Cten000582.1
Basic Information
- Insect
- Chironomus tentans
- Gene Symbol
- sip1
- Assembly
- GCA_963573255.1
- Location
- OY754302.1:6246654-6249119[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-81 2.3e-77 260.5 13.5 1 275 382 648 382 648 0.97 2 2 0.33 3.4e+03 -2.4 0.0 4 188 661 690 653 723 0.60
Sequence Information
- Coding Sequence
- atggaaGAAGAGTACGAGAAATTCGAAATAACTGATTACGATATTGACAATGAGTTTAATCCTAATAGAAACAGGAAAAAGTTCACGAAAAATCAGCAGATTTATggtGTTTGGGCAGATAGCGACGATGATGCAGTGGAACTGGAAATGAAAGGATCAAAAGGTGGTCGAAAAACCTTTAAAGATTATACAGCACCAGTTAGTTTCGTTTCTGGCGGAGTACAACAGTCTGGCAAGAAGAAAGAGGATgctaagaaaaagaaaagtgacgatgatgaggatgatgaGACATCTCATACTGGATTTGgattccaaaaaaagaaagattcTAGTGACTCATCAGACGAAGAAGTTCGTCCAACATTTCAGCCTAAGGAAGTGGCTGGTATGCGACAAATGAAAGGATCTATGTCTAATAAAGGATTAGGAAATTGGGAGCAGCATACGAGAGGAATTGGTGCTAAACTTTTACTTCAAATGGGTTTTCAACCAGGCAAAGGTTTAGGAAAAGAATTACAAGGTATTGCAGCTCCTGTTGAAGCTCACGTAAGAAAAGGACGTGGTGCTATTGGAGCTTACGGACCTGAGAAGAAGACAAAAGTTGCTGAATTAAAGCCTACAAAGAAGCAAGATGATGAGAAGAAGGATGGCAAGtctgaagaatttaaaaagcaaTGGTCGAAAAAAGGACACAAAAAACGTTATTTCTATAAAAGTGTTGAAGATGTGattgaaaaaggaaagaagcCTGACTATATGCTGTACGATAGTGGCAACAAGTTAAGTAAAGTTACAGTTATTGACATGACAGGGCCTGAAAAGCGAGTATTGAGTGGATATCATGCATTAAACCAAATGAAAGTCACAGACGATGATCATTTAGTAGAAATGAAACAACCAGACCTTAAACACTTCCAATTACCCGAACTAATGCATAATTTAACGTTAATAGTCAATATGTGTGAACAGGATATAATTTCGAATGATAAAAGGCAACGAACAGCTGAAGAAAGGCAAAAGACgatcaaaaatgagaaagaacaGCTTGAGAAAATTGTAGTATTAGAGAAAAAGTATATTGAGACATTAGAGGATGTAGAGGAACTTGTTGCAAAACTTGTGGACACAGAAAGTCCACCAAGCTTAGATGATGctgaaacaattttcatagaaTTAAAAGTAACATTTCCGAATGAATtcaaggaatttaatttaccTGATTTAGCACCAACTGTCATAGCACCGCTAATAAGTCTGAATATAAAGGATTGGAAACCATTAGAGGAACCAACaaagcatataaaaataattaggaAATGGGCTGGTTTATTGGATTACTCAAAATCAGCAACAACGACATTTTTTGATCCTTATGAAGCACTCGTTTGGTCGTGTATTGTTCCTTACTTCAGACAAGCTGCAAACGAATGGAATCCAAAGAATCATTCACAAATGGCAGCATTACTTGATGCATGGTCAGCACTTATGCCTGAAAGAATGCTTGATAATGTTCTTGAGCTAATTGTTTTAAGTCGATTGACACAGGCAGTCAATGAATGGGACCCACTAACGGATATTGTCCCAATTCATGAATGGATACTTCCATGGTCTGGATTATTAGGTGataaaatgcatgaaaatgtttacaaaacaATTTGTGATAAATTAAGTAAAGCTTTACGTGCTTGGATGCCACAAGATCGATCAGCACTGGCTATGATAAGGCCAtggaaaaatgtatttaaagaCGAAGACTTGcagatatttttacataaaaatgtaGTTCCAAAACTGGAGTTccgaattaatgaaattattattgatcCGCGTCAACAAGATTTGGAAATATTTAAGCAAGTTTATGACTGGAATGAGCTTTTAACACCTCAAATCATGGCAAATATCCTCGACAAATATTTCTTCCCAAAATGGATTCAAACTCTCGTTTTGTGGCTCAATCAATCGCCTAATTATGATGAAATCTCTCGATGGTATAAAGACTGGCAAAGTCAATTTAGTGAAGCTATTCTAAAGCAGCCAAACATCAATGAACATTTGAGACGAGCGCTTGATTTGATGAAACGTGCAACAGGCAAATATGTCCAGGAACCTGTAACTGTACCACAACTGCCATCACTAATGGAACTAAATATTCTACCGCCATCGACAATAAATCTTGAATTTAAGGAAATTGTCTCACAAAAATGTGCAGAACGAGGAATTATATTCGCACCAATGCCTGGACGACGTGAGAATGGAAAGCAAGTCTACAGACTTGGGAAGCTTTTTTGCTATTTCGATAAATCTGTGTGCTGTGTTAGTCCAGATCCAGGAAAGTCATCACAATGGATGCCAATGTCACTAAGTGTGATCCTCGAGAAAGCTAAGTGA
- Protein Sequence
- MEEEYEKFEITDYDIDNEFNPNRNRKKFTKNQQIYGVWADSDDDAVELEMKGSKGGRKTFKDYTAPVSFVSGGVQQSGKKKEDAKKKKSDDDEDDETSHTGFGFQKKKDSSDSSDEEVRPTFQPKEVAGMRQMKGSMSNKGLGNWEQHTRGIGAKLLLQMGFQPGKGLGKELQGIAAPVEAHVRKGRGAIGAYGPEKKTKVAELKPTKKQDDEKKDGKSEEFKKQWSKKGHKKRYFYKSVEDVIEKGKKPDYMLYDSGNKLSKVTVIDMTGPEKRVLSGYHALNQMKVTDDDHLVEMKQPDLKHFQLPELMHNLTLIVNMCEQDIISNDKRQRTAEERQKTIKNEKEQLEKIVVLEKKYIETLEDVEELVAKLVDTESPPSLDDAETIFIELKVTFPNEFKEFNLPDLAPTVIAPLISLNIKDWKPLEEPTKHIKIIRKWAGLLDYSKSATTTFFDPYEALVWSCIVPYFRQAANEWNPKNHSQMAALLDAWSALMPERMLDNVLELIVLSRLTQAVNEWDPLTDIVPIHEWILPWSGLLGDKMHENVYKTICDKLSKALRAWMPQDRSALAMIRPWKNVFKDEDLQIFLHKNVVPKLEFRINEIIIDPRQQDLEIFKQVYDWNELLTPQIMANILDKYFFPKWIQTLVLWLNQSPNYDEISRWYKDWQSQFSEAILKQPNINEHLRRALDLMKRATGKYVQEPVTVPQLPSLMELNILPPSTINLEFKEIVSQKCAERGIIFAPMPGRRENGKQVYRLGKLFCYFDKSVCCVSPDPGKSSQWMPMSLSVILEKAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00319681;
- 90% Identity
- iTF_00319681;
- 80% Identity
- -