Cfes039410.1
Basic Information
- Insect
- Chrysotoxum festivum
- Gene Symbol
- lrrfip2
- Assembly
- GCA_963931855.1
- Location
- OZ007556.1:7433763-7438516[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-114 8.6e-110 368.5 32.4 1 299 7 297 7 298 0.93 2 2 0.058 3.7e+03 -1.3 4.3 220 244 326 350 301 372 0.46
Sequence Information
- Coding Sequence
- atggcaCTAACCGTTATGgcTGAAGCAAGGCTGGCAGCCAGACGGCAGGCTCGTGCCGAAGCACGGGAAATTCGTATGCGCGAATTGGAACGTCAGCAAAAAGAGCTGGAACAAAATGCTGATCGAGTATTCGATATGCAAACAGCTGCCGGCATTGATCCTCTGGCTAGATCGCGTCTCAACGCATCTAGCGTCACCGGAGTGGTTAATTCGGTGCGTGCCAGTTCTATGTCCTCCCGCAGAAGTAGTGAAGATTCTCTTGAAGAGGAAGGACGCAGTTTACGTGATATTAGGCATGAACTCAAGGATGTCGAGGAACGTTTTCGAAAAGCAATGATCGCCAATGCACAACTAGACAACGAACGAGCCTCACAATCTTACCAAATTCAATTGCTCAAGGATAAACTGGAAGAAATGGAAGAATCCTTTTCCCAGCTTCAGCgtgaattcaaagaaaaaacacgCGAGTGCAACGCCTTCAAGCGTAACCTTGACAAATTGACAGAAGAACTGAAGCTTGTCCACGGCCAGCTGACTGAACGAGATACGCTTATTGCCGAGCAGGGTTTGGTCATTGTAGCTGTCGAAAACGAGGATGGCTCTGATGCCAAACGTGCTCTAGTCACTTTAGAAAATGCACAATTGTTAGGATCTGTTCAAGGTTCTCTGGACGTTCGACTCAAAAAGTTCAGCgaagaaaaaattcaacttcaggCGGAAGTGCAAAATTTACAGGACCAATTAGAAAATGTCAAAACCCAGGGACGAGGACGGGGTAATTCAATGAATGGTACCCTTGGTTCTGATGAAGATTATGAAGCTCAAAGAGAAGCCAACAAAATCATATCTGACTACAAATATAAATTGCAAAAAGCCGAACAAGAAATCGCTAGTCTACAAGCAAGCTTAGCTAGATCTGAGACACAAGTTATACGATATAAAAGTACAGCGGAAGCAGCTGAAAAAGCCGAAGCAGAGTTGAAAATCGAAAGGAGAAAACTCCAACGAGAGaaccgTGAAGCAATGGAACGACTAGAAGAACTAGAAACATCTAATAATCACCTTCTAAAGCGATTGGATAAATTAAAGAACGCCAAGAGTGCACTTCTCAAAGAACTCTGA
- Protein Sequence
- MALTVMAEARLAARRQARAEAREIRMRELERQQKELEQNADRVFDMQTAAGIDPLARSRLNASSVTGVVNSVRASSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNERASQSYQIQLLKDKLEEMEESFSQLQREFKEKTRECNAFKRNLDKLTEELKLVHGQLTERDTLIAEQGLVIVAVENEDGSDAKRALVTLENAQLLGSVQGSLDVRLKKFSEEKIQLQAEVQNLQDQLENVKTQGRGRGNSMNGTLGSDEDYEAQREANKIISDYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMERLEELETSNNHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- iTF_01521087;
- 80% Identity
- -