Cgro001137.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cheilosia grossa
Gene Symbol
-
Assembly
GCA_963082955.1
Location
OY720144.1:19121561-19126208[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 0.013 1.3 10.0 3.4 1 23 81 103 81 103 0.97
2 28 0.00018 0.018 15.8 1.9 3 23 112 132 110 132 0.98
3 28 7.6 7.5e+02 1.3 0.0 2 23 161 183 160 183 0.80
4 28 0.00021 0.021 15.6 3.3 1 23 254 277 254 277 0.95
5 28 0.0011 0.11 13.4 0.5 1 23 284 306 284 306 0.98
6 28 3.5 3.5e+02 2.4 1.0 2 20 315 333 314 335 0.88
7 28 0.00086 0.085 13.7 0.3 2 23 347 368 346 368 0.97
8 28 0.00081 0.079 13.8 1.8 1 23 375 397 375 397 0.98
9 28 0.0062 0.61 11.0 0.1 1 23 507 530 507 530 0.96
10 28 2.6 2.5e+02 2.8 1.4 1 17 569 585 569 589 0.78
11 28 0.0083 0.81 10.6 3.4 2 23 601 622 600 622 0.97
12 28 6.1e-07 6e-05 23.6 1.0 1 23 629 651 629 651 0.98
13 28 0.021 2 9.4 4.0 1 23 789 812 789 812 0.96
14 28 3.4 3.4e+02 2.4 0.1 2 12 820 830 819 840 0.78
15 28 0.00032 0.031 15.1 1.4 1 23 849 872 849 872 0.97
16 28 0.1 10 7.2 2.9 1 23 882 904 882 904 0.97
17 28 4.3e-05 0.0042 17.8 1.0 1 23 911 933 911 933 0.98
18 28 0.00068 0.067 14.0 1.1 2 23 957 979 957 979 0.96
19 28 0.0016 0.16 12.9 2.5 1 23 1019 1042 1019 1042 0.95
20 28 0.23 23 6.1 3.4 1 22 1049 1070 1049 1070 0.96
21 28 2 2e+02 3.1 1.8 1 23 1079 1102 1079 1102 0.87
22 28 0.039 3.8 8.5 1.6 1 19 1108 1126 1108 1126 0.96
23 28 0.00014 0.014 16.2 1.4 1 23 1138 1161 1138 1161 0.95
24 28 8.1e-06 0.0008 20.1 0.3 2 23 1182 1203 1181 1203 0.95
25 28 0.00045 0.045 14.6 4.3 1 23 1209 1231 1209 1231 0.99
26 28 6.5e-07 6.4e-05 23.6 3.2 1 23 1237 1259 1237 1259 0.98
27 28 6.4e-07 6.3e-05 23.6 2.5 1 23 1265 1287 1265 1287 0.99
28 28 0.00018 0.018 15.8 0.4 1 23 1293 1317 1293 1317 0.93

Sequence Information

Coding Sequence
ATGGAGATAGGTACTGGAGCAGGTATCTATTCAGCAAGAATACAGATAAAGGAGTTCGGTGACTACCCGCTTCTTGCGGAGATACTAGCCATAAATAAGGCAGCTGGACACATACGTAATGAAGAGTCCACCAGATTGTTTTTGGGTAAAGAACCGGCAAACATCCCAAAAACCCGAGCCAAACGATCAAGCGTCAGGACCCAAAATCGAACAAAGAACGTAAAAACCGCTTCTAGCCGTTTCGAGTGTGATTCGTGCAACAAAACGTTCGCTTGGAAGAAGGACTTGTTTCGCCATGAAAAACATCACGATCCAAATAATAGGAAGTTCGGTTGTCCGCACTGTAGCCGTCGATTTATTCGAAAGGACAAACTGTCATCGCATTTGCTTGTTCATTTGGCGGGTGTTCCCAAGCGCCCATTAAAGAGTGCCCAATACTTTGCACATCATTTGTTTTCCGATAGACGATTCAAAGAGATCAAATGCATGATTTGCAACTTTGAAGCAGCGTCAGACGTGCCAGAGCTTCGTCGCCACATTATCTTACACGATAACTTGGAAATGATTGAAGGTCTGGAAAAGAGCGAAGTCGTTAAAACATTCTACCCGGAGAAAAGGCTGCACGAAGTCATTCCACTGATCGCTGCCCAAATCGCCGACAGAGAGTTGAACAAACTCTATTCGATTGTCAATTCCCATAGCTACGAGATGGGCATAAGCGATTCGGATCAAAGTGATCCGGACGCCAAAGAACCGAAATACACATGTGAAGTGTGCAGCAAACAGTTTAATCGAAAGCACAAGCTAATGACACACCAGGCGTACGAGCACACTTTCGATGAGTGCCCCTACAGCTGTGAGGGATGTAGTCTGAAATTCACCAGCAAGCCTGTGCTTGAGAGTCACTTGAAGTATCACTGTAAGAATCCAGACAAGATGCTGCAGTGCAAAAAGTGTCCAGGCCGATTCTCCTGGCTGAAGAACTTGGACAGCCACAGATGTGGCGGCAAGAAGATTGTACTTGACAAGGAGTGCACCACGTGCGAAGTGTGTAACAAAGTCTTCGCTTGGCCCAGGGATCTGAGAATACACAAAAAGACGCACATACCAGACGGCAAAGCACACAAGTGTTCGGTGTGCGGTGAGAGGTTTCTGCGGGCCCAGAATCTGCGTGGCCATTTGAAAAAGCATTCTGCAAATGTCTTCGCTACCTTAAAGCCGAAGAAATTTATGTGCACCCTCTGCAATTTGGAGTTCTTGAGCATTCCCAGCTTGAAATTTCATTTATACACGCACGCCGATGGCCAGACAGACATCAACTTTGACACTTGCGAGTTTATAACCAATTTTTATCCTGATCCGGATGTGGACAGAGGCACAATTTCACAGTACATTCGAGACTGCTTCAATGAGCAGAAACTCTGGCAAATGTATGCAGCGGTCAACAAATTTGGCCTCGAGATGGTCTTAAGCGACTCTGACTCGGCAAATGAGAATGAAGTCAAAGAACAGGATCCCTATGTCTGTGAGCTTTGTGATGTAAAGTTCACTCGTATGCAGGACATCCTGCAGCATCAGCTTGTCGAGCACGACTCGAAGAAGACTACTTTCCCgcacaagtgcaaaaagtgcgGCGATCAGTTTGTTTGCGCCGCCATTCTAAACCGTCACACGAAAAGTGAGTGCTCAAACTTGGGCAGAGTGCACGAGTGCAAGAAATGCGGCGCCAAGTTTATGTGGAAACAAAATTTGGCCGGCCACAACTGTGCACGTGACGGAGAGAACGGCGACAATGATAAAACATGCGAGACGTGCGGAAAGAAATTTGCTTGGCTGAAGGACCTGCACCGGCACAAGCGTAGCCACATACCGACTGAGGAAAAATTCGAGTGTCTAATATGTGACCGGAAGTTCAATCGAAAGGACAACATGCGGGCACACATGAAAATTCATGCGATAGACTACAAGTCGCCAAAGATGAAAGCGACCTTGAAATGGGAACAGCAGGACGAGAACTTGTGCAAGCCTCATGGTGTGAAGGAAATTCAGTGCAAGATCTGTTTGTCGAAACACAACTCCATTCGTGACTTGGCAAATCATTTGGCGACGCACACGGATCAGGAGACACTCAAGCACAGGCAAGCAGAGATCGGCGATATCACGATGATGCTGTACAACAAGCAGATGAGTCTGTCGGCGCTTTCGAAGCGAATCGGCAAAGATCTTGCGAATGGCAGTCATACGCGATTCTATTCTATCACCAACGAGTCCGGCTATGAGTTGAGTCTAATCGATTCGGAAACCAGTTCGGACTTAGAAGCCGAAGGCTATGATGACGCTGATGACGATGAGGTGCCCAAGGGTTACAACTGTTTGCTGTGCAAGAAGAACTTCAATCGAAAGTTTAAGATGTACAACCACCAAAAGTTGGATCATATGTGGGATGAATTGCCGCTCGAATGTTCGTTTTGTGGCCTGAGGTTTGCCAGCGATGGCATCTATTCTGCCCATCTAAAGAACGAGTGTAGTAATACCGAGAAGCAGTTCAAATGCAAGCAGTGCCCTATGAAGTTCACCTGGAAAGAGAATCTGAAGAACCACGAAAGGGTTATGCACGATAAGAATCCAGCAGTGGCACGGAAGCATCCTTGCAGTTTTTGTGACAGGAGTTTCCTTTGGCAGAAGGACTTGCTGAGGCATAGAAAGACGCACGGCACCATCGACAGGACATTTGAATGCACATGGTGCTTCAGGGTGTTTCTGCGAAAAGATAATCTCAAGATTCATATGAAAGTGCATAAGAATGCCACGCACCTACAACTACCCGACATCTACTATCTAGCTCGACCGAATGGTCACAAAAAGGCCGAATGTAAGCTCTGCGACGAAAAATACTCCACCGTCCATGAACTGCTATCGCACATGCAAAAGGCACACGTGCACGAGATGGATGCAACCATTCCCAATGTCGCCAGTTACTCGATTACAAACGCACTTGGCTACGAGATGGACATCGAGGACTCTGAAACAGAAAACGAGGTAGAAAACGAAAAGTACTGTTGTGAAATTTGTGACACCCGATTCGGTCGTCGCTTCAAACTGCTGCAACACCAACAGGCTCTTCACTATTCCGACAACATACCACACAAGTGCAGCTTTTGTCCGTTTAAATGCGTCTCGAAAGATGTGCTCAGCTATCATATGAGATCCCAATGCTTGAGCTCGTCGAAACAATTCCGCTGCACCCGTTGTACAATGCGGTTTATGTGGAAAGAAAATCTAGATCACCACGAAAGCCTGATCCATGACAGTGCTCGAACGCACAACTGCGATGTCTGCAAGAGGGATTTCGCGACACTTCACGACCTCAACAGCCACGATGAATGCAAGCCACCAGGTGATGCTCAATATTTCGAATGCGACATTTGTAACCGAAAGTATAACCGCAAAGATCGACTCATAAGGCACGTAAAGGATAAGCATACTGACATCAAGATCAAACAACGCGTCAAGAGCGCACCGCCGCCGGCCGATAAAATGTTCTTGTGCGCCTTCTGTGGCAAGGAAGTATCGAGTTCTTCGAATCTGATTATCCATATGCGCCGACATACGGGTGAGAAACCCTTCAAGTGTGAGTTTTGTAACAAGGGCTTTCCGCGGTCTTCCGATTTGAGTTGCCATAGGCGGACGCACACCGGCGAACGGCCGCACAAGTGTTCGGTGTGCGAAAAGGCTTTCTCGCGTTCGTACAAATTGCAGACGCACATGCGCATTCATTCGGGCGAGAGGCCATACAAATGTACATATTGCGAGAAGACATTCACGCAATCCAATGATTTGACGTTACATGTGCGGAGGCATACAGGCGAACGCCCCTACACATGCGAGACATGTGGCGAAAGGTTTATACAGGGAACCGCACTTCGCAATCATCGGCGAATGCGCGGACACTATGAAATGTAA
Protein Sequence
MEIGTGAGIYSARIQIKEFGDYPLLAEILAINKAAGHIRNEESTRLFLGKEPANIPKTRAKRSSVRTQNRTKNVKTASSRFECDSCNKTFAWKKDLFRHEKHHDPNNRKFGCPHCSRRFIRKDKLSSHLLVHLAGVPKRPLKSAQYFAHHLFSDRRFKEIKCMICNFEAASDVPELRRHIILHDNLEMIEGLEKSEVVKTFYPEKRLHEVIPLIAAQIADRELNKLYSIVNSHSYEMGISDSDQSDPDAKEPKYTCEVCSKQFNRKHKLMTHQAYEHTFDECPYSCEGCSLKFTSKPVLESHLKYHCKNPDKMLQCKKCPGRFSWLKNLDSHRCGGKKIVLDKECTTCEVCNKVFAWPRDLRIHKKTHIPDGKAHKCSVCGERFLRAQNLRGHLKKHSANVFATLKPKKFMCTLCNLEFLSIPSLKFHLYTHADGQTDINFDTCEFITNFYPDPDVDRGTISQYIRDCFNEQKLWQMYAAVNKFGLEMVLSDSDSANENEVKEQDPYVCELCDVKFTRMQDILQHQLVEHDSKKTTFPHKCKKCGDQFVCAAILNRHTKSECSNLGRVHECKKCGAKFMWKQNLAGHNCARDGENGDNDKTCETCGKKFAWLKDLHRHKRSHIPTEEKFECLICDRKFNRKDNMRAHMKIHAIDYKSPKMKATLKWEQQDENLCKPHGVKEIQCKICLSKHNSIRDLANHLATHTDQETLKHRQAEIGDITMMLYNKQMSLSALSKRIGKDLANGSHTRFYSITNESGYELSLIDSETSSDLEAEGYDDADDDEVPKGYNCLLCKKNFNRKFKMYNHQKLDHMWDELPLECSFCGLRFASDGIYSAHLKNECSNTEKQFKCKQCPMKFTWKENLKNHERVMHDKNPAVARKHPCSFCDRSFLWQKDLLRHRKTHGTIDRTFECTWCFRVFLRKDNLKIHMKVHKNATHLQLPDIYYLARPNGHKKAECKLCDEKYSTVHELLSHMQKAHVHEMDATIPNVASYSITNALGYEMDIEDSETENEVENEKYCCEICDTRFGRRFKLLQHQQALHYSDNIPHKCSFCPFKCVSKDVLSYHMRSQCLSSSKQFRCTRCTMRFMWKENLDHHESLIHDSARTHNCDVCKRDFATLHDLNSHDECKPPGDAQYFECDICNRKYNRKDRLIRHVKDKHTDIKIKQRVKSAPPPADKMFLCAFCGKEVSSSSNLIIHMRRHTGEKPFKCEFCNKGFPRSSDLSCHRRTHTGERPHKCSVCEKAFSRSYKLQTHMRIHSGERPYKCTYCEKTFTQSNDLTLHVRRHTGERPYTCETCGERFIQGTALRNHRRMRGHYEM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00312009;
90% Identity
iTF_00311221; iTF_00312009; iTF_00313678; iTF_00316187;
80% Identity
iTF_00311221;