Basic Information

Insect: Cheilosia soror
Gene Symbol: -
Assembly: GCA_948107745.1
Location: OX443561.1:127887184-127905158[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 4.5e-05 0.0053 17.8 2.1 1 23 464 486 464 486 0.96

2 18 1.2e-05 0.0014 19.7 0.4 1 23 492 514 492 514 0.97

3 18 2.3e-05 0.0026 18.8 0.5 1 23 520 542 520 542 0.98

4 18 1.9e-05 0.0022 19.0 3.1 1 23 548 570 548 570 0.97

5 18 4.4e-05 0.0051 17.9 4.7 1 23 576 598 576 598 0.99

6 18 8e-05 0.0093 17.0 5.7 1 23 604 626 604 626 0.97

7 18 2.2e-07 2.6e-05 25.1 4.3 1 23 632 654 632 654 0.98

8 18 1.4e-07 1.6e-05 25.7 2.4 1 23 660 682 660 682 0.97

9 18 0.00019 0.022 15.9 5.7 1 23 688 710 688 710 0.97

10 18 2.3e-05 0.0027 18.7 6.5 1 23 716 738 716 738 0.98

11 18 4e-06 0.00046 21.1 4.5 1 23 744 766 744 766 0.98

12 18 9.2e-06 0.0011 20.0 8.1 1 23 772 794 772 794 0.98

13 18 2.2e-06 0.00026 21.9 7.9 1 23 800 822 800 822 0.98

14 18 8.4e-07 9.8e-05 23.3 7.7 1 23 828 850 828 850 0.98

15 18 0.00026 0.031 15.4 9.5 1 23 856 879 856 879 0.95

16 18 0.00022 0.026 15.7 0.5 1 23 885 907 885 907 0.97

17 18 0.00099 0.12 13.6 4.4 1 23 917 939 917 939 0.98

18 18 8.2e-06 0.00096 20.2 1.7 1 23 945 968 945 968 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	4.5e-05	0.0053	17.8	2.1	1	23	464	486	464	486	0.96
2	18	1.2e-05	0.0014	19.7	0.4	1	23	492	514	492	514	0.97
3	18	2.3e-05	0.0026	18.8	0.5	1	23	520	542	520	542	0.98
4	18	1.9e-05	0.0022	19.0	3.1	1	23	548	570	548	570	0.97
5	18	4.4e-05	0.0051	17.9	4.7	1	23	576	598	576	598	0.99
6	18	8e-05	0.0093	17.0	5.7	1	23	604	626	604	626	0.97
7	18	2.2e-07	2.6e-05	25.1	4.3	1	23	632	654	632	654	0.98
8	18	1.4e-07	1.6e-05	25.7	2.4	1	23	660	682	660	682	0.97
9	18	0.00019	0.022	15.9	5.7	1	23	688	710	688	710	0.97
10	18	2.3e-05	0.0027	18.7	6.5	1	23	716	738	716	738	0.98
11	18	4e-06	0.00046	21.1	4.5	1	23	744	766	744	766	0.98
12	18	9.2e-06	0.0011	20.0	8.1	1	23	772	794	772	794	0.98
13	18	2.2e-06	0.00026	21.9	7.9	1	23	800	822	800	822	0.98
14	18	8.4e-07	9.8e-05	23.3	7.7	1	23	828	850	828	850	0.98
15	18	0.00026	0.031	15.4	9.5	1	23	856	879	856	879	0.95
16	18	0.00022	0.026	15.7	0.5	1	23	885	907	885	907	0.97
17	18	0.00099	0.12	13.6	4.4	1	23	917	939	917	939	0.98
18	18	8.2e-06	0.00096	20.2	1.7	1	23	945	968	945	968	0.96

