Basic Information

Insect: Cheilosia pagana
Gene Symbol: -
Assembly: GCA_936435595.1
Location: CAKZFE010000023.1:4110145-4119560[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.014 1.2 9.9 3.4 1 23 193 215 193 215 0.97

2 29 0.0002 0.018 15.7 1.9 3 23 224 244 222 244 0.98

3 29 8.3 7.5e+02 1.2 0.0 2 23 273 295 272 295 0.80

4 29 0.00058 0.052 14.3 5.3 1 23 366 389 366 389 0.95

5 29 0.00071 0.064 14.0 0.5 1 23 396 418 396 418 0.98

6 29 0.22 20 6.1 0.8 2 20 427 445 426 447 0.93

7 29 0.00094 0.084 13.6 0.3 2 23 459 480 458 480 0.97

8 29 0.00013 0.012 16.3 2.0 1 23 487 509 487 509 0.98

9 29 8.4 7.6e+02 1.2 0.7 1 23 522 544 522 544 0.87

10 29 0.019 1.7 9.5 0.1 1 23 619 642 619 642 0.96

11 29 2.8 2.5e+02 2.7 1.4 1 17 681 697 681 701 0.78

12 29 0.009 0.81 10.5 3.4 2 23 713 734 712 734 0.97

13 29 1.1e-06 9.9e-05 22.8 1.1 1 23 741 763 741 763 0.98

14 29 0.0069 0.62 10.9 4.5 1 23 901 924 901 924 0.97

15 29 3.1 2.8e+02 2.5 0.0 2 20 932 950 931 952 0.80

16 29 0.00034 0.031 15.0 1.4 1 23 961 984 961 984 0.97

17 29 0.013 1.1 10.1 1.5 1 23 994 1016 994 1016 0.98

18 29 4.7e-05 0.0042 17.7 1.0 1 23 1023 1045 1023 1045 0.98

19 29 0.00097 0.087 13.6 0.9 2 23 1069 1091 1069 1091 0.96

20 29 4.8e-05 0.0043 17.7 1.2 1 23 1131 1154 1131 1154 0.95

21 29 0.14 13 6.7 3.5 1 22 1161 1182 1161 1182 0.96

22 29 2.2 2e+02 3.0 1.8 1 23 1191 1214 1191 1214 0.87

23 29 0.014 1.3 9.9 0.8 1 19 1220 1238 1220 1240 0.94

24 29 0.00015 0.013 16.1 1.4 1 23 1250 1273 1250 1273 0.95

25 29 8.9e-06 0.0008 20.0 0.3 2 23 1293 1314 1292 1314 0.95

26 29 0.00049 0.044 14.5 4.3 1 23 1320 1342 1320 1342 0.99

27 29 7.1e-07 6.4e-05 23.4 3.2 1 23 1348 1370 1348 1370 0.98

28 29 7e-07 6.3e-05 23.4 2.5 1 23 1376 1398 1376 1398 0.99

29 29 0.00047 0.042 14.6 0.2 1 23 1404 1428 1404 1428 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.014	1.2	9.9	3.4	1	23	193	215	193	215	0.97
2	29	0.0002	0.018	15.7	1.9	3	23	224	244	222	244	0.98
3	29	8.3	7.5e+02	1.2	0.0	2	23	273	295	272	295	0.80
4	29	0.00058	0.052	14.3	5.3	1	23	366	389	366	389	0.95
5	29	0.00071	0.064	14.0	0.5	1	23	396	418	396	418	0.98
6	29	0.22	20	6.1	0.8	2	20	427	445	426	447	0.93
7	29	0.00094	0.084	13.6	0.3	2	23	459	480	458	480	0.97
8	29	0.00013	0.012	16.3	2.0	1	23	487	509	487	509	0.98
9	29	8.4	7.6e+02	1.2	0.7	1	23	522	544	522	544	0.87
10	29	0.019	1.7	9.5	0.1	1	23	619	642	619	642	0.96
11	29	2.8	2.5e+02	2.7	1.4	1	17	681	697	681	701	0.78
12	29	0.009	0.81	10.5	3.4	2	23	713	734	712	734	0.97
13	29	1.1e-06	9.9e-05	22.8	1.1	1	23	741	763	741	763	0.98
14	29	0.0069	0.62	10.9	4.5	1	23	901	924	901	924	0.97
15	29	3.1	2.8e+02	2.5	0.0	2	20	932	950	931	952	0.80
16	29	0.00034	0.031	15.0	1.4	1	23	961	984	961	984	0.97
17	29	0.013	1.1	10.1	1.5	1	23	994	1016	994	1016	0.98
18	29	4.7e-05	0.0042	17.7	1.0	1	23	1023	1045	1023	1045	0.98
19	29	0.00097	0.087	13.6	0.9	2	23	1069	1091	1069	1091	0.96
20	29	4.8e-05	0.0043	17.7	1.2	1	23	1131	1154	1131	1154	0.95
21	29	0.14	13	6.7	3.5	1	22	1161	1182	1161	1182	0.96
22	29	2.2	2e+02	3.0	1.8	1	23	1191	1214	1191	1214	0.87
23	29	0.014	1.3	9.9	0.8	1	19	1220	1238	1220	1240	0.94
24	29	0.00015	0.013	16.1	1.4	1	23	1250	1273	1250	1273	0.95
25	29	8.9e-06	0.0008	20.0	0.3	2	23	1293	1314	1292	1314	0.95
26	29	0.00049	0.044	14.5	4.3	1	23	1320	1342	1320	1342	0.99
27	29	7.1e-07	6.4e-05	23.4	3.2	1	23	1348	1370	1348	1370	0.98
28	29	7e-07	6.3e-05	23.4	2.5	1	23	1376	1398	1376	1398	0.99
29	29	0.00047	0.042	14.6	0.2	1	23	1404	1428	1404	1428	0.92

