Cins000245.1
Basic Information
- Insect
- Chelonus insularis
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_013357705.1
- Location
- NW:672170-676402[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.3e-113 1.4e-109 365.3 34.2 3 300 31 325 28 325 0.97 2 3 0.016 1.7e+02 0.5 5.5 122 171 325 374 323 392 0.85 3 3 0.044 4.5e+02 -0.9 0.1 212 239 374 400 369 400 0.79
Sequence Information
- Coding Sequence
- atggAATCAACAATAGCTGGTCGCAGACGTGCTGCAACTAGACATGCAGCTGAAGATCAAGCTCTTGATCAAATCGCTAAAGAgGCAGGTGAAAGACTAGCAGCTCGGAGACAAGCAAGAGCAGAAGCTAGAGAAATTCGTATGAAAGAGTTAGAAAGACAGCAAAAAGAAGCTGAAGAAAACGCTGATAGAGTTTACGATATGTGTAATGTTGACGGAACTCGAACTATGAGGGTAACGCCAGACCCAATAAGGGCTTCACGGTTATTAACTAACTCTAACAGTTTTCAATCAAGTCGAAGGTCTTCCGAAGATTCTTTAGAAGAAGCTGGCCTAAGTAGAGATTTAAGAttaGAACTTAAGGAATTAGAAGAGAAGTTTAGAAAAGCAATGATTGCAAATGCTCAgcttgataatgaaaaatcatcgTATGTTTATCAAGTTGACTTGTTGAAAGATAAATTAGAAGAAACAGAAGAAGTTGTAGCGACATTACGGAGAGAATTCAGGGAAAAAAATCGAGAGGCTGAACAACTGAAGCGAGTTAatcaaagattaaaagaaGATTATGAGAATTGCAAAGCTCAATTAGAAGAAAGGGATAGGCTGATCCAAgaaaATGGGTTGGTTATTGTTGAAGATGAAGGTAGTGAAGATGAAGGAACTGGGGCATCAAATGGAATTCCAAGAAAAAGAGTACTAGTCAGTACAGAAGCTGcagaattattacaaaatgcTGGAGAAGGATCTCTggATGTACGGTTAAGAAAGTTTGCCTcggaaaaaaaagaactaaCAGATGAAATCCGACACCTAAGACTAGAATTGGAAGAGGCCAAGAGTCGTCAAAGATCCGAAAGATCATCCGGATCAGTATTAGgaTTAATAGATTCTGAAGATGTTCAGAGAGAAGCAAACAAATTACTGGcagattataaatttaaattacaaaaagctGAACAAGATATGTCCACACTTCAAGCAAATGTCACGAGATTGGAAACTCAAGTTATTCGATACAAATCAGCAGCAGAAGCATCAGAGAAAGCTGAAGATGAATTGAAAGTTGAGAAAAGAAAACTACAGAGAGAAattagAGAAGCACAGAGTCGTGTAGATGAGTTAGAAACAGCGAACAATCATCTTCAACGACGATTAGATAAACTGAAAATGGCAAAATCTACGTTGCTCAAAGAAATTTGA
- Protein Sequence
- MESTIAGRRRAATRHAAEDQALDQIAKEAGERLAARRQARAEAREIRMKELERQQKEAEENADRVYDMCNVDGTRTMRVTPDPIRASRLLTNSNSFQSSRRSSEDSLEEAGLSRDLRLELKELEEKFRKAMIANAQLDNEKSSYVYQVDLLKDKLEETEEVVATLRREFREKNREAEQLKRVNQRLKEDYENCKAQLEERDRLIQENGLVIVEDEGSEDEGTGASNGIPRKRVLVSTEAAELLQNAGEGSLDVRLRKFASEKKELTDEIRHLRLELEEAKSRQRSERSSGSVLGLIDSEDVQREANKLLADYKFKLQKAEQDMSTLQANVTRLETQVIRYKSAAEASEKAEDELKVEKRKLQREIREAQSRVDELETANNHLQRRLDKLKMAKSTLLKEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_00316783;
- 80% Identity
- -