGAGDQRPHSLSPMLSAAVAATAFRPLSSSPTAIQKMMANTIHRKINEQSSQEAAMLGLGLDACHKRNNGNTSGSECSSSGLNANSSGSYKKPSISVAKVVGGTDTSRFGASPNLLAQQHHLPTHHAHQLSAQDAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKLNPANLVAGNNHLDKLKASSSGANSKLSNALKNNSQSMGVVGAAGVPPNGMKLPMFEAAGQLPFQQSMFWPPAGLLDAMRLNASNPNVMANASAQLSQQHAAHAHGMPHKGALEFQESVYDNIIRKKLQSNEGNGNALLDQLLVNKTPLPFTNNRSNEYATAPTCSTGGSETALLAAKRLGSPMDAYADIKRERLSPMSGGGSSSSSGEDEHVASNNNNNNNSESAHNKNKSSSSASNKCNNGSSNNGRSRMTSRDSETDASSFKSEHSELSLAAAHNNKMMDLNGSSSKHQAAEAATMEASPSSSILHEKLAQIKAEQECPSVAEEHL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00335799;
- 90% Identity
- iTF_00335799;
- 80% Identity
- -