Basic Information

Insect: Chrysolina americana
Gene Symbol: nfxl1
Assembly: GCA_958502065.1
Location: OY293412.1:100410705-100419143[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2 7.3e+04 -7.8 5.6 15 19 169 173 168 173 0.81

2 18 0.13 4.8e+03 -0.3 0.4 4 10 204 210 203 210 0.95

3 18 1.2e-08 0.00045 22.1 16.7 1 19 218 235 218 235 0.99

4 18 8.2e-07 0.03 16.3 17.1 1 19 271 289 265 289 0.87

5 18 2 7.3e+04 -4.3 0.9 6 10 314 318 314 318 0.93

6 18 4.9e-10 1.8e-05 26.6 11.0 1 19 324 342 324 342 0.99

7 18 0.85 3.1e+04 -2.9 0.9 6 10 367 371 366 371 0.86

8 18 1.3e-05 0.46 12.5 11.2 1 18 377 394 377 395 0.97

9 18 0.36 1.3e+04 -1.7 0.6 1 5 404 408 404 413 0.89

10 18 5.6e-05 2 10.4 17.1 1 18 429 446 429 447 0.94

11 18 1.6e-08 0.00059 21.7 12.6 1 19 456 474 450 474 0.85

12 18 0.6 2.2e+04 -2.4 1.0 5 10 502 507 502 507 0.94

13 18 7.9e-05 2.9 10.0 5.7 9 19 522 532 520 532 0.90

14 18 1.4 5.1e+04 -3.6 9.4 4 12 544 552 542 552 0.87

15 18 2 7.3e+04 -4.4 1.4 6 10 611 615 610 615 0.58

16 18 8.1e-06 0.29 13.1 3.8 1 11 621 631 621 635 0.96

17 18 8.5e-06 0.31 13.1 19.6 3 19 662 678 661 678 0.94

18 18 2.3e-06 0.084 14.9 11.7 1 16 721 735 721 741 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2	7.3e+04	-7.8	5.6	15	19	169	173	168	173	0.81
2	18	0.13	4.8e+03	-0.3	0.4	4	10	204	210	203	210	0.95
3	18	1.2e-08	0.00045	22.1	16.7	1	19	218	235	218	235	0.99
4	18	8.2e-07	0.03	16.3	17.1	1	19	271	289	265	289	0.87
5	18	2	7.3e+04	-4.3	0.9	6	10	314	318	314	318	0.93
6	18	4.9e-10	1.8e-05	26.6	11.0	1	19	324	342	324	342	0.99
7	18	0.85	3.1e+04	-2.9	0.9	6	10	367	371	366	371	0.86
8	18	1.3e-05	0.46	12.5	11.2	1	18	377	394	377	395	0.97
9	18	0.36	1.3e+04	-1.7	0.6	1	5	404	408	404	413	0.89
10	18	5.6e-05	2	10.4	17.1	1	18	429	446	429	447	0.94
11	18	1.6e-08	0.00059	21.7	12.6	1	19	456	474	450	474	0.85
12	18	0.6	2.2e+04	-2.4	1.0	5	10	502	507	502	507	0.94
13	18	7.9e-05	2.9	10.0	5.7	9	19	522	532	520	532	0.90
14	18	1.4	5.1e+04	-3.6	9.4	4	12	544	552	542	552	0.87
15	18	2	7.3e+04	-4.4	1.4	6	10	611	615	610	615	0.58
16	18	8.1e-06	0.29	13.1	3.8	1	11	621	631	621	635	0.96
17	18	8.5e-06	0.31	13.1	19.6	3	19	662	678	661	678	0.94
18	18	2.3e-06	0.084	14.9	11.7	1	16	721	735	721	741	0.87

