Basic Information

Insect: Beris morrisii
Gene Symbol: -
Assembly: GCA_951812415.1
Location: OX638312.1:13633341-13649484[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 5.5e-05 0.0067 17.7 2.7 1 23 469 491 469 491 0.97

2 18 1e-05 0.0013 20.0 0.4 1 23 497 519 497 519 0.97

3 18 5.5e-05 0.0067 17.7 1.7 1 23 525 547 525 547 0.98

4 18 3.9e-05 0.0047 18.2 3.0 1 23 553 575 553 575 0.97

5 18 0.00017 0.021 16.2 4.7 1 23 581 603 581 603 0.99

6 18 9.2e-05 0.011 17.1 5.7 1 23 609 631 609 631 0.97

7 18 4.3e-07 5.2e-05 24.4 4.3 1 23 637 659 637 659 0.98

8 18 1.6e-07 2e-05 25.7 2.4 1 23 665 687 665 687 0.97

9 18 0.00022 0.026 15.9 5.7 1 23 693 715 693 715 0.97

10 18 8.6e-05 0.01 17.1 6.4 1 23 721 743 721 743 0.98

11 18 2.3e-05 0.0028 18.9 4.7 1 23 749 771 749 771 0.98

12 18 1.7e-05 0.0021 19.4 7.1 1 23 777 799 777 799 0.98

13 18 3.8e-06 0.00047 21.4 7.1 1 23 805 827 805 827 0.97

14 18 0.00081 0.099 14.1 10.0 1 23 833 855 833 855 0.97

15 18 0.0003 0.036 15.4 9.5 1 23 861 884 861 884 0.95

16 18 0.00015 0.018 16.4 0.4 1 23 890 912 890 912 0.97

17 18 0.0016 0.19 13.2 3.3 1 23 922 944 922 944 0.98

18 18 2.3e-05 0.0028 18.9 2.1 3 23 952 973 950 973 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	5.5e-05	0.0067	17.7	2.7	1	23	469	491	469	491	0.97
2	18	1e-05	0.0013	20.0	0.4	1	23	497	519	497	519	0.97
3	18	5.5e-05	0.0067	17.7	1.7	1	23	525	547	525	547	0.98
4	18	3.9e-05	0.0047	18.2	3.0	1	23	553	575	553	575	0.97
5	18	0.00017	0.021	16.2	4.7	1	23	581	603	581	603	0.99
6	18	9.2e-05	0.011	17.1	5.7	1	23	609	631	609	631	0.97
7	18	4.3e-07	5.2e-05	24.4	4.3	1	23	637	659	637	659	0.98
8	18	1.6e-07	2e-05	25.7	2.4	1	23	665	687	665	687	0.97
9	18	0.00022	0.026	15.9	5.7	1	23	693	715	693	715	0.97
10	18	8.6e-05	0.01	17.1	6.4	1	23	721	743	721	743	0.98
11	18	2.3e-05	0.0028	18.9	4.7	1	23	749	771	749	771	0.98
12	18	1.7e-05	0.0021	19.4	7.1	1	23	777	799	777	799	0.98
13	18	3.8e-06	0.00047	21.4	7.1	1	23	805	827	805	827	0.97
14	18	0.00081	0.099	14.1	10.0	1	23	833	855	833	855	0.97
15	18	0.0003	0.036	15.4	9.5	1	23	861	884	861	884	0.95
16	18	0.00015	0.018	16.4	0.4	1	23	890	912	890	912	0.97
17	18	0.0016	0.19	13.2	3.3	1	23	922	944	922	944	0.98
18	18	2.3e-05	0.0028	18.9	2.1	3	23	952	973	950	973	0.95

