Basic Information

Insect: Chalcis sispes
Gene Symbol: -
Assembly: GCA_949987625.1
Location: OX465094.1:17868802-17881798[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 9.6e-05 0.018 16.7 1.4 1 23 434 456 434 456 0.96

2 18 4e-06 0.00075 21.1 1.9 1 20 462 481 462 484 0.94

3 18 3.2e-05 0.0059 18.2 0.7 1 23 490 512 490 512 0.98

4 18 7.8e-05 0.015 17.0 4.4 1 21 518 538 518 540 0.95

5 18 2.4e-05 0.0045 18.6 4.6 1 23 546 568 546 568 0.99

6 18 2.4e-05 0.0045 18.6 5.3 1 23 574 596 574 596 0.97

7 18 9.2e-06 0.0017 19.9 7.1 1 23 602 624 602 624 0.97

8 18 8.9e-08 1.7e-05 26.3 2.7 1 23 630 652 630 652 0.98

9 18 6.6e-05 0.012 17.2 6.7 1 23 658 680 658 680 0.97

10 18 2e-05 0.0038 18.8 5.8 1 23 686 708 686 708 0.98

11 18 5.4e-07 0.0001 23.8 2.9 1 23 714 736 714 736 0.98

12 18 8.1e-06 0.0015 20.1 7.8 1 23 742 764 742 764 0.98

13 18 2.6e-05 0.0048 18.5 9.1 1 23 770 792 770 792 0.98

14 18 3.3e-05 0.0063 18.2 7.5 1 23 798 820 798 820 0.98

15 18 0.00095 0.18 13.6 8.8 1 21 826 846 826 848 0.94

16 18 1.2e-05 0.0023 19.5 0.4 1 23 854 876 854 876 0.98

17 18 0.029 5.5 8.9 4.5 1 23 886 908 886 908 0.98

18 18 4.7e-07 8.8e-05 24.0 1.3 1 23 914 936 914 936 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	9.6e-05	0.018	16.7	1.4	1	23	434	456	434	456	0.96
2	18	4e-06	0.00075	21.1	1.9	1	20	462	481	462	484	0.94
3	18	3.2e-05	0.0059	18.2	0.7	1	23	490	512	490	512	0.98
4	18	7.8e-05	0.015	17.0	4.4	1	21	518	538	518	540	0.95
5	18	2.4e-05	0.0045	18.6	4.6	1	23	546	568	546	568	0.99
6	18	2.4e-05	0.0045	18.6	5.3	1	23	574	596	574	596	0.97
7	18	9.2e-06	0.0017	19.9	7.1	1	23	602	624	602	624	0.97
8	18	8.9e-08	1.7e-05	26.3	2.7	1	23	630	652	630	652	0.98
9	18	6.6e-05	0.012	17.2	6.7	1	23	658	680	658	680	0.97
10	18	2e-05	0.0038	18.8	5.8	1	23	686	708	686	708	0.98
11	18	5.4e-07	0.0001	23.8	2.9	1	23	714	736	714	736	0.98
12	18	8.1e-06	0.0015	20.1	7.8	1	23	742	764	742	764	0.98
13	18	2.6e-05	0.0048	18.5	9.1	1	23	770	792	770	792	0.98
14	18	3.3e-05	0.0063	18.2	7.5	1	23	798	820	798	820	0.98
15	18	0.00095	0.18	13.6	8.8	1	21	826	846	826	848	0.94
16	18	1.2e-05	0.0023	19.5	0.4	1	23	854	876	854	876	0.98
17	18	0.029	5.5	8.9	4.5	1	23	886	908	886	908	0.98
18	18	4.7e-07	8.8e-05	24.0	1.3	1	23	914	936	914	936	0.97

