Basic Information

Insect: Cheilosia grossa
Gene Symbol: -
Assembly: GCA_963082955.1
Location: OY720148.1:56734348-56736379[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 4.5 4.4e+02 2.0 2.0 1 23 179 204 179 204 0.84

2 12 0.016 1.6 9.7 1.1 1 23 210 232 210 232 0.85

3 12 0.055 5.4 8.1 0.3 2 17 267 281 267 282 0.80

4 12 2.8e-05 0.0027 18.4 3.3 1 23 296 318 296 318 0.98

5 12 3.2e-06 0.00031 21.4 0.1 1 23 324 346 324 346 0.95

6 12 1.9e-08 1.9e-06 28.4 0.2 2 23 352 373 351 373 0.97

7 12 0.019 1.9 9.5 0.6 2 23 381 403 380 403 0.91

8 12 5.2e-06 0.00052 20.7 1.0 1 23 427 449 427 449 0.99

9 12 2.7e-05 0.0026 18.5 1.9 1 23 455 478 455 478 0.93

10 12 0.0002 0.019 15.7 0.7 1 23 484 507 484 507 0.93

11 12 0.0001 0.01 16.6 0.7 1 23 513 535 513 535 0.98

12 12 1.3e-06 0.00012 22.6 2.0 1 23 541 563 541 563 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	4.5	4.4e+02	2.0	2.0	1	23	179	204	179	204	0.84
2	12	0.016	1.6	9.7	1.1	1	23	210	232	210	232	0.85
3	12	0.055	5.4	8.1	0.3	2	17	267	281	267	282	0.80
4	12	2.8e-05	0.0027	18.4	3.3	1	23	296	318	296	318	0.98
5	12	3.2e-06	0.00031	21.4	0.1	1	23	324	346	324	346	0.95
6	12	1.9e-08	1.9e-06	28.4	0.2	2	23	352	373	351	373	0.97
7	12	0.019	1.9	9.5	0.6	2	23	381	403	380	403	0.91
8	12	5.2e-06	0.00052	20.7	1.0	1	23	427	449	427	449	0.99
9	12	2.7e-05	0.0026	18.5	1.9	1	23	455	478	455	478	0.93
10	12	0.0002	0.019	15.7	0.7	1	23	484	507	484	507	0.93
11	12	0.0001	0.01	16.6	0.7	1	23	513	535	513	535	0.98
12	12	1.3e-06	0.00012	22.6	2.0	1	23	541	563	541	563	0.98