Sequence Information

Coding Sequence: ATGCTTATTGAATGGATAGAGAAGCATCCCTCTATGGCCAAAAGCACTGTGGAAAAAAGCCAGGCAAGACAAAAGACAATGAAAAGATGGAAATTTTTGACGAAGTTGCTAAACGAAAATGGTCCGCCCGAGAAAGATATTGTCGCATGGAAAAAGacaTGGGCTGACTACAAACACAGGGCGAAATCGAAATTGACAAAAATCAGAATGTCCTTAAAGAAAACCGGAAGTGCACCACATAAAAAACTGCAGCTAACATCGTTCGAAAGAAGAGTTATGAATCTGATGGGGATCAAAACCACTGCAGGCATGAAAAACGTCAACAAATTTGGCACTGAGTGCAAAGTGGAAGCGTCCACTGAACCTCCGATTCCGTCCACATCACAACAACATCCAACTGACACCAATCGAGATCGAGATGACGAAGTTAAAGATTTGTTGCTGGgtcttttgaataaaaatgagTGCACCGATGGCTATGGTAAAGCAACAGCAAAGAAACCAAAAACCCGAGGTAAACGATCAAGCGTCAGGACCCAAAATCGAACAAAGAGCGTTAAAACCGTTTCCAATCGTTTCGAATGCGATTCGTGCAACAAAACGTTCGCTTGGAAAAAGGATTTGTTTCGCCATGAAAAACATCATGATCCGAATAATAGAAAGTTCGGCTGTCCGCACTGTAGCCGTCGATTCATTCGAAAGGACAAACTGTCATCGCATTTGCTCGTACATTTGGCGGGTGTTCCCAAACGCCCCTTAAAGAGTGCCCAATACTTTGCGCATCATTTGTTTTCGGATAGACGGTTCAAAGAGATTAAATGCATGATTTGCAACTTCGAAGCTGCGTCAGACGTGCCAGAGCTTCGTCGCCACATTATCTTACACAATAACTTGGAACTGATTGAGGGTTTGGCAAAGAGCGAAGTAGTTAAAACCTTCTACCCGGAGAAAGAGCTGCAcgaagtcattccactgatcaCTGCGCAAATCGCCAACAAAGAGTTGAACAAACTCTATTCGATTGTCAATTCGCACAGCTATGAGATGGGCATAAGCGATTCGGATCAAAGCGATCCTGATGCCAAAGAGCCCAAATACACATGTGAAGTGTGCAGCAAACACTTCAATCGAAAGCACAAGCTTATGACACACCAGGCGTACGAGCACACCTTCGATGAGTGCCCGTACAACTGTGAGGGATGCAATCTGAAATTCACCAGCAAACCTGTGCTGGAGAGTCACTTGAAGTATCACTGCAAGAATCCAGACAAGATGCTGCAGTGCAAGAAGTGCCCCGGTCGCTTCTCCTGGCCGAAGAACTTGGAAAGCCACAGATGTGGCGGTAAGAAGATTGTGTTAGATAAAGAGTGCACCACGTGCGAAGTGTGTAACAAAGTTTTCGCATGGCCCAGGGATCTGAGAATACACAAAAAGACTCACATTCCAGATGGCAAGGCTCATAAATGTTCTGTGTGCGGTGAGAGATTTCTGCGGGCCCAGAATCTGCGCGACCATTTGCGAAAGCATTCGGCAAATGTCTTCGCCACCTTAAAACCGAAGAAATTCATGTGCTCGCTCTGCAATTTGGAGTTCTTGAGCCTTCCCAGCCTGAAATTCCATTTATACACGCACGCCGATGGCCAGACGGACATCAACTTTGATGCTTGTGAGTTTATAACGAATTTCTATTCTGATCCGGATGCGGACAGAGCGACGATTTCACAGTACATTCGAAACTGTTTCAATGAGCAAAAACTTTGCCAAATGTATACAGCGGTGAACAAGTTCGGCCTTGAGATGGTCTTGAGTGACTCTGACTCGGCCAACGAGAACGAAGCCAAAGATCAGGATCCCTATGTCTGCGAGCTGTGTGATGTAAAGTTCGCTCGTATGCAGGACATCCTTCAGCATCAGCTTGTCGAGCACGACTCAAAGGCGGCAAGTTTCCCGCACAAATGCGAAAAGTGCGGCGATCAGTTTGTTTGCGCGGCCATCCTTGCGCGTCACACGAAAAGTGAGTGCCAAAACTTGGACAGAGTGCACGAGTGCAAGAAATGCGGCGCAAAGTTCATGTGGAAACAAAATTTAGCCGGCCACAACTGTGCGCGTGACGGAGTGAACGGCGACAATGATAAAACATGCGAAACGTGTGGCAAGAAATTCGCTTGGTTGAAGGATCTGCACCGGCACAAGCGCAGCCACATACCGACTGAGGAGAAATTCGAGTGTCTAATATGCGATCGGAAGTTCAATCGGAAGGACAACATGCGAGTGCACATgaaaatccatgcgatagactACAAGTCGCCGAAGACGAAAGCGACATTGAAATGGGAGCAGCAGGACGAGAACTTGTGCAAGCCTCATGGTGTGAAGGAAATCCAGTGCAAGATCTGTTTGTCGAAGCACAACTCCATTCGCGACTTGTCAAATCATTTGGCGACGCACACGGATCAGGAGACACTCAAACACAGACAGGCGGAGATCGGCGATATCACCATGATGCTGTACAACAAGCAAATGAGCCTGTCGGCGCTGTCAAAGCGAATCGGTAAAGATCTTGCGAATGGCAGTCATACCCGGTTTTATTCCATCACAAACGAGTCGGGCTATGAGTTGAGTCTAATCGATTCGGAAACCAGTTCGGACCTAGAGGCCGAAGGCTATGATGACGCCGATGACGATGAGGTGCCCAAGGGCTACAACTGTTTGCTGTGCAAAAAGAACTTCAACAGAAAGTTTAAGATGTACAACCACCAGAAGACCGATCATTTGTGGGATGAGCTGCCGCTCGAGTGTACGTCTTGTGGACTGAGGTTCGCCAGCGAGGGCATCTATTCGGCCCACCTGAAGAACGAGTGCAGTAATACCGAGAAGCAGTTCAAATGCAAGCAGTGCCCCATGAAGTTCACCTGGAAGGAGAATCTAAAGAATCACGAAAGGGTTATGCACGACAAGAATCCAGCAGTGGCAAGGAAGTATCCTTGCAATTTCTGCGACAGGAGTTTCCTTTGGCAGAAGGACTTGCTGAGGCATCGAAAGACACACGGCACCCTTGACAGGTCATTCGAGTGCACATGGTGTTTCAGGGTGTTTCTGCGAAAGGACAATCTCAAGATTCATATGAAAGTGCACAAGAACGCCACACATCTACAACTACCCGACATCTACTATCTCGCTCGACCGAATGGTCACAAAAAGGCCGAGTGTAAGCTCTGCGACGAAAAGTACTCCACTGTGCATGAACTGCTGGCGCACATGCAAAATACACACGCGCACGAGATGGATGCAACCATTCCCAATGTCGCCAGTTACTCGATTACAAACGCACTTGGCTACGAGATGGACATCGAGGACTCTGAAACCGAGCACGAGGTAGAAAGCGAAAAGTACTCTTGTGAAATTTGTGACACCCGATTCAGCCGTCGCTTCAAACTCTTGCAACACCAACAGGCTCTTCACTATTCCGACAACATACCACACAAGTGCACCTTTTGCCCATTCAAATGCGTCTCGAAGGAAGTGCTCAACTATCACATGCGATCGCAATGCCTGAGCTCGTCGAAACAATTCCGCTGCACCCGTTGTACAATGCGGTTTATGTGGAAAGAGAATCTGGATCACCACGAAAGCCTGATCCACGATAGTGCTCGAACGCACAACTGCGATGTCTGCAAGAGGGATTTCGCCACACTGCACGACCTCAACAGCCACGAGGAATGCAAGCCACCAGGCGATGTTCAATATTTCGAATGCGACATTTGCAACCGAAAGTACAACCGCAAAGATCGACTCATAAGGCATGTAAAGGATAAGCATACAGACGCCAAGATCAAACAACGTGTCAAGAGTGCACAGCCGGTCGATAAGAAGTTCTTGTGCGCCTTCTGTGGCAAGGAAGTTTCGAGTTCATCGAATCTGATTATACATATGCGCCGACATACGGGCGAGAAGCCCTTTAAGTGTGAGTTTTGTAATAAGGGCTTTCCGCGGTCATCCGATTTGAGTTGCCATAGGCGGACACACACTGGCGAACGGCCACACAAGTGTTCGGTGTGCGAAAAGGCTTTCTCGCGTTCGTATAAGCTGCAAACTCACATGCGGATTCATTCGGGCGAACGGCCCTACAAGTGTACATACTGCGAGAAGACGTTCACGCAGTCCAATGATTTGACGCTACATGTGCGCAGGCATACGGGCGAACGACCGTACATATGCGAGACATGCGGCGAAAGGTTTATACAGGGAACCGCACTCCGCAATCACCGAAGGATGCGCGGACACTACGAAATGTAA
Protein Sequence: MLIEWIEKHPSMAKSTVEKSQARQKTMKRWKFLTKLLNENGPPEKDIVAWKKTWADYKHRAKSKLTKIRMSLKKTGSAPHKKLQLTSFERRVMNLMGIKTTAGMKNVNKFGTECKVEASTEPPIPSTSQQHPTDTNRDRDDEVKDLLLGLLNKNECTDGYGKATAKKPKTRGKRSSVRTQNRTKSVKTVSNRFECDSCNKTFAWKKDLFRHEKHHDPNNRKFGCPHCSRRFIRKDKLSSHLLVHLAGVPKRPLKSAQYFAHHLFSDRRFKEIKCMICNFEAASDVPELRRHIILHNNLELIEGLAKSEVVKTFYPEKELHEVIPLITAQIANKELNKLYSIVNSHSYEMGISDSDQSDPDAKEPKYTCEVCSKHFNRKHKLMTHQAYEHTFDECPYNCEGCNLKFTSKPVLESHLKYHCKNPDKMLQCKKCPGRFSWPKNLESHRCGGKKIVLDKECTTCEVCNKVFAWPRDLRIHKKTHIPDGKAHKCSVCGERFLRAQNLRDHLRKHSANVFATLKPKKFMCSLCNLEFLSLPSLKFHLYTHADGQTDINFDACEFITNFYSDPDADRATISQYIRNCFNEQKLCQMYTAVNKFGLEMVLSDSDSANENEAKDQDPYVCELCDVKFARMQDILQHQLVEHDSKAASFPHKCEKCGDQFVCAAILARHTKSECQNLDRVHECKKCGAKFMWKQNLAGHNCARDGVNGDNDKTCETCGKKFAWLKDLHRHKRSHIPTEEKFECLICDRKFNRKDNMRVHMKIHAIDYKSPKTKATLKWEQQDENLCKPHGVKEIQCKICLSKHNSIRDLSNHLATHTDQETLKHRQAEIGDITMMLYNKQMSLSALSKRIGKDLANGSHTRFYSITNESGYELSLIDSETSSDLEAEGYDDADDDEVPKGYNCLLCKKNFNRKFKMYNHQKTDHLWDELPLECTSCGLRFASEGIYSAHLKNECSNTEKQFKCKQCPMKFTWKENLKNHERVMHDKNPAVARKYPCNFCDRSFLWQKDLLRHRKTHGTLDRSFECTWCFRVFLRKDNLKIHMKVHKNATHLQLPDIYYLARPNGHKKAECKLCDEKYSTVHELLAHMQNTHAHEMDATIPNVASYSITNALGYEMDIEDSETEHEVESEKYSCEICDTRFSRRFKLLQHQQALHYSDNIPHKCTFCPFKCVSKEVLNYHMRSQCLSSSKQFRCTRCTMRFMWKENLDHHESLIHDSARTHNCDVCKRDFATLHDLNSHEECKPPGDVQYFECDICNRKYNRKDRLIRHVKDKHTDAKIKQRVKSAQPVDKKFLCAFCGKEVSSSSNLIIHMRRHTGEKPFKCEFCNKGFPRSSDLSCHRRTHTGERPHKCSVCEKAFSRSYKLQTHMRIHSGERPYKCTYCEKTFTQSNDLTLHVRRHTGERPYICETCGERFIQGTALRNHRRMRGHYEM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00313678; iTF_00311221; iTF_00316187; iTF_00311229;
90% Identity: iTF_00311229;
80% Identity: -