Basic Information

Insect: Cheilosia soror
Gene Symbol: -
Assembly: GCA_948107745.1
Location: OX443564.1:50006711-50022240[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.8e-10 1e-07 32.2 0.0 1 38 476 514 476 519 0.89

2 4 5.6e-13 3.3e-10 40.2 0.1 2 39 531 568 530 571 0.94

3 4 1.7e-17 1e-14 54.6 0.0 1 45 585 630 585 630 0.98

4 4 8e-19 4.7e-16 58.9 0.0 1 42 637 679 637 682 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.8e-10	1e-07	32.2	0.0	1	38	476	514	476	519	0.89
2	4	5.6e-13	3.3e-10	40.2	0.1	2	39	531	568	530	571	0.94
3	4	1.7e-17	1e-14	54.6	0.0	1	45	585	630	585	630	0.98
4	4	8e-19	4.7e-16	58.9	0.0	1	42	637	679	637	682	0.96

Sequence Information

Coding Sequence: ATGGTTACACAGTACCTGAAACTGAGCACTGGACAATTTTCTGTTGGGTGGAGGAACCGCATTGATTGTGTTAGGGCCATTCTGAAGGGAGGTCTTCTGCGGACAGCCGAGCAATTGAAAATCAAAGGGCTTTGCGAAACAGCCGAAAGTGTTGATGATATCTCAGAGGCAGCCACAGCGACCATCACTGTTTCAGAAAATATAACACAGGCGGTTGTTGGTAATATAGTGAATGCAACACAGGTTGCACCAACAACGGCCACATCCACGCCCCAGCTACGAAAATCTCGGGTCAGAAAACGCTCAAAGTCGCCGGATACAAAtctgcaacagcagcagcaacatcaacaacaacaacagcagcagcaccaacaacaacaacaacagcaacatcaacagcaacagcacCATCAACAAGCAATATTAAGTCAAAGTCTTAACACAGCGGCAATAGTTAGCCTGCAACAGACGTCATCGGGTAACTACATACCCGTCTCTGGTGGTCAGACGATAACAACGACTGCTGTTAACCAACATAACTCCGAGGAATCAGATTCTGATAAGCCAACATCGCAGAAAATTTGCAAAACCGAAGCCGCCAACTCACCGACATCGAATAATGGCAGTGTAACTGTCGCACAGGGAGCAGCAATTGTAACACAAATTGTAGTAGCACGCGACGGAAAAGATAAAAACATGACCAGTCTAGGAATGGGAATGaacggcGGTCTCCTCGGAGTACCAATGGGCTTCTTAGATTTTGCACCTGAACCACCAGCACCATCAGCCACGCCTGTAACCGTGACGGAGCATGTCGACTTATCCTGCAATCCCAGTACAGATACCCGAGATTTATCAAATCCCACCGAAGCGCTCGATATTGACAATCATTTAGCACAACATATGATCCAACGACTTGATCAATCGCCCATGCATACGATTCACCATCAGTCGTCTACTGGCGATGAGAGTAACTCCAATCTTATTCAGCATATTAAGAGTGAAGTGATTGAAGTGAAACAGCATCATCACCAACAGCAGCAGTTGCATGCGCAAGCTTTATCCCAACAAGGACAAtctcaacaacagcagcagcagcaacagcatcaacagcagcagcaacaacagcaacaccaacagcagcaacaacaacaacaacaacagcagcatcaACAACATCAAGACATTTCCGGTGCAACTGTCATGGAAATTGACACGAGCAACATCAAGCATGAGCCGGGCATGATCATCACACCGGAAATTGTTACAATGATGGCAACTGGTCATATGGATATATACTCAGATGCCAGCGAGGATTCATTGATGATAGCGAATGGTTCCCCAAATGACAATAATGAGCCACACTATACAAATTTGGACCAACCACATGATAAACAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTGAAGAATCAAAACATGAGTTTGACGAAAGCCTCTGTGACGTATGGTATCCCATCGACAACATTGTGGCAACGTGCCCATCGCATGGGCATTGAAACACCCAAAAAGGAGGGCGGAACCAAATCATGGAACGAAGATTCATTAAACAGCGCTTTGGAGGCTCTGCGAACTGGCCAGATATCAGCAAATAAAGCCTCGAAGGCGTATGGTATTCCGTCCTCGACACTGTACAAAATTGCACGGCGCGAGGGTATACGACTGGCGGCACCATTCAATGCGGCGCCTACAACATGGACGCCTGAGGATTTAGAGCGTGCTTTGGAGGCCATTCGTGCTGGTCATACGTCCGTCCAAAAGGCCAGTTCTGAATTTGGTATACCAACAGGCACACTTTATGGCCGCTGTAAGCGTGAGGGTATTGAATTATCGCGCTCCAATCCGACACCATGGTCGGAGGATGCTATGAATGAGGCGTTGAATTCGGTTAGAGTCGGACAGATGTCCATCAATCAAGCGGCTATTCACTACAACCTTCCCTATAGTTCCCTGTATGGTCGCTTTAAGCGCGGTAAATACGACATTGCCAATACGAGTGCATCTTCTATTAACAACACATCGGGCAACACAAGTGGTAGCATTGAAATAATCGAGCATAGTCCAGAGAATTCGTTACACATGTTTCAGCAACAATTCCAATACAGTCCAGCGCCGCAGTCTAATCATCAaacccaacaacaacaacagcaacagcagcagcaacaacaacaacagcagcaacagcaacaacaacagcagcagcatcaacaacaccaacagcaaCCCCAACACATCCATCAACATGTTGTACACATTCAACAGCAAACCCCacaacaacatcatcatcaacagcaaCATATCCAACAGCAGGATGTTGTTACCTCAACAAGTCAGGTTCACACCCAAGCTGGACAAATCCAACAGATCTATCATCATCACAGCACCCCCGAGAGGAGTTGa
Protein Sequence: MVTQYLKLSTGQFSVGWRNRIDCVRAILKGGLLRTAEQLKIKGLCETAESVDDISEAATATITVSENITQAVVGNIVNATQVAPTTATSTPQLRKSRVRKRSKSPDTNLQQQQQHQQQQQQQHQQQQQQQHQQQQHHQQAILSQSLNTAAIVSLQQTSSGNYIPVSGGQTITTTAVNQHNSEESDSDKPTSQKICKTEAANSPTSNNGSVTVAQGAAIVTQIVVARDGKDKNMTSLGMGMNGGLLGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEALDIDNHLAQHMIQRLDQSPMHTIHHQSSTGDESNSNLIQHIKSEVIEVKQHHHQQQQLHAQALSQQGQSQQQQQQQQHQQQQQQQQHQQQQQQQQQQQHQQHQDISGATVMEIDTSNIKHEPGMIITPEIVTMMATGHMDIYSDASEDSLMIANGSPNDNNEPHYTNLDQPHDKQGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNSALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASSEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDIANTSASSINNTSGNTSGSIEIIEHSPENSLHMFQQQFQYSPAPQSNHQTQQQQQQQQQQQQQQQQQQQQQQQHQQHQQQPQHIHQHVVHIQQQTPQQHHHQQQHIQQQDVVTSTSQVHTQAGQIQQIYHHHSTPERS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00314183;
90% Identity: iTF_00311726;
80% Identity: -