Sequence Information

Coding Sequence: ATGAATTCGGATCATACAACAGCTCCTGGCGAGTCGTCATCAAATCCGAATGACTCTCAACAAAGTCGGCATTCGCCGCAGCAGgcccagcaacaacaacaacagcagcagcagcatcatcagcaccaacaacaacaacaacagcagcaacaactcgCTCACCAGCGCCATCCGCAACAATTGAATGAACAACAtgtccagcaacagcaacatcaacatcacgAAAATCCTGGCATTGTCGGAGTTATTCAGCCTGTTGGCGGGATCGATTCGGATGTATCCAAACAACAGCACCAGTCGCAGCAGCAtcaactacaacaacaacaacaacagcaccaCCATCAGCCATCGCTTGTATCGGGTACCCCACATCTTGGAAAATATTGGGTTGTCACGAATCTATTCCAAGGTCCAGGTCAGCCGCCATACAATATTGGTGTAACGCCAACAACCTCAGCAGTTCCTACACTACCGCCTCCAATATCATCTCATTCAAGCGCCTCAGGACCAAAATCAGGAAACTCGAAACAACAGCAAGATCAACAATTAGCTCCAAACTCGCACACGCAATCGCCAGCACACATAGTCTCATCCGTTGGTGCAACATCTCTCCAAATACCCAATCCAATGATCACGAATGCCTCATTGAATCAGCAGCAGCTTCCGAATGGCACCATTATTGCCGGACCACGTCATCCGGATTCCCTACACGTCCATGGAACGATGTCCTCCGACGATAATCGACACGTCTCACACGGTATGCAAGACATAAAGGAGGAGAAACCTTTCATAAATGGCAAGCAAAACAATCACATGGCCCATGTCAATCCAGCATCTTCCGTTTCGTCGAAAATGAATTCTGGCAGTGGTGGCAACAATCAGCAATCAGCCGAACCAGGTGGCGGTGTACAAATGGTTAATAAACTGCAAGCGGGCGGTGAACAACAAGAGCTGGGCACCGGTAAGCCGCCGCACGGTGTGGAAATGTACAAAGTCAATATCGAAGATTTGAGTCAATTTCTATCATATCACGAGGTCTTTGGCAAGATCCATGGCGAAGTAATAAATCAACAACAAATATCATCGCACACGGTAACGCATCCTACTACAAATGTATCAACCTCAAATGCTGGTGGCAATACCTCTGTGAGTGGTACTGTTACCGGCTCACTACCTCCACCCCCGCCACCGTCGACAAATGGCAATTCGATAGTGACAACTAACAGCCTTACCAGTTCAGGAACTGGTGCACAAGCAACAGCGCCGCCGGGTACTGTCGCCACCGCGGCTGGCGATCTATTAATGCCCAAAATGGAGAATCAAGGGATGGGCGTCGATCAGAATACACCACTGTTGGCTCCCGACGGCACCCCCATAATGGGCGGTACGCATATCTGTGACATTTGTGGCAAAATGTTCCAATTTCGCTATCAACTAATTGTACATCGTCGCTACCACAGTGAACGTAAGCCATTCAATTGCCAAGTATGCGGACAGGGATTCACAACGTCGCAAGATCTCACCCGCCACGGCAAGATTCATATTGGTGGACCAATGTTCACGTGTGTAATCTGCTTCAATGTGTTTGCCAACAACGCCAGTCTGGAACGGCATATGAAACGTCACTCGACCGATAAGCCATTCGCGTGCACCATATGCCAGAAGACATTTGCCCGCAAAGAGCATTTGGACAACCATTTTCGCAGTCATACGGGCGAGACGCCATTCCGTTGTCAGTATTGTGCGAAAACGTTTACGCGAAAGGAACACATGGTGAATCATGTACGCAAGCATACCGGAGAGACGCCGCATCGTTGCGATATTTGTAAGAAATCTTTTACGCGGAAAGAGCACTATGTAAACCATTACATGTGGCATACAGGTCAGACGCCGCATCAATGTGACATTTGTGGGAAGAAGTATACCCGGAAGGAACATCTAGCCAATCATATGCGCTCCCATACGAACGATACACCATTCCGGTGCGAGATATGTGGCAAGAGTTTCAGCAGAAAGGAACACTTTACCAACCACATTTTATGGCATACAGGAGAAACCCCTCATCGCTGTGATTTCTGTGCGAAGACGTTTACCCGGAAGGAGCATCTCTTAAACCATGTTCGCCAACATACGGGTGAGTCACCACATCGCTGCACCTATTGCTTGAAGACCTTCACTCGTAAGGAACACCTAGTGAATCACATTCGTCAACACACAGGCGAAACCCCCTTCAAGTGCACCTACTGTACTAAGGCGTTTACTCGAAAGGATCACATGGTGAATCACATCCGTCAACATACTGGAGAGTCACCGCATAAATGCACCTATTGCACGAAAACCTTCACAAGGAAAGAACATCTGACCAACCATGTGCGCCAACATACGGGTGAGTCGCCTCATCGTTGCacctactgcaaaaaaacatttacacGCAAGGAACACCTAACGAATCACATCCGGTTGCATACAGGCGATTCGCCCCACAAATGCGAATACTGCCAAAAGACGTTTACACGCAAGGAACACTTGAACAATCACATGCGACAACACTCGAGTGACAATCCACATTGCTGTAATGTGTGCAACAAACCGTTCACACGCAAGGAACACTTGATCAATCATATGTCACGCTGTCATACCGGAGATCGGCCGTTTGCTTGTGAAACATGCGGAAAGAGTTTCCCACTAAAAGGTAACTTGCTCTTCCATCAGCGCAGTCACACCAAAGGACAAGAGTGTGAGCGTCCGTTTTCGTGCGAAAAATGCCCGAAGAACTTCATTTGCAAAGGTCATCTGGTGTCGCATATGCGTTCGCATTCAGGTGAAAAACCACATGCCTGCACTATGTGTAGTAAGGCATTTGTGGAAAGAGGGAACCTTAAGCGTCACATGAAGATGAATCATCCCGATGCAGTTATGCCACCGCCGCCGACACCAATTCCGGGTATTTTGACGCAAATCAAACAGGAAATCAACCCAATAATAATTCCTCATCAACCTCCAACCATGCACACGATACAGCAAATAACTTCAACTGCAGGCAGCTCAAGTAACGCAACTAATCCAGTAAATCCAGCCCTTCTGGCGCCCGGTCTTGTACCAATGGTAACATCCACAATTACTTCACACATTAATCAAAAGCAGCAATcccatcaacagcagcagcagcaacaccaacatcagcagcaattgcagcaacagcagcagcaacaacaacagctttTACAGCTCTCCATTCAGCAGGCTGCTCAACATCAGCAGGCTGAACATcgacagcaacaacaacagcaacagcagcaacaacagcagcaacaacaacagcagcaacagcatcaacagcagcaacaacagcagagtcatcaacaacaccaacaacaacaacagcagcagcaacagcaagctCAGCAACAATCACAACAGCAATCACAGCATCAACAGCCACAACCGCCATCAGTGCCGATAGCTCTCATTGGAGCCGATCCCTCAGCGATAGCACGCGCTGCAATGCAATTACAACATTTGCCAACCAACGTCGAACAACATCCAGTGGTGTACTAG
Protein Sequence: MNSDHTTAPGESSSNPNDSQQSRHSPQQAQQQQQQQQQHHQHQQQQQQQQQLAHQRHPQQLNEQHVQQQQHQHHENPGIVGVIQPVGGIDSDVSKQQHQSQQHQLQQQQQQHHHQPSLVSGTPHLGKYWVVTNLFQGPGQPPYNIGVTPTTSAVPTLPPPISSHSSASGPKSGNSKQQQDQQLAPNSHTQSPAHIVSSVGATSLQIPNPMITNASLNQQQLPNGTIIAGPRHPDSLHVHGTMSSDDNRHVSHGMQDIKEEKPFINGKQNNHMAHVNPASSVSSKMNSGSGGNNQQSAEPGGGVQMVNKLQAGGEQQELGTGKPPHGVEMYKVNIEDLSQFLSYHEVFGKIHGEVINQQQISSHTVTHPTTNVSTSNAGGNTSVSGTVTGSLPPPPPPSTNGNSIVTTNSLTSSGTGAQATAPPGTVATAAGDLLMPKMENQGMGVDQNTPLLAPDGTPIMGGTHICDICGKMFQFRYQLIVHRRYHSERKPFNCQVCGQGFTTSQDLTRHGKIHIGGPMFTCVICFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDICGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCAKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHIRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGESPHRCTYCKKTFTRKEHLTNHIRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQECERPFSCEKCPKNFICKGHLVSHMRSHSGEKPHACTMCSKAFVERGNLKRHMKMNHPDAVMPPPPTPIPGILTQIKQEINPIIIPHQPPTMHTIQQITSTAGSSSNATNPVNPALLAPGLVPMVTSTITSHINQKQQSHQQQQQQHQHQQQLQQQQQQQQQLLQLSIQQAAQHQQAEHRQQQQQQQQQQQQQQQQQQQHQQQQQQQSHQQHQQQQQQQQQQAQQQSQQQSQHQQPQPPSVPIALIGADPSAIARAAMQLQHLPTNVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00426545;
90% Identity: iTF_00315368;
80% Identity: -