Csor019523.1
Basic Information
- Insect
- Cheilosia soror
- Gene Symbol
- hang
- Assembly
- GCA_948107745.1
- Location
- OX443563.1:61925187-61939630[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.051 6 8.2 1.3 3 23 471 492 470 492 0.93 2 17 0.02 2.4 9.5 2.7 1 23 663 686 663 686 0.91 3 17 0.0019 0.22 12.7 1.7 2 23 794 816 793 816 0.95 4 17 0.022 2.5 9.4 0.1 1 23 824 847 824 847 0.95 5 17 3.5e-05 0.0041 18.2 0.1 2 23 944 965 943 965 0.97 6 17 2.3e-05 0.0027 18.7 2.5 2 23 1023 1045 1022 1045 0.96 7 17 0.0052 0.61 11.3 0.3 2 23 1054 1076 1053 1076 0.95 8 17 0.00092 0.11 13.7 0.2 1 23 1089 1112 1089 1112 0.97 9 17 0.00039 0.046 14.9 1.0 1 23 1140 1162 1140 1162 0.99 10 17 0.0017 0.2 12.9 0.9 1 23 1170 1193 1170 1193 0.96 11 17 0.19 22 6.4 0.3 2 21 1201 1220 1200 1221 0.92 12 17 0.00016 0.018 16.1 0.5 3 23 1277 1297 1276 1297 0.98 13 17 7.5e-05 0.0088 17.1 0.2 1 23 1332 1354 1332 1354 0.98 14 17 7.9e-05 0.0092 17.1 0.2 2 23 1379 1401 1378 1401 0.93 15 17 0.096 11 7.3 0.2 2 19 1421 1438 1420 1440 0.93 16 17 0.0013 0.15 13.2 0.9 3 23 1456 1476 1456 1476 0.99 17 17 0.001 0.12 13.6 0.9 1 23 1613 1635 1613 1635 0.97
Sequence Information
- Coding Sequence
- ATGACGGAAGAATCAATATTACGTGCACGTCAGAATTGCTGTCGCTTGTGCTTGGCTCCGGACAGTGAATGTATTTCGATTTTTAGCAGCTACGCGGCTGATAAGGAGCCCCTAGCTACCAAAATTCAATCATGTGTCAATATTAAGGTGTCCCCAATTGATCGGCTTTCGCTGCGAATATGCCATGCTTGCATCAGCTACTTGAATTCGTGGCAGAGTTTCAAGAATCGATGTGTTGCCTCACAGAACAAGCAACGCAGCTGGCTAGAGATCTCGAAGAAATTCGAAAAGAAACAAATCGGCGCTTCTATACAGCTCACTGCTGCACCAGTGGGAATGTCCCATGATGAAATTGCAACAGGAGGAGGGGGTGATGAACATGACACCAGTCCACTTGCCACATCGATTTTAGAAGGAATTTCATCACTTAAGAAGCGACGCTCATTGACAGTCTACCCAATTCCGGTACACATTAAAGATGAACCAATGGACGAGGAGGAATACGATCCGAAACACGATGAGTCCGACATTGACCCTACACTTTTCTTGGAACGCACCGAAGAGGAAGGCTCGGACAATCTGTCACAGAAGGAACAACATTTGGCCTCTTTGGGCCTAAAACAAGCAACGAGTTCCGTCAACCCAATTAATTATTTGcCACAGAAAATGAGCGAGAACCAACGTGCAAGGAAACAAATGATTGTTTTCAGCGAGGAACAtcagaattttaatgaaatgtttGATAATTTCGCTACAGAGGAGGAGAGCAAACCTTTGATTGTTTCTCCGCAAGAAGAATTGTCTACAACTACAGCAGAACAGAATTCAATAGTTATTGACGAATGTAAAGAATTTAAGATTGTACATGTACAAGGCACAATTGACATTGGCAATGCTGGATCGGAACAAATTTGCGAAATTGAGACAGCTGCCAACACTATCCGCATCACCGATATGTTAGCAAGTACACAAAATGGTATCGCAAGCATTTCAGAAAGAATGCATAAGTTTGAGAACCGTTTCGATACATTCGTCGCTGAAACAAATGTCAAGCTTGATGGAATTTTGTTGAAAACCTGCGGAGAAATTTACATAACTGCAGATGCACAAAAAACGGATCTGATTCAAGATTTCAAATTTCCTTTAAATGAAGTCGGCGATGTTTTCCATTTGAACAAGAAAATCTCTTCAGATACGGGATTCAAATCTCAGTTGTTGGCACAGCTAAGCAGTATAGGCGGAAAAACAAGAACTGTTGATGGTGGAAAACTAATATATAAATTAATTGATCACCTGTTCCATCCAGAATTAATGaccgACTATAGCTTCGATGGAGATAAGATTCCACCGCCTTCAGTCGACAAATCCCTTGAAATCACCCCAGCAATCAATGAAGTTAAAGAGGCATCATGTCGTGCCTGCAATTTAAAATTCTCCACAAGAGCAAACGCCCGCCGTCATGAGCGCAACCTTCATCCACATCTTTTTACAAGCATTTCGCTCAGCACAATCCAACCTAAGGGGCTGAATGTCGTTTCGCCCATGCAACAAGGGATTAAAGGCGCTGGTCAAGTGATACGCGCCGCAATAAAACCCGAACAGCTGGGACTATATGACTATGATCAACCGGAAAAGTACCAGGAACTTCTTACCGAAGAAAAAGTTACATTCATGCAGCGTCACGATGACTTTTTACAGCAATATCAGAATATGACATGCAACTGCTGCCTCCGAACACATGCCACGTATAAGAACTTTATGGCTCACATGCGAAAGAAGTATCACTTGCTACCGCGCAATCTCTGTTTTAAATGTCTGAAGCAAAATGATTCCAAGGCACTGTTCATATCGCATCTAAAGAAACGAAACTGTATTAACCTGTACAAGATCTACCACAGCCTGATCGATGCAGGCGTATTGAAGAAGGATGCGGCAGCCTGCTCGCCAGATAAGCTACGTGCTAAAGAGCTGCTGGTGAATAAAATTTACGAGTGCAAGATTTGCTCGAAGCACTTCCGCTTGAAGTTAGAGTTCCGTAGTCACGTCTACGAAGAACATGCGGATTATCAGAAGAAAGATGTGTCGCCAGGACACTGCGGATTTTGTGGGCTAGAGATTGAAGATCCTTTCGAGAGGAAACGGCACTACAACAACATGGACTGCATTGTTATACTGCGATGCATTACATGCGAAGAGAAGTTTGATAATCACCAGAAATTCTTGGATCATGTGTACTCCAAGCATTTAGCAAATAACAACGAAGTCCAGAAGAGCAATCTGATGAAGGAGCTGGCGGCCACAACTACGTCTACAGACAGCTCGCCATCGAAAAAGTCAGAAACGCCGTCGAAGCCGCAATTCTTTTCGCGTCTACCTCAAAGCTGCAATATTTGCGGTCAGCATTACAACAACTATAACAATGTTCTGCGCCACATGGAGTCCAAGCATCCGGATCAACTGCCGCAGACGTACAAGTGTACCCGGTGTCTGGTGGGCTATCCGCGCTTGATGAACCTCCGTGAGCACATGATCGAGGTACATGGCATGAAGGTGGACAAGGTGCGCAACAACAGCTTTGAATATATTGTAGATTCGCCTACCGTACAGGGAAGTGCACTACGACCCGGGGAGAAGCTTACAGCCGATGCCTACACTGGGCGGTATGATTACGTGATGAAAGACTTGATGTCCATAACCAATGGTGGCACTGCAGGAACTGAGGTCCCAAATGAAAACGAAGACGATGGCGATCAGTCCGATTCGCCCATTCCAAAGAAACTTAAGCTAGAGACCGGCACGATGGTTGCGGTTGGTACCGCAAATCTAAAAGAATGTCCCATATGTAGTGCAGTTTTCAACAACAATATTGGTCTCTCCAATCACATGCGTACTCATACAACTACAGAAACTGCCAGCGGCGGAGGTACTGCCGCCGGCAATGTTACTGTCGCTATAGGAGCGGAACAACTACCTGATGAGGACGAGGAGGTGGCCGAAAAGAAGCCAATAGATCCGCTATTTAAGAGAAGTCTAGAGTTGGCGGCCGATCGCCGATTCCGTCGCATGCGATGTCGCATTTGCCAGAAACGCTTTTCCTCGAAGAAGAGCTATCGCCGCCACATGCTGGTCGATCATCAAATTCGGAATGTGCAGTTCATTAAGTGCAAGCTCTGCAACGCCGAATTCGCATACGAGAAAGGGCTCAAAGTGCACATGTTCAAGATACACAATACGCTGTTGAAGGACGAAATGATCGTAAAACAATACGAGTGCGATATATGTTCGATTGTATACAGGACCGAGGAACAGCTGCTGATGCATAAGAAGTCGGTCCATGGCAATGAGAGTGCACAGGCCGACGATGAGCTCCCACCATCGACCGAACAGACAATGGAATCATCAGCGCCGCTTTACTGGTACCAGTGCCGCTATTGCCCGTCCAACTTCAACACAAACAAGAAGCTGGCTATTCACATAAACTCCCACTACGAGTTCGACTCAAACGACTACTCCTGTAAGGACTGTGGCAACGTGTACAGCGGACGCAAGAGTCTCTGGGTGCATCGCTACAAGAAGCACCCTCCGGTGGCTGATCCTTCGGAGTGTTTGCTTTGCAAGAAGATCTTTTTCGATAAGCAAATGCTGGATAATCATGTCCAGTCTTGTGCCAAGAAGTCAAAGGCTGGCACATCTGAAACTGAGGTTTCCTCTTCTTTCTTCCAGCATAAAACTGGAGACGATGATGATGTCAATGATCACCGGCTGTCGGAGCAATCCGCCATTGGGGAGGGTGCGGCGAGTTTGAAGATTAAACTACCCGAGGTCGCGTGCACAATTTGTGCGCAAAAATTCACTGACCAGGACCTCTTTACCAAACACATCCAGATGCACGAGATGGAGTTATATACCGACAATCCGCTGGCCGCGATGTTCGACACCGGTCCCGCTGATCCCAATCAATTCTACTTGGATCGAGTCAACGACAATGGGGAGTATGTGTGCGATATCTGTACAAAGGCGTTCGCTCAAATGACTGCGCTGAAGGTCCACCGCAAGTGGCATTTTCGAGGTGATAGCAAACAGACTCCAGCCGATGCAAACGCGCCAAAGACCATGAAACGCAAGCGTGAACTTAAATGCGATTACTGTCCGTCAACATTCATCAGCTCCAACAACCTCCGACGTCACATAGCCGAGCTGCACAAATCTGAAATATCCAATTGGCCCGAACCGCCAAAAATCGATCCCGAAAAGTATCTTCAATGCGGCAAGTGCGATCTGAAGTTCGACAACAAGAAAGAGTGGATCGATCATAAAGTAAACGAAGCCAAGATTGCCAAACCGTTTGGACCTTTCCAGTGGGGCTGCGAGATCTGTGGTGTGTACTTGTCACGTCGTGAGAAGCTGATACATCACATGATGACACACATAAAGGAGTCCAACGGTCAGGTGAGTCAGGTCGAAGGTGATAATTATCCGGGTGAGAGTAACTCTCAGGACTCTGAGTCCTCGAGCCATCCAGAGGCATCTGAACAGAAAAGACCAGAAGAAGacgatgaggaagaagaggaagaggacgaggaagaagaagaggaaGAGGAACTCGAAGGTGACGAAGAAGAAGCCGAAGAAACAGTCGATACAGTCAACCACGATGATAATGCCAATGATGGACAAGATGACGACGATCAGCAATCACAACTAAGGCAACGACTGCAGCGTGAATCAAACGACGACAGCAATGACTCAAGTGACCAGAGCTCCGATTCGGATGATTCATCATCTGAAGAGGAAGAACCAGAAGCTCCCCAACCGCGTGACGACTTTAAAAAGCGATTTTCGTGCGATTTATGTCAGGTGTTCTTTGACACATCAACGGAACTTCAAAAACATGTCACTAGTCATTTCCTCAACGGACCAGGTTCAGTCACATTGACCACAATCACAAAGGACAAACACAAGCCCAAGCCCAAGCCATCAGCGAAAAACAACGACGATGACGataacgatgacgatgatgaagatgatgatgatgacgacgacgatatGACCGAAACGGACGTAGTGAACTCGTAA
