Basic Information

Insect: Chorisops tibialis
Gene Symbol: -
Assembly: GCA_963669355.1
Location: OY770264.1:187016992-187026805[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 7.8e-05 0.0087 17.9 2.7 1 23 395 417 395 417 0.97

2 18 2e-05 0.0023 19.7 0.3 1 23 423 445 423 445 0.97

3 18 7.8e-05 0.0087 17.8 1.7 1 23 451 473 451 473 0.98

4 18 5.5e-05 0.0062 18.3 3.0 1 23 479 501 479 501 0.97

5 18 0.00024 0.027 16.3 4.7 1 23 507 529 507 529 0.99

6 18 0.00013 0.014 17.2 5.7 1 23 535 557 535 557 0.97

7 18 6e-07 6.8e-05 24.5 4.3 1 23 563 585 563 585 0.98

8 18 2.3e-07 2.5e-05 25.8 2.4 1 23 591 613 591 613 0.97

9 18 0.0003 0.034 16.0 5.7 1 23 619 641 619 641 0.97

10 18 0.00012 0.014 17.3 6.4 1 23 647 669 647 669 0.98

11 18 3.2e-05 0.0036 19.0 4.7 1 23 675 697 675 697 0.98

12 18 2.4e-05 0.0027 19.5 7.1 1 23 703 725 703 725 0.98

13 18 5.4e-06 0.00061 21.5 7.1 1 23 731 753 731 753 0.97

14 18 0.0011 0.13 14.2 10.0 1 23 759 781 759 781 0.97

15 18 0.00042 0.047 15.5 9.5 1 23 787 810 787 810 0.95

16 18 0.00021 0.024 16.5 0.4 1 23 816 838 816 838 0.97

17 18 0.0022 0.25 13.3 3.3 1 23 848 870 848 870 0.98

18 18 3.2e-05 0.0036 19.0 2.1 3 23 878 899 876 899 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	7.8e-05	0.0087	17.9	2.7	1	23	395	417	395	417	0.97
2	18	2e-05	0.0023	19.7	0.3	1	23	423	445	423	445	0.97
3	18	7.8e-05	0.0087	17.8	1.7	1	23	451	473	451	473	0.98
4	18	5.5e-05	0.0062	18.3	3.0	1	23	479	501	479	501	0.97
5	18	0.00024	0.027	16.3	4.7	1	23	507	529	507	529	0.99
6	18	0.00013	0.014	17.2	5.7	1	23	535	557	535	557	0.97
7	18	6e-07	6.8e-05	24.5	4.3	1	23	563	585	563	585	0.98
8	18	2.3e-07	2.5e-05	25.8	2.4	1	23	591	613	591	613	0.97
9	18	0.0003	0.034	16.0	5.7	1	23	619	641	619	641	0.97
10	18	0.00012	0.014	17.3	6.4	1	23	647	669	647	669	0.98
11	18	3.2e-05	0.0036	19.0	4.7	1	23	675	697	675	697	0.98
12	18	2.4e-05	0.0027	19.5	7.1	1	23	703	725	703	725	0.98
13	18	5.4e-06	0.00061	21.5	7.1	1	23	731	753	731	753	0.97
14	18	0.0011	0.13	14.2	10.0	1	23	759	781	759	781	0.97
15	18	0.00042	0.047	15.5	9.5	1	23	787	810	787	810	0.95
16	18	0.00021	0.024	16.5	0.4	1	23	816	838	816	838	0.97
17	18	0.0022	0.25	13.3	3.3	1	23	848	870	848	870	0.98
18	18	3.2e-05	0.0036	19.0	2.1	3	23	878	899	876	899	0.95