Sequence Information

Coding Sequence: atgcATAGCCAACCTAAACCTCGCAACCCATGGACTAAAAACGTACAACAGAAGAAAAACGACCAGAGCTCTAAAAATAAAAACCCCCCTAACGTCAAACCTGCATTGACTCCATCCGAGCTAAAATTCAAAGAAGCCCAATCCCAGTTGCAAGCTGCAGTTAAAAAACATGTGAAGGAATACGAGTCTTCCTCGGAGGAAGAGGAATTAGACTCCAGCAATTTGATTGATGCCATTCTCAAGAATTACAGGAATACTGGTGGTGAGAATGAACATGTTGGGAGGACACAAACgtttattgaagaaactttaCTCTCTGGTGCTGCAACTTGTCTCATTTGCATATCTAAAGTCAAAAGGGACGATGAGATCTGGAGCTGCAGTAATTGTTACGGGTTCTTCCATCTCATGTGCATTCAAAGGTGGTCCAAAGACACCATAACACAGCAGAAACATGCTCTGCAAGAACAAATAGTAGTCCGGCAGACAAAGCTGTTTTGGTGCTGCCCAAAGTGCCGTTTTGAGTATACCTCTGAAGATGTTCCTACAAAATATATgtgtttttgcaaaaaaatcgaAAGTCCAAAGTACCATCCATTCCTGGTACCGCATTCTTGTGGGGAAATTTGCAAAAAGAATTTGATGCCGAGCTGCGGACACAAGTGTATGCTTTTGTGTCATCCAGGTCCATGTCCTCCATGTCCTGTTACCGTAAATGTATCCTGTTACTGTGGATCAGAACCACCGAGAACCCAGAGGTGTAGCAGCAAAGAATGGTCTTGCAATGGCAAATGTGGAAGGTCTCTGGAGTGCCAGAAACACACTTGTACCAACCCATGCCATCCAGGTGAATGCAGTCCATGTCCTAAGAAGAGCATCCAAAAGTGTGTGTGCAAATCTCAGCAGAAGCTGCGTGATTGTGCTAAGCCTTTCTGGCATTGTGATAAGGTCTGCAACAAAGCATTAGAGTGTGGGAACCACAGATGTCAGGAAGTCTGCCATGATGGAGTATGCGACATGTGCCCCCTAAGCAAACCGCGGACTTGTCCTTGTGGAAAAACCGCCTACCAGCTGCCTTGCACTGAAGATACACCTAGCTGTCAAGACACTTGTGAAAAAATTCTTGATTGTGGGGTCCATACTTGCAATAAAAGATGTCACAAGGAAACGTGCAGACAGTGCCTTGAAACTGTTGAGAAGTCTTGTAGATGTGGATTGCATACTAAAGAAGTGCAGTGCTTCAAGCCTTACTTTTGCGAGGTGAAATGTAAACAGATGAAGGACTGCAATAAACATCCCTGTAACAGGAAATGTTGTGATGGCAACTGCCCCCCTTGCGAGAAGCCCTGCGGGAGGACTCTCAGCTGCAGAAATCACAAATGCGCTTCGGTGTGTCACAGAGGGCCATGTTACCCTTGCAGTCAAACAGAGATTGTGTCTTGTAGATGCGGAGCGACAAAACTAGTGGTGCCTTGCGGACGCAAAAATAAAACTAGACCACCGAAATGCAACAAGCTCTGCTCGTTACCTCCCGATTGCCATCACGATAAAAGGGACAACCACAAATGCCATTTTGGCGACTGTCCTCCATGCAGGCAGAGATGTAACAAAGGCAGGACAACGTGCTGCCATCTATGTCCGGCACCGTGTCATTCTTCGGTTCTCGTGAAGGTCGAAGGGCAAAAGGCTACTACTCCTTGGGAGCAGACTAAGGCTCAGATCGAGAAGAGGGAATTGCCGTGCTCGGATTGTGACGTTCCTATGTCTGTCACGTGTTTGGGACAACACGAGACATCTGATTGGCCTTGTCATTTGGCAAAGCCTTCCAGTTGCCACCGTCCGTGTGGGAGAGATTTGGATTGTGGGAATCACAGCTGTTCCTTGCCGTGTCATTTGGTCGAAGGAGCTGCTGACGAAATGAAGTCGGGAAGTAACTGTGAGAGATGTGAAGGCAGCTGTACCAAAGAAAGACCGGAAGGCTGTCAGCATGTATGCCCGAAACCGTGCCACCCTGGTCCCTGTCCGCCCTGTAAGAATATGGTGAGGATCCGGTGCTATTGCGGTCTCAATCAACCCTACGTCACATGCAGTGATTGGCTTGATGGAGACAAGAAGTTGGAGTTGCAGAGCTGTGGAAATCAGTGCCCGAAGAACtaTGAATGTGGGCACAGATGCAAGGCCGACTGCCATGCAGGACCCTGTCCAAACTCTGAGGCGTGCAAGAAAAAGGTAAAAGTCCCCTGCAAGTGCAAACGACTCAAGAAGGAGTTCTCTTGCGAAACTGTTCGCAAGAAAATGGCCTTCGTCGACTGCGATAACGTATGTTTGTCCAAAAAGGAAGAAGAACGAAAAATCAGAGAAGccgccgacgaacagaggaaacgAGAGGAGGAGATCAAACAAAAGAAGGAGTTGGAGCAGTACCAGAAGATTTTCGAAGGAAAAAAGAAGAACAGGGAGAGGAGGGTTTTCGACGAAAAGGAGGAGGTTGGGGTTCTTAAGAAATATTGGTTTGTGATTTTGTCGGTTGTGTTGCTTTTGTTAGCTTTAGCAGCGTATTACTTTGTAATAAATTAA
Protein Sequence: MHSQPKPRNPWTKNVQQKKNDQSSKNKNPPNVKPALTPSELKFKEAQSQLQAAVKKHVKEYESSSEEEELDSSNLIDAILKNYRNTGGENEHVGRTQTFIEETLLSGAATCLICISKVKRDDEIWSCSNCYGFFHLMCIQRWSKDTITQQKHALQEQIVVRQTKLFWCCPKCRFEYTSEDVPTKYMCFCKKIESPKYHPFLVPHSCGEICKKNLMPSCGHKCMLLCHPGPCPPCPVTVNVSCYCGSEPPRTQRCSSKEWSCNGKCGRSLECQKHTCTNPCHPGECSPCPKKSIQKCVCKSQQKLRDCAKPFWHCDKVCNKALECGNHRCQEVCHDGVCDMCPLSKPRTCPCGKTAYQLPCTEDTPSCQDTCEKILDCGVHTCNKRCHKETCRQCLETVEKSCRCGLHTKEVQCFKPYFCEVKCKQMKDCNKHPCNRKCCDGNCPPCEKPCGRTLSCRNHKCASVCHRGPCYPCSQTEIVSCRCGATKLVVPCGRKNKTRPPKCNKLCSLPPDCHHDKRDNHKCHFGDCPPCRQRCNKGRTTCCHLCPAPCHSSVLVKVEGQKATTPWEQTKAQIEKRELPCSDCDVPMSVTCLGQHETSDWPCHLAKPSSCHRPCGRDLDCGNHSCSLPCHLVEGAADEMKSGSNCERCEGSCTKERPEGCQHVCPKPCHPGPCPPCKNMVRIRCYCGLNQPYVTCSDWLDGDKKLELQSCGNQCPKNYECGHRCKADCHAGPCPNSEACKKKVKVPCKCKRLKKEFSCETVRKKMAFVDCDNVCLSKKEEERKIREAADEQRKREEEIKQKKELEQYQKIFEGKKKNRERRVFDEKEEVGVLKKYWFVILSVVLLLLALAAYYFVIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00330237;
90% Identity: iTF_00330237;
80% Identity: -