Basic Information

Gene Symbol
hang
Assembly
GCA_955612985.1
Location
OY015313.1:41508260-41520035[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.046 5.4 8.4 1.3 3 23 252 273 251 273 0.93
2 17 0.018 2.2 9.7 2.7 1 23 444 467 444 467 0.91
3 17 0.0017 0.2 12.9 1.7 2 23 575 597 574 597 0.95
4 17 0.02 2.3 9.6 0.1 1 23 605 628 605 628 0.95
5 17 3.2e-05 0.0038 18.4 0.1 2 23 725 746 724 746 0.97
6 17 2.1e-05 0.0025 19.0 2.5 2 23 804 826 803 826 0.96
7 17 0.0048 0.56 11.5 0.3 2 23 835 857 834 857 0.95
8 17 0.00083 0.098 13.9 0.2 1 23 870 893 870 893 0.97
9 17 0.00036 0.042 15.1 1.0 1 23 921 943 921 943 0.99
10 17 0.0015 0.18 13.1 0.9 1 23 951 974 951 974 0.96
11 17 0.28 33 6.0 0.2 2 21 982 1001 981 1002 0.91
12 17 0.00014 0.017 16.3 0.5 3 23 1061 1081 1060 1081 0.98
13 17 6.9e-05 0.0081 17.3 0.2 1 23 1116 1138 1116 1138 0.98
14 17 7.2e-05 0.0084 17.3 0.2 2 23 1163 1185 1162 1185 0.93
15 17 0.088 10 7.6 0.2 2 19 1205 1222 1204 1224 0.93
16 17 0.0012 0.14 13.4 0.9 3 23 1240 1260 1240 1260 0.99
17 17 0.0013 0.15 13.3 0.8 1 23 1396 1418 1396 1418 0.97

Sequence Information

Coding Sequence
ATGACGGAAGAATCAATATTACGTGCACGTCAGAATTGCTGTCGCTTGTGCTTGGCTCCGGACAGTGAATGTATTTCGATTTTTAGCAGCTACGCGGCTGATAAGGAGCCCCTAGCTACCAAAATTCAATCATGTGTCAATATTAAGGTGTCCCCAATTGATCGGCTTTCGCTGCGAATATGCCATGCTTGCATCAGCTACTTGAATTCGTGGCAGAGTTTCAAGAATCGATGTGTTGCCTCACAGAACAAGCAACGCAGCTGGCTGGAGATATCGaagaaatttgaaaagaaacaAATCGGCGCTTCTATACAGCTCACTGCTGCACCAGTGGGAATATCCCATGAAGAAATTGCAACAGGAGGAGGAGGTGATGAACATGACACCAGTCCACTTGCCACATCGATTTTAGAAGGAATTTCATCGCTTAAGAAGCGTCGCTCTTTAACGGTCTACCCAATTCCGGTACACATTAAAGATGAACCAATGGATGAGGAGGAATACGATCCGAAACACGATGAGTCCGACATTGACCCTACACTTTTCTTGGAACGCACCGAAGAGGAAGGCTCGGACAATCTGTCACAGAAGGAACAACATTTGGCCTCTTTGGGCCTTAAACAAGCAACGAGCTCCGTCAACCCATTAAATTATTTGGCCGACTATAGCTTCGATGGAGATAAGGTTCCACCGCCTTCAGTCGACAAATCCCTTGAAATCACCCCAGCAATCAATGAAGTTAAAGAGGCATCATGTCGTGCCtgcaatttaaaattctccACAAGAGCAAACGCCCGCCGTCATGAGCGCAACCTTCATCCACATCTTTTTACAAGCATTTCGCTCAGCACAATTCAACCTAAGGGGCTCAATATCGTTTCACCCATGCAACAAGGTGTTAAAGGCGCTGGCCAAGTGATACGCGCCGCAATAAAACCCGAACAGCTGGGACTATATGACTATGATCAACCGGAGAAGTACCAGGAACTTCTTACCGAAGAAAAAGTTACATTCATGCAGCGTCACGATGACTTTTTGCAGCAATATCAGAATATGACATGCAACTGCTGCCTCCGAACACATGCCACATATAAGAACTTTATGGCTCACATGCGAAAGAAGTATCACTTGCTACCGCGCAATCTCTGTTTTAAATGTCTAAAGCAAAATGATTCAAAGGCACTGTTCATATCGCATCTAAAGAAACGAAACTGTATTAACCTGTACAAGATCTACCACAGCCTGATTGATGCAGGCGTATTGAAGAAGGATGCGGCAGCCTGTTCGCCAGATAAGCTACGTGCTAAAGAGCTGCTGGTAAATAAAATTTACGAGTGCAAGATTTGCTCTAAGCACTTCCGCTTAAAGTTGGAGTTCCGCAGTCACGTCTATGAGGAACATGCGGATTATCAGAAGAAAGATGTGTCGCCAGGTCATTGCGGATTTTGTGGGCTAGAGATTGAAGATCCTTTCGAGAGGAAGCGACACTACAACAACATGGACTGCATTGTTATACTACGATGCATTACATGCGAAGAGAAGTTCGATAATCACCAGAAATTCTTGGATCATGTGTACTCCAAGCATTTAGCAAATAACAACGAAGTCCAGAAGAGCAATCTGATGAAGGAGTTGGCGGCCACAACTACGTCTACAGACAGCTCGCCATCGAAAAAGTCAGAAACACCGGCGAAGCCGCAATTCTTTTCCCGTCTACCTCAAAGCTGCAACATTTGCGGCCagcattacaacaactataacaATGTTCTGCGTCACATGGAGTCCAAGCATCCAGATCAACTGCCGCAGACGTACAAGTGTACCCGGTGTCTGGTGGGCTATCCGCGCTTGATGAACCTCCGTGAGCACATGATCGAGGTACATGGCATGAAGGTGGACAAGGTGCGCAACAATAGCTTTGAATATATTGTAGATTCGCCTACGGTACAGGGAAGTGCACTACGACCCGGGGAGAAGCTCACAGCCGATGCCTACACTGGGCGGTATGATTACGTAATGAAAGACTTGATGTCCATAACCAACGGTGGCACTGCAGGAACTGAGGTCCCAAATGAAAACGAAGACGATGGCGATCAGTCGGATTCGCCCATTCCAAAGAAACTTAAGCTAGAGACCGGCACGATGGTTGCGGTTGGTACCGCAAACCTAAAAGAATGTCCCATATGTAGTGCAGTTTTCAACAACAATATTGGTCTCTCTAATCACATGCGTACTCATACAACTGCTGAAACTGCCAGCGGCGGAGGTACTGCCGTTAGCGTTGTTACTGTCGCTATAGGAGAGCAGCAACTACCTGATGAGGACGAGGAGGTGGCTGAAAAGAAGCCAATAGATCCGCTATTTAAGAGAAGTCTAGAGTTGGCGGCCGATCGCCGCTTCCGTCGCATGCGATGTCGCATTTGCCAGAAACGCTTTTCATCGAAGAAGAGCTATCGCCGCCACATGCTGGTCGATCATCAAATTCGGAATGTGCAGTTCATTAAGTGCAAGCTCTGCAACGCCGAATTCGCTTACGAGAAAGGGCTCAAAGTGCACATGTTCAAGATACACAATACGCTGTTGAAGGACGAAATGATCGTAAAACAATACGAGTGTGACATATGTTCGATTGTATACAGGACCGAGGAACAGCTGCTGATGCATAAGAAGTCGGTCCATGGCAATGAGAGTGCACAGGCCGACGATGAGCTCCCACAATCGACCGAGCAGACAATGGAATCATCAGCGCCGCTTTACTGGTACCAGTGCCGCTATTGCCCATCCAACTTCAACACAAACAAGAAGCTGGCTATTCACATAAACTCCCACTACGAGTTCGACTCAAACGACTACTCCTGCAAGGATTGTGGCAACGTGTACAGCGGACGCAAGAGTCTCTGGGTGCATCGCTACAAGAAGCACCCTCCGGTGGCTGATCCTTCGGAGTGTTTGCTCTGCAAGAAGATCTTTTTCGATAAGCAAATGCTGGATAATCATGCCCAGTCTTGTGCCAAGAAGTCAAAGGCTGGCACATCTGAAACTGAGGTTTCCTCTTCTTTCTTCCAGCATAAAACCGGAGACGATGATGATGTCAATGATCCGGTGATCATTGAGCTGTCGGAGCAGTCCGCCATTGGGGAGAGTGCGGCGAGTTTGAAGATTAAACTACCCGAGGTCGCGTGCACCATTTGTGCGCAAAAATTCACTGACCAGGACCTCTTTACCAAACACATCCAGATGCACGAGATGGAGTTATATACCGACAATCCGCTGGCCGCGATGTTCGACACCGGGCCCGCTGATCCCAATCAATTCTACTTGGATCGAGTCAACGACAATGGGGAGTATGTGTGCGATATCTGTACAAAGGCGTTCGCTCAAATGACTGCGCTGAAGGTCCACCGCAAGTGGCATTTTCGAGGTGATAGCAAACAGACTCCAGCCGATGCAAACGCGCCAAAGACCATGAAACGCAAGCGTGAACTTAAATGCGATTACTGTCCGTCAACATTCATCAGCTCCAACAACCTCCGACGTCACATAGCCGAGCTGCACAAATCTGAAATATCCAACTGGCCCGAACCGCCAAAAATCGATCCCGAAAAGTATCTGCAATGCGGCAAGTGCGATCTGAAGTTCGACAACAAGAAAGAGTGGATCGATCATAAGGTGAACGAAGCGAAGATTGCCAAACCGTTTGGACCTTTCCAGTGGGGCTGCGAGATCTGTGGTGTGTACTTGTCACGTCGTGAGAAGCTGATACATCACATGATGACACACATAAAGGAGTCCAACGGCCAGGTGAGTCAGGTCGAAGGTGATAATTATCCGGGTGAGAGTAACTCTCAGGACTCTGAGTCCTCGAGCCATCCAGAGGCATCTGAACAGAAAAGACCAGAAGAAGACGATGAGGAAGAAGAGGAAGaggacgaggaagaagaagaggaagagGAGCTCGAAGGTGACGAAGAAGCCGAAGAAACAGTCGATACAGTCAACCACGATGATAATGCCAATGACGGACAAGATGACGACGATCAGCAATCACAACTAAGGCAACGACTGCAGCGTGAATCAAACGACGACAGCAATGACTCTAGTGACCAGAGCTCCGATTCGGATGATTCATCATCTGAAGAGGAAGAACCAGAAGCTCCCCAATCTCGTGACGATTTTAAAAAGCGATTTTCGTGTGATTTATGTCAGGTTTTCTTTGACTCATCAACGGAACTCCAAAAACATGTCACTAGTCATTTCCTCAACGGACCCGGTTCAGTCACATTGACCACAATCACAAAGGACAAACACAAGCCCAAGCCCAAGCCATCAGCGAAAAacaacgacgatgacgatgacgatgatgaagatgatgatgatgacgacgatgatatGACCGAAACGGACGTAGTGAACTCGTAA
Protein Sequence
MTEESILRARQNCCRLCLAPDSECISIFSSYAADKEPLATKIQSCVNIKVSPIDRLSLRICHACISYLNSWQSFKNRCVASQNKQRSWLEISKKFEKKQIGASIQLTAAPVGISHEEIATGGGGDEHDTSPLATSILEGISSLKKRRSLTVYPIPVHIKDEPMDEEEYDPKHDESDIDPTLFLERTEEEGSDNLSQKEQHLASLGLKQATSSVNPLNYLADYSFDGDKVPPPSVDKSLEITPAINEVKEASCRACNLKFSTRANARRHERNLHPHLFTSISLSTIQPKGLNIVSPMQQGVKGAGQVIRAAIKPEQLGLYDYDQPEKYQELLTEEKVTFMQRHDDFLQQYQNMTCNCCLRTHATYKNFMAHMRKKYHLLPRNLCFKCLKQNDSKALFISHLKKRNCINLYKIYHSLIDAGVLKKDAAACSPDKLRAKELLVNKIYECKICSKHFRLKLEFRSHVYEEHADYQKKDVSPGHCGFCGLEIEDPFERKRHYNNMDCIVILRCITCEEKFDNHQKFLDHVYSKHLANNNEVQKSNLMKELAATTTSTDSSPSKKSETPAKPQFFSRLPQSCNICGQHYNNYNNVLRHMESKHPDQLPQTYKCTRCLVGYPRLMNLREHMIEVHGMKVDKVRNNSFEYIVDSPTVQGSALRPGEKLTADAYTGRYDYVMKDLMSITNGGTAGTEVPNENEDDGDQSDSPIPKKLKLETGTMVAVGTANLKECPICSAVFNNNIGLSNHMRTHTTAETASGGGTAVSVVTVAIGEQQLPDEDEEVAEKKPIDPLFKRSLELAADRRFRRMRCRICQKRFSSKKSYRRHMLVDHQIRNVQFIKCKLCNAEFAYEKGLKVHMFKIHNTLLKDEMIVKQYECDICSIVYRTEEQLLMHKKSVHGNESAQADDELPQSTEQTMESSAPLYWYQCRYCPSNFNTNKKLAIHINSHYEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPPVADPSECLLCKKIFFDKQMLDNHAQSCAKKSKAGTSETEVSSSFFQHKTGDDDDVNDPVIIELSEQSAIGESAASLKIKLPEVACTICAQKFTDQDLFTKHIQMHEMELYTDNPLAAMFDTGPADPNQFYLDRVNDNGEYVCDICTKAFAQMTALKVHRKWHFRGDSKQTPADANAPKTMKRKRELKCDYCPSTFISSNNLRRHIAELHKSEISNWPEPPKIDPEKYLQCGKCDLKFDNKKEWIDHKVNEAKIAKPFGPFQWGCEICGVYLSRREKLIHHMMTHIKESNGQVSQVEGDNYPGESNSQDSESSSHPEASEQKRPEEDDEEEEEEDEEEEEEEELEGDEEAEETVDTVNHDDNANDGQDDDDQQSQLRQRLQRESNDDSNDSSDQSSDSDDSSSEEEEPEAPQSRDDFKKRFSCDLCQVFFDSSTELQKHVTSHFLNGPGSVTLTTITKDKHKPKPKPSAKNNDDDDDDDEDDDDDDDDMTETDVVNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00313703;
90% Identity
iTF_00316205;
80% Identity
-