Sequence Information

Coding Sequence: ATGCTAATGACCTTCTCTCGACAGCAACAAGGCcatcaacagcaacaacatcaacagcaacaacaacagcagcagaccGGACATCAACAGGACGCGCGTATTGGAGGCGTTATTCAGTCCGTGAACGAGTCTGATATTAAACATCCCTTGCCCTTGGCTAACGCTCCACATCTCGGTAAATATTGGGTTGTTACCAATCTATTCCAAGGACCCGGTCAAAATACCACATATAATTTAACATCGCCTCCAACATCATCGACCAGTGTTGTTCTTCCGTCGTCGCAAACACAACAAACCCATACAACGATAGCCGGTTCAATGCTAAAGCTTGAAACGATCAAACAAGAAGATCCAAATATGCATCAGCGTCACGTTCAGCAACAAATCGTCACTGTCAGTGCACCGAACACGATTCAAATTCCGAATCCAATGATTGTCACGCAATCGCAACAACAAATGTCGAATGGCGGCACGTTGATTCAGAACAGTCAACAGCCGGAACATATTCAAGTTTCGGTCAATCCCGAAAACAGCATTATGATAATGGACACTTCAAATTCCAATAATAAATCGGATAAGATAAATATGAATAATCAAAATATGTCGGGCGGCGGCGAACCGATGCAAGTCGATCGTATCGTTCAACATCACAACAACATGCAGGATTCGATCAAAGAGGAAAAACCATTTGCCAATTGCAAAATATTGCCGCATCAGCAAATTCATTCGCATCATATAACCGGCGAACAGAAAATGACGCATTTGCCGCATCTATTGGATGTCAGGAATGCCGATGGATCGCTGATTAAAATCCAATCGAATCAGGAACAGGAAATTGGTAAATCGATGGGTGTCGAGATGTACAAAGTGAACATCGAAGATTTAAGTCAGTTCCTATCGTATCATGAAGTTTTTGGAAAGCTTCACGGCGACGTAATCACACATCCAATTTCGCATACGACTACGCACCCGACAAACACGATTAGCAACACGGTCGGCATTAAGACATCGACTTCGTCGAACGTTGCAGCCGGATCGAGTAATGCGACCGGCAATACCGAACTATTAATGCCGAAAATGGAAGCCGTAGCCCAAATGACTGGCATAACACAGAGCCATACTGCGAGCGGCGGAACAACAATGCATACTATTGGCGACGGCGGAACTATTACGCCGGCAACACATTCATGCGATATTTGCGGAAAAATGTTCCAATTCCGTTATCAATTGATCGTGCATCGGCGCTATCATAGCGAACGGAAACCGTTCATGTGTCAAGTGTGCGGCCAAGGATTCACATCGTCGCAGGATTTAACGCGACACGGAAAAATTCATATTGGTGGACCGATGTTTACGTGTAACGTTTGCTTTCATGTTTTCGCGAACGATGCCAGCCTGGAGCGTCACATGAAGCGACATTCGACCGATAAGCCGTTTGCATGCACCGTCTGTCAGAAAACATTTGCCCGAAAAGAACATCTCGATAATCATTTCCGAAGTCATACGGGCGAAACACCGTATCGCTGTCAGTTTTGTGCAAAGACGTTTACGCGCAAGGAGCACATGGTGAATCATGTCAGGAAGCATACTGGCGAAACACCGCATCGATGCGATATTTGCAAGAAGTCGTTTACGCGAAAGGAGCACTACGTTAATCATTACATGTGGCATACAGGCGAGACACCACATCAGTGCGAAGTTTGTGGCAAGAAATACACGCGAAAGGAACACTTGGCAAATCATATGCGTTCCCATACCAATGACACTCCTTTCCGATGCGAAATTTGCGGTAAAAGTTTTAGCCGAAAGGAGCATTTCACAAATCACATATTGTGGCACACTGGCGAAACTCCTCATCGTTGCGATTTTTGCGCTAAGACCTTTACACGTAAAGAGCATCTACTGAATCACGTCCGGCAGCATACAGGCGAATCGCCGCATCGTTGCACGTACTGTTTGAAAACATTTACACGTAAAGAGCATCTTGTTAATCATGTCCGGCAGCATACCGGTGAAACGCCGTTTAAGTGCACATTCTGCACAAAGGCGTTCACCCGCAAAGATCACATGGTTAATCATATTAGGCAGCATACAGGCGAATCTCCGCACAAGTGCACGTACTGCACGAAAACATTTACTCGCAAGGAGCATTTGGTCAATCATGTCCGTCAGCATACCGGCGAATCGCCACATCGCTGTTCGTACTGTAATAAGACGTTCACGCGAAAAGAACATCTAACGAATCATGTACGTTTGCATACTGGCGATTCACCGCACAAATGTGAATGTTGTCAGAAAACGTTTACGCGAAAGGAGCACCTGAATAACCATATGAGACAGCATTCGAGTGATAATGCTCACTGCTGTAATGTTTGTAATAAGCCGTTTACACGGAAGGAACATCTTATAAACCACATGTCACGGTGCCATACCGGAGATCGGCCGTTTGCCTGTGAAACATGCGGAAAGTCGTTCCCGCTCAAAGGAAATTTAATCTTCCATCAACGTAGCCATACTAAAGGTCAGGATGTTGAGCGGCCGTTTAGATGCGAGAAATGTCCAAAAGATTTCATTTGCAAAGGACATTTGGTATCGCATATGCGAGCACATTCGGGCGAAAAACCGCATCTCTGCACGCTCTGTAGTAAGGCTTTTGTCGAAAAGGGCAATTTAAAGCGTCACATGAAAATGAATCATCCAAACGCCGTAATACCGCCACTTGGACTAACGCAAGTCATCAAGACGGAAACGAATCCGATAACGATTGCTCCCGTTCcgcaatacaatacaataaagGCGGAAGTGAATCCCACCACTATGGCAACCGCGCCACAATACATGAACGAACGTATACAATTGCTGACGAAAGCCAATCTGCTTCCGATCAATCCGTTAATTCCGCATCAGGCACCAACAATGCATACCATACAGCAGATCACAGCAACTTCGGCCAATTCAACAATTAGCAATAATACGAGTTCGTTATCGGCCGGTCTAGTGCCAATTGTTACGTCGACTATAACATCACATACCAGTCAACAGCAGCATGTAACATCGCAAATAcatcaacaacagcagcagcagcagcaatcgcagcagcagcagcaacaacaacagcaacaacaacaacagcatcatcaacaacaacagcaaaacTCCAGCCAAACACCGGATCCGACACAAACAGTTCCGATTGCCATCATACAAGCTGGCGATCCGGCAACAATAACACGCGGTTCGATTCAATTGCAACATTTACCGGCTGGTGTCGACCAACACTCGGTGGTCTATTGA
Protein Sequence: MLMTFSRQQQGHQQQQHQQQQQQQQTGHQQDARIGGVIQSVNESDIKHPLPLANAPHLGKYWVVTNLFQGPGQNTTYNLTSPPTSSTSVVLPSSQTQQTHTTIAGSMLKLETIKQEDPNMHQRHVQQQIVTVSAPNTIQIPNPMIVTQSQQQMSNGGTLIQNSQQPEHIQVSVNPENSIMIMDTSNSNNKSDKINMNNQNMSGGGEPMQVDRIVQHHNNMQDSIKEEKPFANCKILPHQQIHSHHITGEQKMTHLPHLLDVRNADGSLIKIQSNQEQEIGKSMGVEMYKVNIEDLSQFLSYHEVFGKLHGDVITHPISHTTTHPTNTISNTVGIKTSTSSNVAAGSSNATGNTELLMPKMEAVAQMTGITQSHTASGGTTMHTIGDGGTITPATHSCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTSSQDLTRHGKIHIGGPMFTCNVCFHVFANDASLERHMKRHSTDKPFACTVCQKTFARKEHLDNHFRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGETPHQCEVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCAKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHVRQHTGETPFKCTFCTKAFTRKDHMVNHIRQHTGESPHKCTYCTKTFTRKEHLVNHVRQHTGESPHRCSYCNKTFTRKEHLTNHVRLHTGDSPHKCECCQKTFTRKEHLNNHMRQHSSDNAHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLIFHQRSHTKGQDVERPFRCEKCPKDFICKGHLVSHMRAHSGEKPHLCTLCSKAFVEKGNLKRHMKMNHPNAVIPPLGLTQVIKTETNPITIAPVPQYNTIKAEVNPTTMATAPQYMNERIQLLTKANLLPINPLIPHQAPTMHTIQQITATSANSTISNNTSSLSAGLVPIVTSTITSHTSQQQHVTSQIHQQQQQQQQSQQQQQQQQQQQQQHHQQQQQNSSQTPDPTQTVPIAIIQAGDPATITRGSIQLQHLPAGVDQHSVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00202842;
90% Identity: iTF_00203760;
80% Identity: -