Chae014838.1
Basic Information
- Insect
- Chrysolina haemoptera
- Gene Symbol
- nfxl1
- Assembly
- GCA_958298965.1
- Location
- OY282587.1:5021619-5028982[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 6.2e+04 -7.8 5.6 15 19 169 173 168 173 0.81 2 18 0.13 4.1e+03 -0.3 0.4 4 10 204 210 203 210 0.95 3 18 1.2e-08 0.00038 22.1 16.7 1 19 218 235 218 235 0.99 4 18 5.1e-07 0.016 17.0 17.9 1 19 271 289 265 289 0.87 5 18 4.8e-10 1.5e-05 26.6 11.0 1 19 324 342 324 342 0.99 6 18 0.85 2.6e+04 -2.9 0.9 6 10 367 371 366 371 0.86 7 18 7.9e-06 0.25 13.2 13.0 1 18 377 394 377 395 0.97 8 18 1.3 4.2e+04 -3.6 3.4 1 10 404 413 404 415 0.73 9 18 5.6e-05 1.7 10.4 17.1 1 18 429 446 429 447 0.94 10 18 1.6e-08 0.0005 21.7 12.6 1 19 456 474 450 474 0.85 11 18 0.63 2e+04 -2.5 1.2 5 10 502 507 502 507 0.92 12 18 7.8e-05 2.4 10.0 5.7 9 19 522 532 520 532 0.90 13 18 1.4 4.3e+04 -3.6 9.4 4 12 544 552 542 552 0.87 14 18 2 6.2e+04 -6.9 4.5 14 18 580 584 580 584 0.86 15 18 2 6.2e+04 -4.4 1.4 6 10 611 615 610 615 0.58 16 18 8.1e-06 0.25 13.1 3.8 1 11 621 631 621 635 0.96 17 18 2.3e-06 0.071 14.9 20.3 3 19 662 678 661 678 0.94 18 18 1.3e-06 0.039 15.7 11.7 1 16 721 735 721 741 0.87
Sequence Information
- Coding Sequence
- ATGCATAGCCAACCTAAACCTCGCAATCCATGGACAAAAAACGTTCAACAGAAGAAAAACGAGCAGAgccctaaaaataaaaaaaaccctAGCGTGAAGCCTGCTTTAACTACATCCGAGCTAAAATTCAAAGAAGCCCAATCCAAGCAACAAGCTGCAGTCAAAAAACATGTAAAAGAATACGAGTCTTCCTCGGAAGAAGAGGAATTAGACTCCAGCAATTTGATTGatgCCATTCTCAAGAATTACAGGAATACTGGTGGTGAGAATGAACATGCTGGACGGACACAAACGTTTATCGAAGAAACTTTACTGTCTGGCGCTGCAACTTGTCTCATTTGTATATCTAAAGTCAAACGAGACGATGAGATCTGGAGTTGCAGCAATTGTTACGGGTCCTTTCATCTTATGTGCATTCAAAGGTGGTCTAAAGATACCATAACGCAGCAAAAACATGCTTTGCAAGAACAAATTGTTGTCCGGCAGACAAAACTCTTTTGGTGCTGCCCAAAATGCAGATTTGAATATACCTCTGAAGATGTTCCTACTAAATATATGTGTTTTTGCAAGAAAAGTGAAAGTCCTAAGTACCATCCATTCCTGGTACCTCATTCCTGTGgagaaatttgcaaaaaaaatttgataccGAGCTGTGGACACAAGTGTATGCTATTGTGTCATCCAGgtccATGTCCTCCATGTCCCGTTACTGTGAATGTATCGTGTTATTGTGGGTCAGAACCTCCAAGAACTCAGAGGTGTAGCAACAAGGAATGGTCTTGCAACGGAAAATGCGGAAGATCTTTGGAGTGCCAGAAACACACTTGCACCAACCCATGCCATCCAGGTGAATGTGGTCCGTGTCCTAAGAAAAGCATCCAAAAGTGTGTGTGCAAATCTCAGCAGAAGCTCCGTGATTGTGCCAAGCCTGTTTGGCATTGTGACAAGATTTGTAACAGAGCTTTAGAGTGTGGAAACCACAGATGTCAGGAAGTATGTCATGATGGTGTATGTGACATGTGTCCCCTAAGCAAACCGAGAACATGTCCTTGTGGAAAAACTCCCTACCAGCTGCCCTGCACTGAAGATGCACCTAGCTGTCAAGACACCTGTGACAAAATTCTTGATTGTGGAGTCCATACTTGTAATCAAAGGTGTCACAAGGAAAAATGTGGACAGTGCCTTGAAACTGTTGAGAAGTCTTGTAGATGTGGGTTGCATACCAAAGAAGTTCAGTGCTGCAAGCCTTACTTCTGCGAGGTGAAATGCAAACAGATGAAGGATTGCAATAAACATCCCTGTAACAGAAAATGTTGTGACGGCAACTGCCCCCCTTGTGAGAAGCCCTGTGGAAGGACTCTCAGCTGCAGAAATCACAAATGCGCTTCCGTATGTCATAGAGGGCCATGTTACCCTTGCAGTCAAACAGAAATTGTGTCTTGTAGATGCGGGGCGACAAGACTAGAGGTGCCTTGTGGACGCAAAAATAAAACCAGACCACCAAAATGCAACAAGCCGTGTTTGTTACCTCCGGATTGTCATCACGAGAAAAGAGACAACCACAAATGCCATTTCGGCGACTGTCCTCCATGCAGGCAAAGGTGCAACAAAAGCAGGTCAAAGTGCTGCCATCTATGTCCGGCGCCTTGTCATTCTGCCGTTCTCGTGAAGGTTGAGGGGCAAAAAGCTACTACTCCTTGGGAGCAGACTAAGCCTCTAATCGAGAAGAGGGACTTACCATGTCCGGATTGTGTTGTTCCTATGTCTGTCACATGTTTAGGGAAGCATGAGACATCTGACTGGCCTTGTTATTTGGCAAAGCCTTCCAGTTGTCACCGTCCGTGTGGGAGAGATTTGTCTTGTGGGAACCACAGCTGTTCCTTGCCGTGTCATTTGGTCGAAGGAGCTACAGACGAAATTATGTCGGGGAAAAACTGTGAGAGATGTGAAGGCAGCTGTACCAAGGACAGACCAGAAGGCTGTCAGCACTCATGTCCGAAACCATGCCACCCAGGACCCTGTCCACCCTGTAAAAGTATGGTGAGGATCAAGTGTTATTGCGGTCTTAATCAACCCTACGTCACGTGCAGTGACTGGCTTGACGAAGACAAGAAGTTGGAGTTGCAGAGCTGTGGAAATCAGTGCCCAAAGAATtatgaatgTGGACATAGATGCAAAGCCAACTGCCACGCAGGTCCCTGTCCAAACTCTGAAGCATGCAAGAAAAAGGTTAAAGTCACCTGCAAGTGCAAACGACTCAAGAAGGAGTTCTCCTGTGAAACTGTTCGCAAGAAAATGGCCTCTTTTGACTGCGATGATGTATGTTCGTCCAAAAAAGAGGAAGAAAGGAAAATCAGGGAAGCCGCTGACGAACAGAGGAAGCGAGAGGAGGAAATCAAACAAAAGAAGGAGATGGAGCAGTATCAAAAGATTTTCGAAGGGAAAAAGAAGAACAGGGAGAGGAGGGTTTTTGATGAGAAGAAGGAGGTTGGGGTTTTTAAGAAATATTGGTTTGTGATTTTGTCAGTTGTGTTGCTTTTTTTAGCATTAGCAGTGTATTACTGCttgtaa
- Protein Sequence
- MHSQPKPRNPWTKNVQQKKNEQSPKNKKNPSVKPALTTSELKFKEAQSKQQAAVKKHVKEYESSSEEEELDSSNLIDAILKNYRNTGGENEHAGRTQTFIEETLLSGAATCLICISKVKRDDEIWSCSNCYGSFHLMCIQRWSKDTITQQKHALQEQIVVRQTKLFWCCPKCRFEYTSEDVPTKYMCFCKKSESPKYHPFLVPHSCGEICKKNLIPSCGHKCMLLCHPGPCPPCPVTVNVSCYCGSEPPRTQRCSNKEWSCNGKCGRSLECQKHTCTNPCHPGECGPCPKKSIQKCVCKSQQKLRDCAKPVWHCDKICNRALECGNHRCQEVCHDGVCDMCPLSKPRTCPCGKTPYQLPCTEDAPSCQDTCDKILDCGVHTCNQRCHKEKCGQCLETVEKSCRCGLHTKEVQCCKPYFCEVKCKQMKDCNKHPCNRKCCDGNCPPCEKPCGRTLSCRNHKCASVCHRGPCYPCSQTEIVSCRCGATRLEVPCGRKNKTRPPKCNKPCLLPPDCHHEKRDNHKCHFGDCPPCRQRCNKSRSKCCHLCPAPCHSAVLVKVEGQKATTPWEQTKPLIEKRDLPCPDCVVPMSVTCLGKHETSDWPCYLAKPSSCHRPCGRDLSCGNHSCSLPCHLVEGATDEIMSGKNCERCEGSCTKDRPEGCQHSCPKPCHPGPCPPCKSMVRIKCYCGLNQPYVTCSDWLDEDKKLELQSCGNQCPKNYECGHRCKANCHAGPCPNSEACKKKVKVTCKCKRLKKEFSCETVRKKMASFDCDDVCSSKKEEERKIREAADEQRKREEEIKQKKEMEQYQKIFEGKKKNRERRVFDEKKEVGVFKKYWFVILSVVLLFLALAVYYCL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00328840; iTF_00756314;
- 90% Identity
- iTF_00328840;
- 80% Identity
- -