Basic Information

Insect: Cheilosia grossa
Gene Symbol: -
Assembly: GCA_963082955.1
Location: OY720145.1:55259485-55262685[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00016 0.016 16.0 1.1 2 23 388 409 387 409 0.97

2 16 1.9e-05 0.0019 18.9 1.0 1 23 415 437 415 437 0.98

3 16 1.5 1.5e+02 3.5 0.2 1 12 443 454 443 457 0.89

4 16 3.5e-05 0.0035 18.1 3.5 1 23 474 496 474 496 0.98

5 16 5.9e-05 0.0058 17.4 0.2 1 23 529 551 529 551 0.96

6 16 7.5e-05 0.0074 17.1 1.8 1 23 557 579 557 579 0.98

7 16 8.1e-06 0.0008 20.1 1.0 2 23 690 711 689 711 0.97

8 16 4.7e-06 0.00046 20.9 3.1 1 23 717 739 717 739 0.98

9 16 0.0028 0.27 12.1 0.6 1 23 745 768 745 768 0.97

10 16 0.00018 0.018 15.9 1.2 1 23 779 801 779 801 0.98

11 16 6.9e-06 0.00068 20.3 1.4 1 23 813 835 813 835 0.98

12 16 0.017 1.7 9.7 2.0 1 23 841 863 841 863 0.97

13 16 0.00012 0.012 16.4 0.6 2 23 869 891 868 891 0.95

14 16 0.11 10 7.1 0.2 1 23 899 922 899 922 0.95

15 16 0.00066 0.065 14.1 0.5 3 23 932 953 931 953 0.93

16 16 0.0026 0.26 12.2 0.8 2 23 959 980 958 980 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00016	0.016	16.0	1.1	2	23	388	409	387	409	0.97
2	16	1.9e-05	0.0019	18.9	1.0	1	23	415	437	415	437	0.98
3	16	1.5	1.5e+02	3.5	0.2	1	12	443	454	443	457	0.89
4	16	3.5e-05	0.0035	18.1	3.5	1	23	474	496	474	496	0.98
5	16	5.9e-05	0.0058	17.4	0.2	1	23	529	551	529	551	0.96
6	16	7.5e-05	0.0074	17.1	1.8	1	23	557	579	557	579	0.98
7	16	8.1e-06	0.0008	20.1	1.0	2	23	690	711	689	711	0.97
8	16	4.7e-06	0.00046	20.9	3.1	1	23	717	739	717	739	0.98
9	16	0.0028	0.27	12.1	0.6	1	23	745	768	745	768	0.97
10	16	0.00018	0.018	15.9	1.2	1	23	779	801	779	801	0.98
11	16	6.9e-06	0.00068	20.3	1.4	1	23	813	835	813	835	0.98
12	16	0.017	1.7	9.7	2.0	1	23	841	863	841	863	0.97
13	16	0.00012	0.012	16.4	0.6	2	23	869	891	868	891	0.95
14	16	0.11	10	7.1	0.2	1	23	899	922	899	922	0.95
15	16	0.00066	0.065	14.1	0.5	3	23	932	953	931	953	0.93
16	16	0.0026	0.26	12.2	0.8	2	23	959	980	958	980	0.96