Sequence Information

Coding Sequence: ATGAGTGTGGCGGAAAATACTTGCAGGACATGTGGGAAACTGTCTGAACAGGAGGATGGCTCGGATCTCTATCCAATGTACACCTCATCAGAATACCACAACGAATTAAGAATGGTTTTGGAGGAATTCGAAATATGGAATTTAAACATCGCACAAGGTGATGGCTTGCCTCAGAAGATTTGCCTTACCTGTTTCGACAGTTTCTGTCAAATACACAACTTCCGTATGATATGCCAAGAGGCACAGTCGAATTTTGGTGAATTATGTATTGGTCTGGATATTATAATAAAGCTTGAAGCACAATATGACGATGTTGATATTGACTATCCAGAAGATTTCGAGGGCGAACAAACAATAACCGTTCAAGAGCACTACCAGTTCCCCGCGGATGAATCACAAAATGTTCCAGATGCAACCGCCGATgcgaaaacatttgaaaaactcTTAGAAACTCATAACACTGATGATGCGTCGGAAAAGGGCCAACAGAATGAGTTGGAGAAAGTGGTTGCGAATGTTTCCGACCGCAATCAGTATCAATGCGAATACTGCATGGATGTTGTCTGTTTCGATGATACAGAACTGCTTAATCAGCATTACAATGCCGTGCACTCGTCAGACCTTCCTTATCAGTGTCCTCAATGCGAAAAGTGCTTCGAGGCAAAAGCCAAACGCGATGGCCACGCTAGAGTCCACTTTCGTGAAACACTTGAATGTGAAACCTGTGGCAGGAAAATTCGTGGCGGTAAACGAATGATGGATCGTCACATTGAGGTGCATCACATCTTAAGGGTACGCGAATGTACTATATGTGGCAAGAAGTTTGACAAAATTACTCTGAAGAGATTTCACTACCACCTAAGCTGGCATAATGAAAACAAGTTGCACAAGTGCAAGTATTGCgataaaaagtttattcaagtAAAACAATTAGTTGTGCATGAGAAAACGCACACCGGAGCGAATCCTTTTCTCTGCACCGAGTGTGGAGTTGGATTTACAACTTCGGATCTTCTTGAGGCTCATATTAAAAAGCATGGAGTAGCGGACTTGCAATGCCCTATCTGCCCTAAATCATTCGCCCAACAACGTAACTTGAAGATCCACATGCAAATTCATGATCCGGATAAGAAAGGTATGCGCTGCGACATTTGCCCAAAGCTTTTTGGCTCTACTATGAATTTGCGTCTGCATAACTACAAAAGACATGGTGCCCCCGCCACACCTGCTATTCTGAATATCTTGGGAAAGCGCCAGAATTCCAAGCTTATAAAACCCTTCAAATGTGAAATGTGTTCTCAATCGTTTGTTGTGCAAACACAATTGGAGAAGCATGTGAAAACTCATAGTGAAAACAGGCCGTACTCTTGCATTCAATGCGGCAAATCATTTAAGCGGGATTCCCATTTAAAGTTGCACATGGATTCGGTGCACTTGAACAACAAACCACATAAGTGTTCTATCTGTGGATGGGGCTTTCTACAAAAAAGCAGCCTGAGGGAGCATATTACTGCGAAGCATGAACATAGAAAGGATTTCAAATGCGATGTTTGTGAAAAGACGTTCGCTATTGCAAAAACGCTTAAGATTCATAAGCTCAAACACTTGGAAAAGAAACCATTTAACTGCACCGTATGTGACAAGAGCTTCAGACTACAAAATTCTCTAAGAACACATATGAATTCCCACTGGCTTAAAAACGAAGCAAATAAGGCCGCCGGTGCTAAAAAGATGACATCGTAG
Protein Sequence: MSVAENTCRTCGKLSEQEDGSDLYPMYTSSEYHNELRMVLEEFEIWNLNIAQGDGLPQKICLTCFDSFCQIHNFRMICQEAQSNFGELCIGLDIIIKLEAQYDDVDIDYPEDFEGEQTITVQEHYQFPADESQNVPDATADAKTFEKLLETHNTDDASEKGQQNELEKVVANVSDRNQYQCEYCMDVVCFDDTELLNQHYNAVHSSDLPYQCPQCEKCFEAKAKRDGHARVHFRETLECETCGRKIRGGKRMMDRHIEVHHILRVRECTICGKKFDKITLKRFHYHLSWHNENKLHKCKYCDKKFIQVKQLVVHEKTHTGANPFLCTECGVGFTTSDLLEAHIKKHGVADLQCPICPKSFAQQRNLKIHMQIHDPDKKGMRCDICPKLFGSTMNLRLHNYKRHGAPATPAILNILGKRQNSKLIKPFKCEMCSQSFVVQTQLEKHVKTHSENRPYSCIQCGKSFKRDSHLKLHMDSVHLNNKPHKCSICGWGFLQKSSLREHITAKHEHRKDFKCDVCEKTFAIAKTLKIHKLKHLEKKPFNCTVCDKSFRLQNSLRTHMNSHWLKNEANKAAGAKKMTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00314587;
90% Identity: iTF_00316229; iTF_00314587; iTF_00315392;
80% Identity: -