Ctib024843.1
Basic Information
- Insect
- Chorisops tibialis
- Gene Symbol
- ZFX
- Assembly
- GCA_963669355.1
- Location
- OY770263.1:158079855-158094314[+]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.0026 16 7.1 0.2 21 49 476 504 471 508 0.92 2 8 2.4 1.5e+04 -2.4 0.0 22 45 539 562 537 566 0.81 3 8 0.071 4.4e+02 2.5 0.1 21 48 600 627 594 631 0.90 4 8 0.0016 10 7.8 0.4 20 49 661 690 654 694 0.87 5 8 0.69 4.2e+03 -0.6 0.0 26 48 701 723 697 727 0.83 6 8 0.065 4e+02 2.6 0.2 21 49 724 752 720 756 0.91 7 8 0.00059 3.6 9.2 0.0 26 48 763 785 757 789 0.91 8 8 2.2e-05 0.14 13.7 0.1 21 49 821 849 819 852 0.93
Sequence Information
- Coding Sequence
- ATGTTCCCACTTTTCGATGCAAATGTGAAACTGGTGGACGAGAAATTTCGTAGTGCTGTTGAAATGTTGGAAACCTTCACTTCTGTCCCGATTAACAATAAAGACTACTTACCTGATCACATTTGTGGCACCTGCCTTAACGAAATTCATCGTGCATATTCATTCAAGAGGAAATGTGAAAAATCAGAAATGCTTCTGAATCAACTGAAAAAAGTTGATATTACCTTTGAAAAACTAATAGATCTTTCAAACCGGATTGGAATTGATAGCGAACTTATAGGCACCTGTGAAATTCAAAGTATTGTAAAAGAAGAACTAGAGGAAACACAATTTGCGGAAGTTGAATGTGTACCAGACGTAcaaatgaattttaaaattgagcCCAAATTGGAAATTAAAGATAGCGATTGCGACGACAACGAATACAAGACTGAAGAGCAATTGAAATGTTCGGCTTGTGAAAACCAATTTGAATCACTTGATTTATTCTCCAGACATATACTTACTGATCATATAGAAGAAAATTTGTGCAAACTTTGCAATGAAGaaatttatgGCAGCTTATTTGATCATTCGGTCAAACATCTTTCGACAAGCAATTTGGCTGAAATAAAAGCGGAATATTGTCAACATTGCTTTAAGCTCTTTGCagatatgaaaatgttaaagctaCATGTATGTCCGTCAAATGCATCTAATAGATCCTATACCAATAATGAAATGAAACAAAACACCCATCAAAGCAATGTGAACATTAAAGAGACAGGAGATCTTATTGATATTACCTTAGAAAAACGAATAGATCTCTTTAATCGGAATGGGATTGATAGCGAATTTATAGGCACTTGTAAAATTCAAAGCAGTGTAAATGCAGAACTACAGAAAACCAAATTTGCGGAAGTTGAATGTGTACCAGACGTACAAATGAATTTTAAAACTGAGCCTGAGTTGGAAATTGAAGATTTCGATTGCGACGACTATGAATTCAAAACTGAAGAGCAATTGAAATGTTCGGCTTGTGAAAACCAATTTGAATCACGTGATTTATTCTGCCGACATATAATTACTGATCATATAGAAGGAAATCTATGCAAACTTTGCAATGAAGTAATTGACGATAGCCTATTTGATCATTCGGTCAAACATCTTCCGGCAAGCGATTTGGATAGATTAAGAACTGAATATTGTCAACATTGCTTTAAACCCTTTGCAGATTTGAAATTGTTAAGGCAACATGCGTGTCCATCAAATGCACCGAATAGATCCGATTACAATAATGAAATGGAACAAAACAACTATCAAAGCAACGTAGACATTAAAGAGACTGAAGATCTTATTGATTCAAATATGAAACATCAATGTAGCGTTTGCTCGAAAATTTATGGTCGTAAGAATAGTCTAACTATTCACATGCGTATCCATACAGGTGAAACTCCGTTTCAATGCGAATTTTGCTCGGAAAAATTTCGACTTAGACATTCTCTCCGCGTTCATATGGAAATTAAACACATAAATGAATTACCTGACGGTAAGCCAAAGTTTCAGTGCACCGTCTGTTTGAAAATCTTTGCTTGTAAAAACCATCTAGTCGGTCATATGCTTACCCATACAGGCGAGAAACCATTACAATGTAAATTCTGTTCGGACAAATTTCGACACAAACCATCGCTAGTTACGCATATGAAAACGTTACatccaaaagaatttgagaccgATAAGTCGGAATATCAATGCAGTATTTGTTCGCAAGGTTTCAGCTATAACAACGACTTAGTAACTCATATGCGTATCCATAGCGACGAGAAGCCGTTTCCGTGTGAATTTTGTTCTAAAAAGTTCAGATTCAGGCATATGGTACGAGTTCACATGGAAAAGAAGCACACGAATGAATTGCCTGATGGTAAACCGACATATCAATGTAACGTTTGTTCGAAAGTGTTTGGTTACAATAGCGATTTAATAAGGCATATGCGTAGTCATACAGATGAGAAACCGTTTCAGTGTAAACTATGCTTGAATAATTTCCGGTACAGACATTTGCTAAGAGTTCATATGGAAAAGAAACACATAGATGAATTGCCCATTGATAAACCAAAATTTCAGTGTAACATTTGttcgaaaatttttggataCAACAACAGTTTAATCAGACACATGCGTATGCATACTGGCGAGAAACCATTTCAATGTAAATTGTGTCCagaaaaatttcaacataaGCATGTGATGCGGGTCCATATGGAAACGAAACACATAAATGAATTGCCCGATTGTAAACCGAAAAATCAATgtactttttgttttaaaattttcgattacGGCAGATCGCTGAGAACCCATTTGGAAACAAAACATTCGAATGAATTGCCTGCCGATAAACCACCAAAGTTTCAGTGTCACTTGTGCTCGAAAGCATTTGCTGGAAATAACCATCTGCTCAGACATATACTTGTACACACTGGCGAGAAGCCATTCAAATGTCAAATATGTACAAACGCATATCGAAGTAATAAGGAATTAAATCGGCATCTACGAATGAAGCACACCACTGATAATATGATCGGCAAAGACAGTCAAAGCCTAGCTGACACTCAGCAATTATTTTGA
- Protein Sequence
- MFPLFDANVKLVDEKFRSAVEMLETFTSVPINNKDYLPDHICGTCLNEIHRAYSFKRKCEKSEMLLNQLKKVDITFEKLIDLSNRIGIDSELIGTCEIQSIVKEELEETQFAEVECVPDVQMNFKIEPKLEIKDSDCDDNEYKTEEQLKCSACENQFESLDLFSRHILTDHIEENLCKLCNEEIYGSLFDHSVKHLSTSNLAEIKAEYCQHCFKLFADMKMLKLHVCPSNASNRSYTNNEMKQNTHQSNVNIKETGDLIDITLEKRIDLFNRNGIDSEFIGTCKIQSSVNAELQKTKFAEVECVPDVQMNFKTEPELEIEDFDCDDYEFKTEEQLKCSACENQFESRDLFCRHIITDHIEGNLCKLCNEVIDDSLFDHSVKHLPASDLDRLRTEYCQHCFKPFADLKLLRQHACPSNAPNRSDYNNEMEQNNYQSNVDIKETEDLIDSNMKHQCSVCSKIYGRKNSLTIHMRIHTGETPFQCEFCSEKFRLRHSLRVHMEIKHINELPDGKPKFQCTVCLKIFACKNHLVGHMLTHTGEKPLQCKFCSDKFRHKPSLVTHMKTLHPKEFETDKSEYQCSICSQGFSYNNDLVTHMRIHSDEKPFPCEFCSKKFRFRHMVRVHMEKKHTNELPDGKPTYQCNVCSKVFGYNSDLIRHMRSHTDEKPFQCKLCLNNFRYRHLLRVHMEKKHIDELPIDKPKFQCNICSKIFGYNNSLIRHMRMHTGEKPFQCKLCPEKFQHKHVMRVHMETKHINELPDCKPKNQCTFCFKIFDYGRSLRTHLETKHSNELPADKPPKFQCHLCSKAFAGNNHLLRHILVHTGEKPFKCQICTNAYRSNKELNRHLRMKHTTDNMIGKDSQSLADTQQLF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00324668;
- 90% Identity
- iTF_00324668;
- 80% Identity
- iTF_00324668;