Sequence Information

Coding Sequence: ATGTCTGTCAAGTTGGACGACACAGTGTGCCGCGTATGTTTAAGTTCCTTTGGCAACATACTTATCTTCGATGGATGCGGCAAAGATGATCAATTTCGATACTGCACTTCTTTAGAGGCGAACGTGGACGATGGACTGCCGTCTAAGCTCTGCAAGAAGTGCAACGATCATTTGAAGGTTGCCTATGATTTCCGATTTCAGGCAATTTATGCCGAGAAATATTTCAGGAAGACAATATTTTTGCCTTCTTTCAAAAAAGAAGATACTGAAGGGACTGCAGACATCTCGGATGCGCGTAACTGTACCGATGAATTGGATGAAAATATGGCTGAGATTGATATGTTGCTAGCAATACACACTGAAACCATCGATGAGGGCGACGAAGACAATGACGATATGAATAATTCTGGCTTCTACGATGATGACGAGAGTGTCGATGAGAACAGAAAGCATGTTGAAATCATTGGGATGGATACTTTCGAGAAGGAGCAGCGAGAACAGAAGGATCAGaaagtaaaaattgaaatagcTGCTGTCCCTCAACCGCTTGTGTCATCAACTGTGTGTACTTTGGAATATGTGCCGCCGAAACCAGTAACAGGGTTACCCGCGGAATCACACCAACCTGCAACAACAAGCAACAATACGATGCCGAATGAAGACATAAATGACTTACAACAGTATACAACTTCAAGTCCTTTTTCCACACAATCCGTGCAAGATGTGCAGATCGATCATGGAACCGAAACATCCCTCCAATTAGAGATTATCCCAATCATGAAGAATGATCCATCCACGTATGACTTTAGTACTACTGCTACAGTTACCGACGCCTATGATGCATATAATGCTGCGGGGCACATTCAGTACCAACAGCCTATGTCCATGCACCTGCAATACGAGCAAACAACCGTGACATTGCCTTTACAAGAAGCTGTTTCTGTTCCAGACAACTATGAGTTCCCCTATCAACCACAGTTCTCTACATACACCGCCCAAACAATCGAAATTAACCCTGCTCAGCAGGAGCAGGAGCAACCAAATCAGATCGTTACAATTGTAAGAACTGAAACTCAACCCGAAACCACCACAAAGACTGAAAATCTGAATCCCAAAGCTAAAAAGGCTAAGCGTGAAGGTCCCAGTCGCAGGGACAAAATCGAGTGCAACATCTGTGGAAGCATCTTCACGCATTTGAACTCGTTGAAGACACATCTCCTTAAGCACTCTGGTGAAAAACCCTTCCGCTGTGAGTTTTGCGATAAGGCCTTTGCAAGAAAGACTGTCCTCAATATCCACCGACGTCTTCACACTGGAGAGAAACCCTATCAATGTCCTCTTTGCTCAAGCGCCTTTCGGCATCTTCAAAAAGATCACGAACAGGAAGTGGGTGCCAATTTCCGCAAAGACAAAGTCGCCTACATCTGCTCCATATGCAACAAGTCGCGTTGCTCCAAATATTCTCTGGCGTCTCACATGAAGACACACTCGAGCGATGCAAAGGCCAGACGCAAGATTGTTCgacgaaaaaaggaaaaatccgACGGCAGCAATAGCACCGCAGGTAACAGCGCCCAACTCAAGTACTCGTGCAAGATCTGCCAAAAAGGTTTTCCCAACAAATGGGAACTTAGTACTCACGCCGCGTCTCATGACATGCACAAGACGTTTGAGTGCGACGTCTGTCAGCGAACATTCGAAAAGAAGTTTCAGTTGCTGTACCATCTGCAGACGCACGATGGTGGCGATGAACTTGTAAAAGCAAAGGTGCAACCAGCGATTGAAAAGCGAGAAAGTGTTGATAAAGTAACGGAGAAGTCGGTGCAAAAGAAACTGCCAACTGGTAAAAAACCGAAAAGAAAACTCTCGGTGAGGAAGCGGCATAAAAGGAAAgcgaaaaatgcaaatattgcCAGCGATGAGGCCGAGGAACCACTggaggaagaacaaaatgacgATGAAGATGACAAGGACTTCGATCTTGTAAAAGCAGACAAGGACACAAAGAAGAGGACACATCGAGCACAGCGCGAGAACCTCAAAGCACTACGCGCGGGTAgtaaaattgaatgtcacaTATGCGAGGCTGTATTTACGCATCCGACATCGCTGAAAACTCACATGTTGGTGCATTCAGGTGAGCGCCCCTTCAAGTGCGACCATTGCGATAAGTCATTTGCACGGAAAACTGTTCTCAATATTCATCGAAGGCTGCACACTGGAGAGAAGCCCTACAAGTGTCCTCTCTGTGATAGTGCCCACGTCACAAAGGATGCTCTAATGCGCCACATGTCGAAGGACCACGACGATGACAGGGAAGCCGATCGAATTAAGTTCACCTGTGGCATCTGCCATAAGGCGATGGGCACCAAGTACTCCCTGCAAGCCCATATGAAACTGCACGAACAGAACTCAACGGCCGAGACAGAAGTTAAGTTCTCATGTAACACATGCACTGAATCCTTTGACAGCAAGTCCGACTACACCAAGCACATGGAAGTGCATGACTCAAATCGTAATTTCCAATGTGACATCTGCCAGGTCACATTCGAGAAGAAATTCAAGCTGCTCTTCCATTTGCAGACGCACAAGATCGAGGACTTGCCCTGCAAAAAGTGCAAGGAAACATTTACAATAAGAGAGAACCTTATTCAACACATAAAGTTGCAGCATATGGGCCCTCGAAATATGGACTTTCAGTGTCCGCAGTGCAATATCGGGCAGTACGACACCCGTGATCTGAAACTGCACATGTTGAATGCACACGACGTGAGTATGGGCCCCCTAAACGCCTGCGATCTATGCGGGGAGAGCTATTCCACTGCAGCGCAATACTATAAACACATGCACGACAAACATGACACAATTAGCAAAACGTGCAACGAATGTGAGAAGTACTTTGATTCGAGGAAGGCCTTCGATAAGCACATACTGGCGCACTACATGTAA
Protein Sequence: MSVKLDDTVCRVCLSSFGNILIFDGCGKDDQFRYCTSLEANVDDGLPSKLCKKCNDHLKVAYDFRFQAIYAEKYFRKTIFLPSFKKEDTEGTADISDARNCTDELDENMAEIDMLLAIHTETIDEGDEDNDDMNNSGFYDDDESVDENRKHVEIIGMDTFEKEQREQKDQKVKIEIAAVPQPLVSSTVCTLEYVPPKPVTGLPAESHQPATTSNNTMPNEDINDLQQYTTSSPFSTQSVQDVQIDHGTETSLQLEIIPIMKNDPSTYDFSTTATVTDAYDAYNAAGHIQYQQPMSMHLQYEQTTVTLPLQEAVSVPDNYEFPYQPQFSTYTAQTIEINPAQQEQEQPNQIVTIVRTETQPETTTKTENLNPKAKKAKREGPSRRDKIECNICGSIFTHLNSLKTHLLKHSGEKPFRCEFCDKAFARKTVLNIHRRLHTGEKPYQCPLCSSAFRHLQKDHEQEVGANFRKDKVAYICSICNKSRCSKYSLASHMKTHSSDAKARRKIVRRKKEKSDGSNSTAGNSAQLKYSCKICQKGFPNKWELSTHAASHDMHKTFECDVCQRTFEKKFQLLYHLQTHDGGDELVKAKVQPAIEKRESVDKVTEKSVQKKLPTGKKPKRKLSVRKRHKRKAKNANIASDEAEEPLEEEQNDDEDDKDFDLVKADKDTKKRTHRAQRENLKALRAGSKIECHICEAVFTHPTSLKTHMLVHSGERPFKCDHCDKSFARKTVLNIHRRLHTGEKPYKCPLCDSAHVTKDALMRHMSKDHDDDREADRIKFTCGICHKAMGTKYSLQAHMKLHEQNSTAETEVKFSCNTCTESFDSKSDYTKHMEVHDSNRNFQCDICQVTFEKKFKLLFHLQTHKIEDLPCKKCKETFTIRENLIQHIKLQHMGPRNMDFQCPQCNIGQYDTRDLKLHMLNAHDVSMGPLNACDLCGESYSTAAQYYKHMHDKHDTISKTCNECEKYFDSRKAFDKHILAHYM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00313679;
90% Identity: iTF_00315370;
80% Identity: -