Gqui019842.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Gonioctena quinquepunctata
Gene Symbol
nfxl1
Assembly
GCA_018342105.1
Location
JAFIRS010000163.1:951011-1041426[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 2 3.8e+04 -7.8 5.6 15 19 168 172 167 172 0.81
2 18 0.13 2.5e+03 -0.3 0.4 4 10 203 209 202 209 0.95
3 18 1.2e-08 0.00023 22.1 16.7 1 19 217 234 217 234 0.99
4 18 3.2e-06 0.06 14.4 15.1 1 19 270 288 264 288 0.86
5 18 1.6e-09 3.2e-05 24.9 10.8 1 19 323 341 323 341 0.99
6 18 0.85 1.6e+04 -2.9 0.9 6 10 366 370 365 370 0.86
7 18 3.8e-06 0.073 14.2 12.4 1 18 376 393 376 394 0.97
8 18 1 1.9e+04 -3.2 0.4 1 5 403 407 403 407 0.88
9 18 5.6e-05 1.1 10.4 17.1 1 18 428 445 428 446 0.94
10 18 7.2e-10 1.4e-05 26.1 11.0 1 18 455 472 455 473 0.97
11 18 0.7 1.3e+04 -2.7 1.1 5 10 501 506 501 506 0.94
12 18 7.8e-05 1.5 10.0 5.7 9 19 521 531 519 531 0.90
13 18 0.023 4.4e+02 2.1 6.0 4 12 543 551 541 551 0.90
14 18 2 3.8e+04 -5.9 4.4 14 18 579 583 579 583 0.91
15 18 0.35 6.6e+03 -1.7 1.2 6 10 610 614 609 614 0.85
16 18 7.8e-05 1.5 10.0 4.1 1 11 620 630 620 634 0.96
17 18 1.4e-05 0.28 12.3 19.7 3 19 661 677 660 677 0.94
18 18 1.2e-05 0.23 12.6 12.2 1 16 720 734 720 740 0.87

Sequence Information

Coding Sequence
ATGCACACCCAACCTAAACCTCGCAATCCATGGGTGAAAAATAATCCTCTACCGAAGAAAAACGACAAAAGCTCCAAAAATTCAAACCACACCAAACCCTCCTTGACTTCATctgaacaaaaattcaaagaagcACAGACAAAGTTACAAGCTGCTGTTAAAAAACATGTGAAGGAGTATGAATCTTCCTCAGATGAAGAGGAGTTAGAGTCGAGTAGTCtcattgatGCTATTCTGAAGAATTACAGAAATACTGGTGGCGAAACCGAACATGTAGGACGAACACAAACTTTCATCGAAGAAACACTGCTCTCTGGTACAGCAACATGCCTCATTTGTATTTCAAAAGTCAGGCGGGATGATGAGATTTGGAGCTGTGCGAGCTGCTATGGATTCTTTCACCTCATGTGTATACAGAGGTGGTCGAAAGATACCATAACCCAACAAAAACATGCATTGGAAGGACAAATCGTTGTACAGCAAACGAAGCTTTGTTGGTGTTGTCCAAAATGCCGTTTTGAATATACCTCCGAAGATGTTCCTACTAAGTATTTGTGTTTTTGCAAGAAAACCGAGAACCCAAAGTATCACCCATTTTTAGTACCCCATTCTTGTGGAGAGATTTGTAAGAAGAATTTGATACCCAGTTGTGGGCATAAGTGTATGCTTCTATGTCATCCAGGACCATGTCCTCCATGCCCAGTTACTGTGAATGTATCATGCTATTGTGATTCGCAACCTCCCAGAACACAAAGATGTAGCAACAAAGAATGGTCATGCAATGGCTTATGTGGAAAGTTATTAGAATGTGAAAAACACTCTTGTGCAAACTCCTGCCATCCCGGGGAATGTAAACCTTGCCCCAAGAAGAGTATTCAGAAGTGTGTGTGCAAATCTCAGCAGAAACTGCGAGATTGTGCAACACCATTTTGGCATTGTGAAAAGGCCTGTAATAAACCCCTAGAATGTGGCAACCACAACTGTCAAGAGATATGCCATGACGGTGTCTGTGACATGTGCCCTCTAGCCAAAACCAGGACTTGTTCTTGTGGGAAAACTTCCTATCAGCTCCCTTGCACCGAAGATACACCTAGCTGTCAAGACACCTGTGAAAAAATACTCGATTGTGGAGTTCATACTTGCAATCAAAGATGTCACAAGGATAAATGTGGACAGtGTCTGGAAACTGTTGAGAAATCTTGTAGATGTGGTTTACATAACAAAGAAGTGCAGTGCTTTAAGCCCTATTTGTGTGATGTCAAATGCAAACAAATTAAAGACTGCAATAAACATCCATGCAATAGGAAGtGCTGCGATGGAAACTGCCCCCCATGTGAGAAACCTTGCAGTCGTACGCTCAGCTGCAGCAACCACAAATGTGCTTCGGTATGTCACAGGGGGCCTTGTTATCCTTGTAACCAAACAGAAGTTGTTACCTGTAGATGTGGAGAGACCAAATTGGTGGTACCATGTGGACGTAAAAACAAAACCAGGCCACCCAAATGTAGCAAATTGTGTCTGTTGCCTCCTGATTGTCACCACCAAAAGAGAGACAACCATAAGTGCCACTTTGGAGACTGTCCGCCGTGCAGGCAAACGTGTAACAAGAATAAAGCAGGTTGCCCTCATCAGTGTCCTGCGCCTTGTCATTCGGCCGTCTTGGTCAAAATCGAAGGACAAAAAGCATCCATGCCTTGGGAACAAACCAAACCtcaaattgaaaagaaagatttacCATGTCCAAATTGCATCGTTCCTTTGCCAGTTACTTGTCTTGGCCAGCATGAAACATCAGAGTGGCCCTGTTACTTGGCAATACCTTCAAGTTGTCAGAGACCATGTGGTAGGATATTGGAATGTGGAAATCACATCTGTTCTACACTTTGTCATTTGGTAGAAGGATCACCAGATGAAATAAAGTGTGGTACAAATTGCGAAAGATGTGAAGGTAGCTGTACCAAAGAACGTCCAGAAGGCTGTCAACACTCTTGTCCTAAACAATGTCACCCCGGCCCTTGTCCACCATGCAAGAGCATGTTGCGAATCAGGTGCTATTGCGGCCTCAATCAACCGTATGTCACATGCAATGATTGGCTGGACGAGGAGAAGAAAGCAGAACTGCAGAGTTGTGGGAATCAGTGTCCCAAGAATtATGATTGCGGACACAGGTGCAAGACCAACTGCCACCCAGGATCCTGTCCGAATGCCGAGGCCTGCAAGAAAAAAGTCAAAGTGCCCTGCAAATGCAAGAGAATCAAAAAAGAATTCTCTTGTGAGAGTGTACGTAAGAAAATGGCCTTTGTCGAGTGTGACGATATATGTCTGaccaaaaaagaagaagaaaggaAGATCAGAGAAACGGCTGAGGAACAGAAAAAGAGAGAGGAGGAGATAAAACAAAAGAAAGAATTGGAAAAGTACCAGAAGATTTTTGAAGGGAAGAAGAAAAATAGGGAGAAGAGGGTGCATGATGATAAAGAGGAGGTTGAAATATTTAGGAAATATCGGGTTTTGATAGTATCGTTTGTGTTTCTCACGGTGTCTATgggattgtattttattttcaataaataa
Protein Sequence
MHTQPKPRNPWVKNNPLPKKNDKSSKNSNHTKPSLTSSEQKFKEAQTKLQAAVKKHVKEYESSSDEEELESSSLIDAILKNYRNTGGETEHVGRTQTFIEETLLSGTATCLICISKVRRDDEIWSCASCYGFFHLMCIQRWSKDTITQQKHALEGQIVVQQTKLCWCCPKCRFEYTSEDVPTKYLCFCKKTENPKYHPFLVPHSCGEICKKNLIPSCGHKCMLLCHPGPCPPCPVTVNVSCYCDSQPPRTQRCSNKEWSCNGLCGKLLECEKHSCANSCHPGECKPCPKKSIQKCVCKSQQKLRDCATPFWHCEKACNKPLECGNHNCQEICHDGVCDMCPLAKTRTCSCGKTSYQLPCTEDTPSCQDTCEKILDCGVHTCNQRCHKDKCGQCLETVEKSCRCGLHNKEVQCFKPYLCDVKCKQIKDCNKHPCNRKCCDGNCPPCEKPCSRTLSCSNHKCASVCHRGPCYPCNQTEVVTCRCGETKLVVPCGRKNKTRPPKCSKLCLLPPDCHHQKRDNHKCHFGDCPPCRQTCNKNKAGCPHQCPAPCHSAVLVKIEGQKASMPWEQTKPQIEKKDLPCPNCIVPLPVTCLGQHETSEWPCYLAIPSSCQRPCGRILECGNHICSTLCHLVEGSPDEIKCGTNCERCEGSCTKERPEGCQHSCPKQCHPGPCPPCKSMLRIRCYCGLNQPYVTCNDWLDEEKKAELQSCGNQCPKNYDCGHRCKTNCHPGSCPNAEACKKKVKVPCKCKRIKKEFSCESVRKKMAFVECDDICLTKKEEERKIRETAEEQKKREEEIKQKKELEKYQKIFEGKKKNREKRVHDDKEEVEIFRKYRVLIVSFVFLTVSMGLYFIFNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00330237;
90% Identity
-
80% Identity
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