Csup003240.1
Basic Information
- Insect
- Chilo suppressalis
- Gene Symbol
- lrrfip2_1
- Assembly
- None
- Location
- chr6:3913395-3962120[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-76 1.8e-72 243.9 22.9 1 297 29 335 29 337 0.86 2 2 0.47 3.5e+03 -3.3 7.7 1 35 334 368 334 381 0.85
Sequence Information
- Coding Sequence
- ATGGAGATGGATGCATCTCGGAGGCAACGCACCCAGACCAAGGCTACGGCCGAGGAGCAAGCCCTGGATCAAATTGCAAGAGAGGCGGAGCAGCGGCTGGCGGCGCGGCGAGCGGCGCGGGCCGAGGCGCGCGAGATCCGCATGCGAGAGCTGGAGCGGCAGCAGCGCGAGCAGGAGGACCATGCCGACAAGGCGTACGACATGTACGCCAACTCGGGCAGTCTGCGCGCCACCGTCGCTGACTTCAAAGATTCAGTGGGAAGGCGCGGCGCCACCCGGCTCTCTAGTTTAGGTTCGGGATCGCTGCACTCGCCGCGGCGCAGCTCTGAAGATTCCGCAGATGACACCTTTAGCATCAAGGACCTTAGGCATGAACTGAAAGAAGTGGAGGAGAAGTTCCGAAAGGCGATGATATTGAACGCGCAGCTTGACAACGACAAGGCCGCGCTCGGGTACCAGCTCGAACTGCTAAAGGACCGGATAGAGGAGTTGCATGAAGAGTACGCGCAGCTGCAGCGCGAGCACAGGGAGAAGTGTTCCGCGCACGAGCGTCTGAAGCGCGAGCACGCATCGCTGGAGCGGGAGGTGATGGCCGCGCGGGACGCGGTGCGGGCCCGGGACGCGGCCGCCGCGCATGCGGGATACGCTTTCGTGGACGCGGCCTGCGCACCGCAAGCCAACGGGGTCAACGGCCTCGCCGACGGGGAGGACAGCGCGCCCGGGTTCGGGTCAGTGCCGCCACTGGCGCTGGTGTCGCACCAGTCCGAGCAGATGCTTAACGAAGCTGGTGAAGGAACGTTAGACGTCCGGTTGCAGAAGCTCTTATCATCGAAGCTGGCGCTAGAGTCGGAGGTCCGCAAACTGAAGCTGCAACTGAACGAGGAACGAGCTGCGACCCACAACGGAGTGCACTCGCTGCACGACCAGGAATACGAGAACGAGCTTGAAACGTTACGACGTTGCGTGTCGGAAGCGAAAGCGCGCGCGGCGCGAGCGGAAGCCGAGGCGGCGCTCCAGGGGGCCGCCGTCGCCAGGCTCGAGGCGCAAGTGGCCAGGCTGCGGGCCCGCCAGGACCATCAGGACGAGCACGAGGAGCAGCTCAAGCTCGAGCGGCGCCGGCTGCAGCGCGAGGTGAGTGTGAGCCACTGA
- Protein Sequence
- MEMDASRRQRTQTKATAEEQALDQIAREAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYANSGSLRATVADFKDSVGRRGATRLSSLGSGSLHSPRRSSEDSADDTFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSAHERLKREHASLEREVMAARDAVRARDAAAAHAGYAFVDAACAPQANGVNGLADGEDSAPGFGSVPPLALVSHQSEQMLNEAGEGTLDVRLQKLLSSKLALESEVRKLKLQLNEERAATHNGVHSLHDQEYENELETLRRCVSEAKARAARAEAEAALQGAAVARLEAQVARLRARQDHQDEHEEQLKLERRRLQREVSVSH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00382635;
- 90% Identity
- -
- 80% Identity
- -