Ctib024843.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Chorisops tibialis
Gene Symbol
ZFX
Assembly
GCA_963669355.1
Location
OY770263.1:158079855-158094314[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.092 10 8.2 0.3 2 23 149 171 148 171 0.96
2 17 1.7 2e+02 4.2 2.6 2 20 208 226 208 227 0.93
3 17 0.059 6.7 8.8 1.4 2 23 336 358 335 358 0.96
4 17 0.06 6.8 8.7 2.4 2 19 395 412 395 414 0.93
5 17 2.7e-05 0.003 19.3 1.7 1 23 452 474 452 474 0.98
6 17 0.00092 0.1 14.5 2.9 1 23 480 503 480 503 0.97
7 17 0.036 4.1 9.4 3.1 1 23 514 536 514 536 0.99
8 17 0.0084 0.94 11.4 3.4 2 23 543 565 542 565 0.97
9 17 5.1e-06 0.00057 21.6 0.5 1 23 576 598 576 598 0.99
10 17 0.0087 0.98 11.4 4.3 1 23 604 627 604 627 0.96
11 17 1.2e-07 1.3e-05 26.7 0.7 1 23 638 660 638 660 0.99
12 17 0.018 2 10.4 4.4 1 23 666 689 666 689 0.97
13 17 1.3e-06 0.00014 23.5 0.9 1 23 700 722 700 722 0.99
14 17 0.012 1.3 11.0 4.7 1 23 728 751 728 751 0.98
15 17 0.035 3.9 9.5 1.6 2 23 763 785 762 785 0.97
16 17 3.3e-05 0.0037 19.0 2.0 1 23 797 819 797 819 0.98
17 17 6e-05 0.0067 18.2 1.9 1 23 825 848 825 848 0.98

Sequence Information

Coding Sequence
ATGTTCCCACTTTTCGATGCAAATGTGAAACTGGTGGACGAGAAATTTCGTAGTGCTGTTGAAATGTTGGAAACCTTCACTTCTGTCCCGATTAACAATAAAGACTACTTACCTGATCACATTTGTGGCACCTGCCTTAACGAAATTCATCGTGCATATTCATTCAAGAGGAAATGTGAAAAATCAGAAATGCTTCTGAATCAACTGAAAAAAGTTGATATTACCTTTGAAAAACTAATAGATCTTTCAAACCGGATTGGAATTGATAGCGAACTTATAGGCACCTGTGAAATTCAAAGTATTGTAAAAGAAGAACTAGAGGAAACACAATTTGCGGAAGTTGAATGTGTACCAGACGTAcaaatgaattttaaaattgagcCCAAATTGGAAATTAAAGATAGCGATTGCGACGACAACGAATACAAGACTGAAGAGCAATTGAAATGTTCGGCTTGTGAAAACCAATTTGAATCACTTGATTTATTCTCCAGACATATACTTACTGATCATATAGAAGAAAATTTGTGCAAACTTTGCAATGAAGaaatttatgGCAGCTTATTTGATCATTCGGTCAAACATCTTTCGACAAGCAATTTGGCTGAAATAAAAGCGGAATATTGTCAACATTGCTTTAAGCTCTTTGCagatatgaaaatgttaaagctaCATGTATGTCCGTCAAATGCATCTAATAGATCCTATACCAATAATGAAATGAAACAAAACACCCATCAAAGCAATGTGAACATTAAAGAGACAGGAGATCTTATTGATATTACCTTAGAAAAACGAATAGATCTCTTTAATCGGAATGGGATTGATAGCGAATTTATAGGCACTTGTAAAATTCAAAGCAGTGTAAATGCAGAACTACAGAAAACCAAATTTGCGGAAGTTGAATGTGTACCAGACGTACAAATGAATTTTAAAACTGAGCCTGAGTTGGAAATTGAAGATTTCGATTGCGACGACTATGAATTCAAAACTGAAGAGCAATTGAAATGTTCGGCTTGTGAAAACCAATTTGAATCACGTGATTTATTCTGCCGACATATAATTACTGATCATATAGAAGGAAATCTATGCAAACTTTGCAATGAAGTAATTGACGATAGCCTATTTGATCATTCGGTCAAACATCTTCCGGCAAGCGATTTGGATAGATTAAGAACTGAATATTGTCAACATTGCTTTAAACCCTTTGCAGATTTGAAATTGTTAAGGCAACATGCGTGTCCATCAAATGCACCGAATAGATCCGATTACAATAATGAAATGGAACAAAACAACTATCAAAGCAACGTAGACATTAAAGAGACTGAAGATCTTATTGATTCAAATATGAAACATCAATGTAGCGTTTGCTCGAAAATTTATGGTCGTAAGAATAGTCTAACTATTCACATGCGTATCCATACAGGTGAAACTCCGTTTCAATGCGAATTTTGCTCGGAAAAATTTCGACTTAGACATTCTCTCCGCGTTCATATGGAAATTAAACACATAAATGAATTACCTGACGGTAAGCCAAAGTTTCAGTGCACCGTCTGTTTGAAAATCTTTGCTTGTAAAAACCATCTAGTCGGTCATATGCTTACCCATACAGGCGAGAAACCATTACAATGTAAATTCTGTTCGGACAAATTTCGACACAAACCATCGCTAGTTACGCATATGAAAACGTTACatccaaaagaatttgagaccgATAAGTCGGAATATCAATGCAGTATTTGTTCGCAAGGTTTCAGCTATAACAACGACTTAGTAACTCATATGCGTATCCATAGCGACGAGAAGCCGTTTCCGTGTGAATTTTGTTCTAAAAAGTTCAGATTCAGGCATATGGTACGAGTTCACATGGAAAAGAAGCACACGAATGAATTGCCTGATGGTAAACCGACATATCAATGTAACGTTTGTTCGAAAGTGTTTGGTTACAATAGCGATTTAATAAGGCATATGCGTAGTCATACAGATGAGAAACCGTTTCAGTGTAAACTATGCTTGAATAATTTCCGGTACAGACATTTGCTAAGAGTTCATATGGAAAAGAAACACATAGATGAATTGCCCATTGATAAACCAAAATTTCAGTGTAACATTTGttcgaaaatttttggataCAACAACAGTTTAATCAGACACATGCGTATGCATACTGGCGAGAAACCATTTCAATGTAAATTGTGTCCagaaaaatttcaacataaGCATGTGATGCGGGTCCATATGGAAACGAAACACATAAATGAATTGCCCGATTGTAAACCGAAAAATCAATgtactttttgttttaaaattttcgattacGGCAGATCGCTGAGAACCCATTTGGAAACAAAACATTCGAATGAATTGCCTGCCGATAAACCACCAAAGTTTCAGTGTCACTTGTGCTCGAAAGCATTTGCTGGAAATAACCATCTGCTCAGACATATACTTGTACACACTGGCGAGAAGCCATTCAAATGTCAAATATGTACAAACGCATATCGAAGTAATAAGGAATTAAATCGGCATCTACGAATGAAGCACACCACTGATAATATGATCGGCAAAGACAGTCAAAGCCTAGCTGACACTCAGCAATTATTTTGA
Protein Sequence
MFPLFDANVKLVDEKFRSAVEMLETFTSVPINNKDYLPDHICGTCLNEIHRAYSFKRKCEKSEMLLNQLKKVDITFEKLIDLSNRIGIDSELIGTCEIQSIVKEELEETQFAEVECVPDVQMNFKIEPKLEIKDSDCDDNEYKTEEQLKCSACENQFESLDLFSRHILTDHIEENLCKLCNEEIYGSLFDHSVKHLSTSNLAEIKAEYCQHCFKLFADMKMLKLHVCPSNASNRSYTNNEMKQNTHQSNVNIKETGDLIDITLEKRIDLFNRNGIDSEFIGTCKIQSSVNAELQKTKFAEVECVPDVQMNFKTEPELEIEDFDCDDYEFKTEEQLKCSACENQFESRDLFCRHIITDHIEGNLCKLCNEVIDDSLFDHSVKHLPASDLDRLRTEYCQHCFKPFADLKLLRQHACPSNAPNRSDYNNEMEQNNYQSNVDIKETEDLIDSNMKHQCSVCSKIYGRKNSLTIHMRIHTGETPFQCEFCSEKFRLRHSLRVHMEIKHINELPDGKPKFQCTVCLKIFACKNHLVGHMLTHTGEKPLQCKFCSDKFRHKPSLVTHMKTLHPKEFETDKSEYQCSICSQGFSYNNDLVTHMRIHSDEKPFPCEFCSKKFRFRHMVRVHMEKKHTNELPDGKPTYQCNVCSKVFGYNSDLIRHMRSHTDEKPFQCKLCLNNFRYRHLLRVHMEKKHIDELPIDKPKFQCNICSKIFGYNNSLIRHMRMHTGEKPFQCKLCPEKFQHKHVMRVHMETKHINELPDCKPKNQCTFCFKIFDYGRSLRTHLETKHSNELPADKPPKFQCHLCSKAFAGNNHLLRHILVHTGEKPFKCQICTNAYRSNKELNRHLRMKHTTDNMIGKDSQSLADTQQLF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00325032;
90% Identity
iTF_00325032;
80% Identity
iTF_00325032;