Sequence Information

Coding Sequence: ATGAATTCCGAACATTCTGTGAGTGTGGAAAGCGGCGGCGAGCCGCAAATTCGTCACTCGCCCTCGCAGCcccaacaacagcagcagcagcaccaccatcaacagcagcagcagcaacaacaacagcagcactCCCAACACCCGCGTCATCCGCATCAGCAGCCGCTCGACGAGAAGATGATAATGACCTTCTCTCGACAGCAACAAGCCcatcaacaacagcagcaacagcaacaaAACCAAcatcagcaacaacaacaacagcagcagcaacaacaacagcagcagcagcagcagcagcaacaacaacaacaacaacagtccGGACAACATCAGCAGGACGCGCGAATTACTGGTGTTATTCAGCCAGTGAGCGAGGCTGATATCAAGCATCCGTTGCCACTGGGTGCCACTCCACATCTCGGTAAGTACTGGGTAGTGACTAATCTTTTCCAAGGACCTGGTCAGAATACCACCTACAATATAACGTCGCCTCCGACATCGACCGGAGTCGTTCTACCGGCCCAAACTCCACAAACCCATACCACAATAGCCGGATCGATGCTGAAATTGGAAACTATCAAGCAAGAAGATCCAAACATGCATCAACGTCACGTTCAGCAACAAATCGTTACAGTAAGTGCGCCCAACACAATACAAATACCGAATCCGATGATTGTAACGCAATCGCAACAAATGTCGAACGGAACGTTGATTCAGAACAATCAACAAGCCGAACATATTCAAGTTTCGGTCAATCCCGAAAACAGTATAATGATAATGGACACGTCGAACTCCAATAATAAGTCGGACAAACTGATGAACAATCAGAACATGTCGAATGCGGAACCGATGCAAGGCGTCGAACGTATCGTACAGCATCATTCGATGCAGGAATCGATAAAAGAGGAGAAGCCCTTTGCCAATTGCAAAATACTGCCGCATCAGCAAATCCATTCGCATCATATAACCGGCGATCAGAAAATGCATTTGCCGCATTTGTTGGACGTTAGAAATGCGGACGGATCGCTCATTAAGATTCAATCGCAGGAGCAAGAGATCGGTAAATCGATGGGCGTTGAGATGTACAAAGTGAACATCGAAGATTTGAGCCAGTTCCTATCATATCACGAAGTTTTCGGTAAACTACACGGCGATGTAATCACTCATCCAATTTCGCATACCAGTGCGCATCCAACAAATACAATCACCAATACGGTCGGAATTAAGACATCGAATGCGGTTAATGTAACGGCCGGTTCGAGTAATGCTACAGCTTCCGGCGAACTGATAATGCCGAAAATGGAAGCTGTTGCACAAATGACCGGCATCTCACAGAGTCATACAGCAGCGTCCGGTAATCTTCATACGATCGGTGACGCTGGAAGTATAACGCCGGCAACACATTCGTGCGATATTTGCGGAAAAATGTTCCAATTTCGATATCAATTGATCGTACATCGTCGCTATCATAGCGAACGAAAGCCGTTTATGTGTCAAGTGTGCGGTCAGGGTTTTACAACCTCGCAGGATTTGACGCGACACGGAAAAATCCATATCGGCGGTCCGATGTTTACGTGTAACGTTTGCTTTCATGTATTCGCGAACGATGCCAGTCTCGAGCGTCACATGAAACGCCATTCGACCGATAAACCGTTTGCATGTACCGTTTGTCAGAAGACGTTCGCTCGAAAAGAGCATCTCGATAATCATTTCCGTAGTCATACCGGCGAGACACCGTATCGTTGTCAGTTTTGTGCGAAAACCTTTACACGTAAGGAGCACATGGTGAATCATGTCCGGAAGCATACCGGCGAGACACCGCATCGTTGCGATATTTGTAAGAAGTCGTTTACGCGAAAGGAGCACTACGTTAATCATTACATGTGGCATACTGgtGAAACACCACATCAGTGCGAAGTTTGTGGCAAGAAATACACTCGAAAGGAACATTTGGCAAATCATATGCGTTCCCATACCAATGACACTCCGTTTCGATGCGAAATTTGCGGTAAAAGTTTCAGCCGAAAGGAACATTTCACAAATCATATATTGTGGCATACAGGCGAGACACCCCATCGTTGCGATTTCTGCGCTAAAACCTTCACTCGCAAAGAGCATCTTCTGAATCACGTCCGACAGCATACAGGCGAATCGCCGCATCGCTGTACCTATTGCTTGAAGACGTTCACGCGTAAAGAACACCTCGTCAATCACGTACGCCAACATACCGGCGAGACACCATTCAAGTGCACGTTCTGTACGAAAGCGTTCACTCGCAAAGATCATATGGTCAATCATATTAGGCAGCATACAGGCGAATCTCCGCACAAGTGTACGTACTGTACGAAAACTTTTACACGCAAGGAGCATCTTGTGAATCACGTTCGTCAGCACACCGGCGAATCGCCGCATCGTTGCTCGTACTGTAATAAAACTTTCACGCGTAAAGAGCACCTTACGAATCACGTACGTTTGCATACTGGCGATTCGCCGCACAAGTGCGAATGTTGTCAGAAAACCTTTACGCGAAAGGAACATCTCAACAATCACATGCGACAACATTCGAGCGACAATGCTCATTGTTGTAATGTGTGTAATAAGCCGTTTACGCGAAAGGAACATCTCATCAATCACATGTCGCGCTGCCATACCGGTGATCGACCGTTTGCCTGTGAGACTTGCGGAAAATCGTTTCCGCTTAAAGGAAACTTGATTTTCCATCAACGAAGCCATACTAAAGGTCAGGATGTTGAGCGTCCATTCCGTTGTGAGAAGTGCCCAAAAGATTTCATATGCAAAGGACATTTGGTATCACATATGCGAGCTCATTCAGGCGAAAAACCGCATCTGTGCACGCTATGCAGCAAGGCATTCGTTGAAAAGGGCAATCTAAAGCGTCACATGAAAATGAATCATCCGAACGCTGTTATACCACCGCTCGGTCTAACACAAGTCATCAAAACCGAAACGAATCCCATCGCTCTTGCTGCCGTTCCGCAATACAATTCAATTAAGACCGAAGTGAATCCAACGACTATGGCAACCGCTCCGCAATACATGAACGAACGCATTCAATTGCTTACCAAAGCCAATCTTATCCCAATCAATCCGTTGATTCCACATCAAGCGCCTACAATGCATACAATACAGCAAATAACTGCAACGTCGGCTAATTCAACGATCAGCAATAATACGAGTTCGTTGTCCGGCGGTCTAGTGCCAATTGTTACATCGACAATTACATCACATACCAGTCAACAGCAACATGTAACGGCGCAAATTCAACAACAGCAATCacaacagcagcaacagcaacaacatcatcaacagcagcaacaacaacagcagcagcagcagcaacaacaacaacaacaacaacagcaacatcaAAACAACAGCCAAACACCGGATCCAACACAAACGGTACCGATCGCTATTATCCAGGCTGGCGATCCAACAACTATTACACGAGCATCGATTCAACTACAACATTTGCCGGCCGGTGTTGATCAACATTCGGTTGTTTATTGA
Protein Sequence: MNSEHSVSVESGGEPQIRHSPSQPQQQQQQHHHQQQQQQQQQQHSQHPRHPHQQPLDEKMIMTFSRQQQAHQQQQQQQQNQHQQQQQQQQQQQQQQQQQQQQQQQQQSGQHQQDARITGVIQPVSEADIKHPLPLGATPHLGKYWVVTNLFQGPGQNTTYNITSPPTSTGVVLPAQTPQTHTTIAGSMLKLETIKQEDPNMHQRHVQQQIVTVSAPNTIQIPNPMIVTQSQQMSNGTLIQNNQQAEHIQVSVNPENSIMIMDTSNSNNKSDKLMNNQNMSNAEPMQGVERIVQHHSMQESIKEEKPFANCKILPHQQIHSHHITGDQKMHLPHLLDVRNADGSLIKIQSQEQEIGKSMGVEMYKVNIEDLSQFLSYHEVFGKLHGDVITHPISHTSAHPTNTITNTVGIKTSNAVNVTAGSSNATASGELIMPKMEAVAQMTGISQSHTAASGNLHTIGDAGSITPATHSCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCNVCFHVFANDASLERHMKRHSTDKPFACTVCQKTFARKEHLDNHFRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGETPHQCEVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCAKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHVRQHTGETPFKCTFCTKAFTRKDHMVNHIRQHTGESPHKCTYCTKTFTRKEHLVNHVRQHTGESPHRCSYCNKTFTRKEHLTNHVRLHTGDSPHKCECCQKTFTRKEHLNNHMRQHSSDNAHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLIFHQRSHTKGQDVERPFRCEKCPKDFICKGHLVSHMRAHSGEKPHLCTLCSKAFVEKGNLKRHMKMNHPNAVIPPLGLTQVIKTETNPIALAAVPQYNSIKTEVNPTTMATAPQYMNERIQLLTKANLIPINPLIPHQAPTMHTIQQITATSANSTISNNTSSLSGGLVPIVTSTITSHTSQQQHVTAQIQQQQSQQQQQQQHHQQQQQQQQQQQQQQQQQQQQHQNNSQTPDPTQTVPIAIIQAGDPTTITRASIQLQHLPAGVDQHSVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00202842;
90% Identity: iTF_00324623; iTF_00202842;
80% Identity: -