- Protein Sequence
- MTEESILRARQNCCRLCLAPDSECISIFSSYAADKEPLATKIQSCVNIKVSPIDRLSLRICHACISYLNSWQSFKNRCVASQNKQRSWLEISKKFEKKQIGASIQLTAAPVGMSHDEIATGGGGDEHDTSPLATSILEGISSLKKRRSLTVYPIPVHIKDEPMDEEEYDPKHDESDIDPTLFLERTEEEGSDNLSQKEQHLASLGLKQATSSVNPINYLPQKMSENQRARKQMIVFSEEHQNFNEMFDNFATEEESKPLIVSPQEELSTTTAEQNSIVIDECKEFKIVHVQGTIDIGNAGSEQICEIETAANTIRITDMLASTQNGIASISERMHKFENRFDTFVAETNVKLDGILLKTCGEIYITADAQKTDLIQDFKFPLNEVGDVFHLNKKISSDTGFKSQLLAQLSSIGGKTRTVDGGKLIYKLIDHLFHPELMTDYSFDGDKIPPPSVDKSLEITPAINEVKEASCRACNLKFSTRANARRHERNLHPHLFTSISLSTIQPKGLNVVSPMQQGIKGAGQVIRAAIKPEQLGLYDYDQPEKYQELLTEEKVTFMQRHDDFLQQYQNMTCNCCLRTHATYKNFMAHMRKKYHLLPRNLCFKCLKQNDSKALFISHLKKRNCINLYKIYHSLIDAGVLKKDAAACSPDKLRAKELLVNKIYECKICSKHFRLKLEFRSHVYEEHADYQKKDVSPGHCGFCGLEIEDPFERKRHYNNMDCIVILRCITCEEKFDNHQKFLDHVYSKHLANNNEVQKSNLMKELAATTTSTDSSPSKKSETPSKPQFFSRLPQSCNICGQHYNNYNNVLRHMESKHPDQLPQTYKCTRCLVGYPRLMNLREHMIEVHGMKVDKVRNNSFEYIVDSPTVQGSALRPGEKLTADAYTGRYDYVMKDLMSITNGGTAGTEVPNENEDDGDQSDSPIPKKLKLETGTMVAVGTANLKECPICSAVFNNNIGLSNHMRTHTTTETASGGGTAAGNVTVAIGAEQLPDEDEEVAEKKPIDPLFKRSLELAADRRFRRMRCRICQKRFSSKKSYRRHMLVDHQIRNVQFIKCKLCNAEFAYEKGLKVHMFKIHNTLLKDEMIVKQYECDICSIVYRTEEQLLMHKKSVHGNESAQADDELPPSTEQTMESSAPLYWYQCRYCPSNFNTNKKLAIHINSHYEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPPVADPSECLLCKKIFFDKQMLDNHVQSCAKKSKAGTSETEVSSSFFQHKTGDDDDVNDHRLSEQSAIGEGAASLKIKLPEVACTICAQKFTDQDLFTKHIQMHEMELYTDNPLAAMFDTGPADPNQFYLDRVNDNGEYVCDICTKAFAQMTALKVHRKWHFRGDSKQTPADANAPKTMKRKRELKCDYCPSTFISSNNLRRHIAELHKSEISNWPEPPKIDPEKYLQCGKCDLKFDNKKEWIDHKVNEAKIAKPFGPFQWGCEICGVYLSRREKLIHHMMTHIKESNGQVSQVEGDNYPGESNSQDSESSSHPEASEQKRPEEDDEEEEEEDEEEEEEEELEGDEEEAEETVDTVNHDDNANDGQDDDDQQSQLRQRLQRESNDDSNDSSDQSSDSDDSSSEEEEPEAPQPRDDFKKRFSCDLCQVFFDTSTELQKHVTSHFLNGPGSVTLTTITKDKHKPKPKPSAKNNDDDDNDDDDEDDDDDDDDMTETDVVNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00312867; iTF_00316205; iTF_00311247; iTF_00314575; iTF_00315387; iTF_00312029;
- 90% Identity
- -
- 80% Identity
- -