Curb021882.1
Basic Information
- Insect
- Cheilosia urbana
- Gene Symbol
- sip1
- Assembly
- GCA_946477595.1
- Location
- CAMLCJ010000191.1:372243-376468[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-92 5.8e-88 296.3 13.3 4 275 396 660 393 660 0.97 2 2 0.11 2.4e+03 -0.9 0.0 157 190 672 704 665 714 0.69
Sequence Information
- Coding Sequence
- ATGTCGGACAATGAGTACGAAGCATTTGAAATCAACGACTATGATTTGGCGAATGAATTCAATCCGAATCGTCCACGACGGAAGCTGAccaaaaatcaacaaatttacgGAATATGGGCTGACAGTGACAGCGACAACGACAGCGAAGTTGAGATGACTGGTCGGCGCGGCAAAGGTCGCAGTTCTGGACCCGTAAACTTCGTGACCGGTGGCATTCAGCAGTCTGGCAGTTTTAAGAAAGACGAACAAGACAAGGACGACGACAACCAGATCACAGATGAAGAGGACGAACGCCCAGCACACCGGGCCGTCAAAGTGGACGACGATAACACGCCCAGTAACAGTTCATCGGAGGAAGAGGTAGCAGCCAAGCCCGCACGTATGGGTTTCGGCATGAAGCAGCCGCAAACTTCTTCCAGCAACAAACCTATGGGTGCATGGGAACAGCACACAAAGGGAATCGGTGCCAAATTGTTGCTGCAAATGGGCTACAAGCCTGGCAAGGGTTTGGGCAAAGACTTACAAGGTATTGCTCAACCCGTACAAGCACACTTGCGGAAGGGTCGTGGTGCAATTGGTGCTTATGGTCCCGAAACTCCAGCCACAATTGGTGATCAGGTGCAGCATAAACCAATAGAGGACCAAGACCTTCGCGAGGCAAAGGAGTTCAAAGACAAACTCAACAAATGGAAGCGTGATGACACCAAAAAGGAGACGAAAAAGAATCGCTACTACTACCGCAGCGTTGAGGAGGTGATCGAAAAGGGAAAGAAGTCCTCCAGCGGAATACTGTCGGACAAGCTGAGTAAGAAGCTGGGCAATGTGCCCGTGATTGATATGACTGGACCAGAGAAACGTGTCCTCAGCGGGTATCATGCGCTGGGACAGACAAAAATCGTTGATGAAGATCTGTACGAACACCAGGCTGCAAAGAAACCTACTGGATTCGCCCTGCCCGAGCTAATGCATAACCTCAATCTGATTGTGAACCGCTGCGAGCAGGATATCATTGCATTGGACAAGACAGAGCGGGAGGCCACCGACAGGCAAGAGGCACTCGAGTACGAGAAAAAGAATCTAGAAAAAATTGTGCGCTTGGAGAAGGATCACATTGATACACTCGAAAGAGCGCTCGTGCTGGTCGAGGAGCTCACCGGaaatccagaaaatttaagCCTCGTCCGTGCCGAGAAGATTTTCGTCGAATTACAACGAGATTTCGCCGCAGAGTACAAGGAGTTTGCATTGGGCGATTTGGCCGCTGGTGTCATAGCCCCCTTGGTCAACAATGAGCTAAAGTCCTGGAAACCACTAGAAGAACCAAAGCGATTCACCGACACCATCAAGAAGTGGAGAACCATTCTGGATGTGCACCAGTCAGAGGATCGTAAGAATGTCTTCGATCCGTACTCATCGCTGGTATGGGCTGGTGTCATACCGAGCTTTAGACTGACCGTGAACGATTGGAATCCTAAGATGCATCAGAAAATGGCAGCTCTTTTGGATAGCTGGGCTCCACTATTTCCCACTTGGGTGTTGGACAATGTGctggaacagctcattctgcctCGACTCATTGGAGGAGTCAAAGAATGGGACCCACTTACAGATACCGTGCCCATACACAGTTGGATTTTGCCGTGGAACAATATTTTGGGACACAAAATGGAAGAGTACATATTTCCCACCATTCGCGAGAAGTTGGGTAGCGCGCTACAGGCTTGGCTACCGCAAGATCGTTCGGCCAGAGCAATGCTTACGCCATGGAAGGGCGCGTTCGCTGCTGGAGAGATGCAGGCCTTTCTGCTGAAACACATCATTCCCAAGTTACAAATGGCATTAAGTGAGATGGTGATCAACCCCTTGCAGCAGGATTTGGAATTGTGGAATCAAGTTTGGGAATGGAACGAACTGATACCTCCTCTGCTAATGGGACAAATGCTCGACAAGTGCTTCTTCCCCAAATGGATGCAAGTTCTTGTTCTATGGCTAAATCAATCGCCAGACTTTGATCAAATCTCTCGATGGTATACCGGATGGAAGACAGTACTCGGTGAGGAATTGCTAAAACAGCCAATGATCAAGGAGCATCTCCGGCGAGCACTCGAAATGATGCACCGAGCAACTGAAACAGTATCAACATCTCAGTCGATACCCACTCCAGTTGCACCACCACAGTCAAAGCCAGCAGCGTCAGGTAGTTCTTCAACATGTCCCCCGGCGCTGATGGATCTGCAAATAGCGCCACCTACACAGTTGGAATTCAAGGAACTCGTATCGCAAAAGTGTGCAGAGCGTGGCGTGATATTTGCACCCATGCCAGGCCGCAGAGAATTTGGCAAACAGGTCTATCGAGTTGGAAAGCTGTTTTGCTACATCGACCGTAATGTGGTCATGCTGAGTGATGGCAGTTTGAAGAGTTGGACGCCGACTTCTCTGGGTCTGACAATAGAACGAGCTCTATCTGGATAA
- Protein Sequence
- MSDNEYEAFEINDYDLANEFNPNRPRRKLTKNQQIYGIWADSDSDNDSEVEMTGRRGKGRSSGPVNFVTGGIQQSGSFKKDEQDKDDDNQITDEEDERPAHRAVKVDDDNTPSNSSSEEEVAAKPARMGFGMKQPQTSSSNKPMGAWEQHTKGIGAKLLLQMGYKPGKGLGKDLQGIAQPVQAHLRKGRGAIGAYGPETPATIGDQVQHKPIEDQDLREAKEFKDKLNKWKRDDTKKETKKNRYYYRSVEEVIEKGKKSSSGILSDKLSKKLGNVPVIDMTGPEKRVLSGYHALGQTKIVDEDLYEHQAAKKPTGFALPELMHNLNLIVNRCEQDIIALDKTEREATDRQEALEYEKKNLEKIVRLEKDHIDTLERALVLVEELTGNPENLSLVRAEKIFVELQRDFAAEYKEFALGDLAAGVIAPLVNNELKSWKPLEEPKRFTDTIKKWRTILDVHQSEDRKNVFDPYSSLVWAGVIPSFRLTVNDWNPKMHQKMAALLDSWAPLFPTWVLDNVLEQLILPRLIGGVKEWDPLTDTVPIHSWILPWNNILGHKMEEYIFPTIREKLGSALQAWLPQDRSARAMLTPWKGAFAAGEMQAFLLKHIIPKLQMALSEMVINPLQQDLELWNQVWEWNELIPPLLMGQMLDKCFFPKWMQVLVLWLNQSPDFDQISRWYTGWKTVLGEELLKQPMIKEHLRRALEMMHRATETVSTSQSIPTPVAPPQSKPAASGSSSTCPPALMDLQIAPPTQLEFKELVSQKCAERGVIFAPMPGRREFGKQVYRVGKLFCYIDRNVVMLSDGSLKSWTPTSLGLTIERALSG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01542208;
- 90% Identity
- iTF_00312607;
- 80% Identity
- -