Sequence Information

Coding Sequence: ATGAATAGTGAGCAACATGCTCTGCCAGCGACAACGCAGGCACAACAAGAGGAAGTAAATGCAGGTCAGAGTGGTCGCTCTTCATATTCAGGTGCTCTGACAACTCCAACGAGTCTTGGCAATGTAGGAAATAATCCACATTCATCTGCAGACCTGCGCGTAGGTACAGCTGTAGCATTAGCTTCAGTAGCTAAGTATTGGGTTCTCACCAATCTTTTTCCTGGGCCTATACCCCAGGTTTCTGTGTATCATCATCCTCATCATAGGGGTGGTGCAGGAAGTAGTGAAACTCAAACTACCAAAGATTCAACTGCTTTGTTAAACCAGGATATGACATTAACTTCTAATGCACATCATCAGGTTTCAGCTTCACATCATCACCAACCATCGGTCAGTACAAGTAGTCACCACAGTTCCCTACAGTCTACTGCACAGattcCAGTTTCTCTTCCTGGACTCAACCTAGACGGAAGTCATCTTCAGGCAAGTGTGAGTCACTTACAGGCAGCACATGCTCAAATGCAACAACAGATGCAAacacagcaacagcagcaggcACAGTTGcatcagcagcaacagcaagcGCAGGCTCATCATCAGATGCAGAGTCATCAGAATGCTCAAAGTGCAGCTCAAGCAAATCCAAATCAAAGCTCCTCCAGGGATGACAAAAGCAAGGAAGAGCCATCCGATCGCGGTCATGAAAACCAAGTACATTCGCACGTTCAAAATGATCATCAACACCAACAAGCACAGGATTTACAACAAAGCCTAATGcatcaacaacagcaacagcagcagatTGGTGTCAACATTGGGGGTGCTTCAACTGCTGATGGTACCAATCCAAGTAAAGTAGAAAAAGttgagaagaaggaagaaataCGTCAATTAAATATGACACAATTTCAAGTGCCCGACTTAAAAACAGGAGGTCACATGATGGATGTTCGAACTGCTGATGGATCAATTGTCAAAATTAGTGCAGCCAGTGATCAAGATCTTGCAAAGACATTAGGTGTTGATATATCTCAATACATTAATAagGGAGCTGTGAATGTTGAGGAATTGAATCAAATAAATCAGTTACTTGCATACCATGAAGTTTTCGGCAAGCTACAAAGCGAAATAGCTGCAGGAACAACATTGATTGGCGGTACGGTGCCTACTCAAACAGTTACGACAATACAAAATGGTGCACCAATAGTACAGCAGGTGCCACTAAACAAGTTTGACATAAAAACAAGTGATGGCGAAGCAACTCCCGGACCAAGTGGCTCGCCAGTCTCGGTTGGAAGTCATGCCTGCGAGGTTTGCGGGAAAATTTTTCAGTTTCGTTATCAGTTAATTGTACATCGGAGATATCATACAGAAAGGAAGCCTTTTACCTGCCagGTATGCGGCAAAGCTTTTACTACTGCATCTGATTTGACGCGTCATGGAAAATGTCATTTAGGCGGTTCCATGTTTACATGTGCAGTTTGCTTTCATGTTTTCGCTAATGCACCGTCATTGGAGCGACATATGAAGCGACACGCTACCGATAAACCATACAATTGCACCGTTTGTGGCAAAAGTTTTGCTAGAAAAGAGCATCTTGATAATCATACTAGGTGTCACACAGGAGAAACTCCATATAGatGTCAGTACTGCGCGAAAACGTTCACCCGCAAGGAGCACATGGTAAACCACGTACGAAAGCACACGGGCGAGACGCCACATCGTTGTGATATCTGCAAGAAGTCGTTCACGCGCAAGGAGCACTTCATGAATCACGTTATGTGGCACACTGGCGAGACACCACATCACTGCCAGGTTTGTGGCAAAAAATATACGCGCAAAGAGCATTTGGCCAATCACATGCGCTCGCACACCAACGACACGCCCTTCCGTTGTGAGATTTGCGgcAAATCGTTCACGCGCAAAGAACACTTTACGAATCACATAATGTGGCACACAGGCGAGACGCCACATCGTTGTGACTTCTGCTCGAAGACGTTCACGCGGAAGGAGCACCTGCTGAACCACGTCCGACAGCACACGGGTGAGTCACCACACCGATGCGGCTTCTGCTCCAAATCGTTCACCAGAAAGGAACACCTTGTTAACCACATCCGCCAACACACAGgAGAGACGCCCTTCCGCTGTCAGTACTGTCCGAAAGCGTTTACGCGGAAGGACCACCTGGTGAACCACGTCAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACGAAATCCTTCACGCGGAAGGAACATTTGACAAATCACGTGCGTCAACATACAGGCGAGTCGCCCCACCGCTGCCACTTCTGCTCCAAGTCGTTCACCCGCAAGGAGCACCTGACGAATCACGTGCGCATCCATACCGGCGAGTCGCCACATCGCTGCGAGTTCTGCCAACGTACCTTCACCCGCAAGGAGCATCTCAACAATCATCTAAGGCAGCACACCGGCGACTCATCCCATTGCTGTAACGTCTGCTCTAAGCCCTTCACGCGCAAGGAGCATCTGATAAACCACATGCGCTGCCACACGGGCGAGCGGCCGTTCGTTTGCACCGAGTGCGGCAAGAGCTTCCCGCTGAAGGGCAACCTCCTTTTCCACATGCGCTCGCACAACAAGGGCAGCCAGGCCGAGCGGCCGTTCCGTTGCGATCTCTGTCCCAAGGACTTCATGTGCAAGGGCCACCTCGTCTCGCACCGGCGCTCCCACTCGGACGAGCGTCCCCACAGCTGCCCGGACTGCGGCAAGACCTTCGTCGAGAAGGGCAACATGTTGCGTCACTTGCGCAAGCACGCGGCCGAGGGCCCGCCCACTCAGGTGAGCAGCGCGGCCTCGGCCCTCGCGGGCCAACaagccgtcgccgccgccgccgcagcGGCTGCCGCGGCCTCCGGGGCTCCGGCCCTGCCGATACCGAGCGCCGCGGCGGCAGCGGCCGCCGTCCTCGTCGGCCACCCGCTCGCGCCACCGCCCGCACCCGCCGTCGCCCTGCCTCAACACACCGTCGTCGTACCGACGCCCCCGGGCGTTCTCGCCTCCTACTGA
Protein Sequence: MNSEQHALPATTQAQQEEVNAGQSGRSSYSGALTTPTSLGNVGNNPHSSADLRVGTAVALASVAKYWVLTNLFPGPIPQVSVYHHPHHRGGAGSSETQTTKDSTALLNQDMTLTSNAHHQVSASHHHQPSVSTSSHHSSLQSTAQIPVSLPGLNLDGSHLQASVSHLQAAHAQMQQQMQTQQQQQAQLHQQQQQAQAHHQMQSHQNAQSAAQANPNQSSSRDDKSKEEPSDRGHENQVHSHVQNDHQHQQAQDLQQSLMHQQQQQQQIGVNIGGASTADGTNPSKVEKVEKKEEIRQLNMTQFQVPDLKTGGHMMDVRTADGSIVKISAASDQDLAKTLGVDISQYINKGAVNVEELNQINQLLAYHEVFGKLQSEIAAGTTLIGGTVPTQTVTTIQNGAPIVQQVPLNKFDIKTSDGEATPGPSGSPVSVGSHACEVCGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFTTASDLTRHGKCHLGGSMFTCAVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCSKPFTRKEHLINHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSQAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVSSAASALAGQQAVAAAAAAAAAASGAPALPIPSAAAAAAAVLVGHPLAPPPAPAVALPQHTVVVPTPPGVLASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00286639;
90% Identity: iTF_00144031;
80% Identity: -