Cfes044188.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Chrysotoxum festivum
Gene Symbol
-
Assembly
GCA_963931855.1
Location
OZ007556.1:92586274-92593955[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 0.0017 0.46 12.8 0.3 1 23 115 138 115 138 0.95
2 14 0.00016 0.042 16.1 0.3 3 23 145 166 144 166 0.94
3 14 8.4e-06 0.0022 20.1 2.8 2 23 177 199 176 199 0.96
4 14 0.00012 0.03 16.5 2.1 2 23 246 268 245 268 0.96
5 14 0.00049 0.13 14.5 3.8 3 23 424 444 422 444 0.97
6 14 8.9e-06 0.0023 20.0 3.5 1 23 450 472 450 472 0.98
7 14 4.3e-05 0.011 17.9 2.4 1 23 478 500 478 501 0.96
8 14 4.5e-07 0.00012 24.1 1.1 2 23 514 535 514 535 0.97
9 14 0.00076 0.2 13.9 0.2 2 23 541 562 540 562 0.96
10 14 2.6e-06 0.00069 21.7 1.8 1 23 568 590 568 590 0.96
11 14 4.9e-05 0.013 17.7 3.2 1 21 596 616 596 618 0.94
12 14 7.3e-07 0.00019 23.4 0.8 1 23 624 646 624 646 0.96
13 14 2e-06 0.00052 22.1 3.0 1 23 652 674 652 674 0.99
14 14 2.1e-05 0.0055 18.8 0.1 1 23 679 702 679 702 0.90

Sequence Information

Coding Sequence
ATGGATTTTGATATCGAAAAAATGTGCAGGGTTTGTCTCAAAACCAATTTGGAATCTGTATTGTTGTTTGAAGAACCAAAGAAAATCGGTGGGGTCAGTATCTGCGATATGATTTCTGAACTAACAATTTACAAAGTCCACCGGCATGACGATTTTCCGCATCTTATATGTTATGAATGCATCGAACGAGTTGAAAGTGCTTACTCCTTCAAAAAGGACTTTGAGCAATCTCATCGTAAACTTGTTACATATTTGGATTCAATCAATAAATACCAAGCAATTGAAGACATGAAACCCATACCCACTGAGGAAAAAAGCACCCAAACCATAGATTCTACTTTGTATCCATGCGAGAAGTGCGatcaaaaatttatcaaatatgaGCGATTGCGGGAACACCGAGCCATTGCACACAAAGGGTCGGCCAATCTGTGTCGTATATGTAATAAAACGTTCAACCGCTTGGCAGGATTAAAAAGTCACATTAGTGCGGCACATCCAGAAATTGGCTACCACAACTCTTCGAACCAGTGTTATGTTTGTAATAAAATGTTCACACGCAGAGATCACGTTACTCGCCATATAAGAAATGTCCACAAAATTCAATCTTCTGAAATTAGCTTTGGAATAGAAACGGCATTAATTGAGAAGGATGGCGATCCGTCAAGCCAAATATTGGAAGACGGAGAATGTAATGCAGATGGTGTAATAAAAGGAGAGGCTAAGCCATTTATTGAATGTCTCGTCTgttacaaacatttttcaagcaaaaaccGTCTTAATCGACACATGCTAACCATTCACCAACTAGATTCTACCCATATTCTTAAACAggagcaaaatactgaaatagatacatttgaaaatgatttggaGTTGCTCGCTGAACCTGAAGCATACAGAAACTACACAAATGAAGATGATGAAGAAATatcaaatgattttgataacGAACGCGGTGGTGATGgcgatgatgatgaagatgatgatgaagacGATGACAACGATGATAATGACGGTTTAGATTCAGATAAAGATGGAGCTATCAAGAATACTGAATTTGTGGCGGCAAACAGTTTTATTAAATGTGAGGCAGAAATAACGGAATCACAAACTCCGCAAAATGAAGaaaacaaagttacaataaaacaagaaaaagcaGAATTCAACATCACAGAAAATATCTACACTCCTCCTAAGCTAGAAAAGCGTGAAAAAAGAGAAACAACTTTCGATTGTTTCCACAGAATAGAAGATGGAAAATTCGGATGTAACTTGTGTGAAAAAACCTTTAAGTCTTCTTATCACGTTAAAAGACATTTCTTATCACACACTCAAGAAAAAGCATTCCAATGTACGTTGTGTGAGATGCGATTTAATAGAGCAGATCACCTGAAAAACCACATGACAAAACATAACCCAGTAAAGCCATTCCAATGTGATAGCTGCGGTGCCAGTTATGGTCGTGCAGATCACCTTAAACGTCACAGAGAAATGCATCATTCAAATGATCCGAATAGTCGACAAATCAAAGGGGAGGTTTGTGAATACTGCAATAAGTCATACAGCTCAAAGGCTTATCTTCAAAAGCATATGCTAAAGCACACAGAAAAATGTTGGAAGTGTAAACTTTGTTCCGTTGTATTTGAAACAAGTGAAGCCCTCAAAGAGCATGGAAAATCACACAGCAAGGATAAACCCTTTCTGTGTTCGGAGTGTGGTTTatgttttccaagaaaaaattatcTTATTATTCATATGCGAAGACACAATGGTGAACGACCGTACAAATGTCAGTACTGCGATAAGGGTTTTCCACGTTCTACGGACTTAAAAGCGCATGAAAAGTGTCATACGGGTGAAAAGACACACTTTTGCAATGTATGCGGTAAAGGTTTCCCGCGACCATACAAATTGTCTGTGCACATGCGAATTCATACCGGCGAAAAACCCTATCAGTGTATGCATTGTCCCAAGGCTTTTGCTCAATGTAATGATTTGAAAGCACATATAAGAAGGCATACAGGAGAGCGATTCAGGTGTGAAATATGTGGGGCTggatttatacaaaaatacaatttaacacAACACAAAGCTGATGCCCACGGCATTATCAAGGAGTCTCGTTTAGGTCGAGTGGCCAAAATAACGATTGCAGAGCCAGTTGGAGAGACTATGACCGAAGTTTTAAATGATTCTGGTGAAAAACTGCAAATGGGGCTTACAACAAATCTAATGTTTCGTGGTGTGGCGCTTCATTAA
Protein Sequence
MDFDIEKMCRVCLKTNLESVLLFEEPKKIGGVSICDMISELTIYKVHRHDDFPHLICYECIERVESAYSFKKDFEQSHRKLVTYLDSINKYQAIEDMKPIPTEEKSTQTIDSTLYPCEKCDQKFIKYERLREHRAIAHKGSANLCRICNKTFNRLAGLKSHISAAHPEIGYHNSSNQCYVCNKMFTRRDHVTRHIRNVHKIQSSEISFGIETALIEKDGDPSSQILEDGECNADGVIKGEAKPFIECLVCYKHFSSKNRLNRHMLTIHQLDSTHILKQEQNTEIDTFENDLELLAEPEAYRNYTNEDDEEISNDFDNERGGDGDDDEDDDEDDDNDDNDGLDSDKDGAIKNTEFVAANSFIKCEAEITESQTPQNEENKVTIKQEKAEFNITENIYTPPKLEKREKRETTFDCFHRIEDGKFGCNLCEKTFKSSYHVKRHFLSHTQEKAFQCTLCEMRFNRADHLKNHMTKHNPVKPFQCDSCGASYGRADHLKRHREMHHSNDPNSRQIKGEVCEYCNKSYSSKAYLQKHMLKHTEKCWKCKLCSVVFETSEALKEHGKSHSKDKPFLCSECGLCFPRKNYLIIHMRRHNGERPYKCQYCDKGFPRSTDLKAHEKCHTGEKTHFCNVCGKGFPRPYKLSVHMRIHTGEKPYQCMHCPKAFAQCNDLKAHIRRHTGERFRCEICGAGFIQKYNLTQHKADAHGIIKESRLGRVAKITIAEPVGETMTEVLNDSGEKLQMGLTTNLMFRGVALH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00427485;
90% Identity
iTF_00426547;
80% Identity
-