Cruf007705.1
Basic Information
- Insect
- Cerceris ruficornis
- Gene Symbol
- Hr39
- Assembly
- GCA_963989415.1
- Location
- OZ022517.1:49782948-49788257[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 2.9 3.1e+04 -4.8 6.5 120 159 33 72 17 107 0.52 2 5 2.2 2.3e+04 -4.5 8.9 46 155 328 431 315 451 0.39 3 5 4 4.2e+04 -9.0 11.1 77 147 462 536 425 566 0.37 4 5 7.3e-08 0.00077 20.2 0.0 1 21 632 652 632 669 0.92 5 5 3e-70 3.2e-66 225.7 0.0 193 408 807 1023 683 1023 0.91
Sequence Information
- Coding Sequence
- ATGTCGGAGCAAAACGGGTCCGGCGAGGGCCCTGGGCCGGGCCCCGGCCCAGCCCCGGGTTGGTGGCCGACCTCACAGTCCTGGAAATCGAGCAACTCCGCCGTCTCCGCTTCCTCCTCCACAGCCACCACTTCCTCCGCAGCCTCCTCCTCCGCAGTTCCGAACAATTCCGCCTCCGCCTCCGCCTCCGTCTCTGCGTCCTGCACGACCTCCTGCTCTTCCTCGGCGACCTCCACCTCGGCCCCTTGCGGCTCCTCGTCCTCTCTCGGTCCAACTTGCACGATCACCGCAGCTCGATCCACGGAAGCGGGCAAAAACGTCTCCGTCACGACGATCAACGTTCCGCCCAATCAGGATATGCACGATGGGAAAGGTGTGTGCAAGTATCTCGGAGGGCAAAACGGCGTGACGGTGTCCGTCGTATCGAACTGTCCAGGCTCTGTCTTGGGCTGCGGAAATACGAATGTCGTCTCCACAACCGGAATGGGTACCAATACCGGATCACACAGTATCGGTATCGGAATCGGTGTCGGTATCCTTGGACAGAATACCACAGACATCGACGACGCGGAGGATAGCGACGGTGAAATAAGCAAGATCGACTTCCGTGGTGTTAATTTGCGGACAAAGAAGAAACGAGATGCTTCAGGAAGCCAGAGCGGAGAAAAGATCGGCGACGGGGAGTTGGACGGTGAAGGAGGCTGCTGCGATGGAAACGATTCCTCTCAGCAGCAGCAACCCGAAAGACCCATGTCGTGGGAGGGCGAACTCTCGGACCAAGAAATGTCTTCCAATACGATCACTAACCagGACCAGCATGAGGAAACGTCGATGGAAGGTATCCAAGTGTGCAGCGCGAGTCCTGGACCCATGGAACAGAAGTTCCCTATAAAACCGGAGCCGGACTTTCGGTCTAGTCCGGGATTCGCGCTCGGATCCTTCCACGAAGCAGGTTTGCCTCTGAATCATGGTCAACAgttgcagcagcaacaacagcaacaacagcagcaacaacaacaacgcgGCATCGAGAACCTCGAGCAAGCGCAGCAGAGCGATCTGCCTCTTCTCGTAGGAAAGCTTCTCGGTGGTTACAACAGCTCTACCCCCAATCACAGTCCAGTCCTCAATCCCAGGCACCATCTGACCAAACACAGTCATACGAGATCACAGGTGCCGTCTCCAGATTCTGCGATTCATTCCGCGTACAGCGTTTTCAGTTCGCCAACACAGAGTCCACACGCAGCGCGCCACTTTGCGCTAGGAGCAGGCAGCCCGATACCGTCCTCTTCGCTCTCCCTCTCCCGGCATAGCTTCAACAATTCCACCTCCTCGTTGTCGTTGTCACTCTCGCACTCTCTCTCAAGAAACAACTCGGACGCCTCGAGCAGTTGCTACAGCTATGGCTCTTTGAGTCCACCCACGCATTCGCCCGTCCAACAGCCAAGGCAtccgcactcgcattcgcactcgcactcgcagcACCATCAACATCAGGTCGCCCAAGGCAGCCCGCTTCATCTTCCAGCCAGCGGCTCGACGCCCGTCGCGCATCATTATTCCTCCTCTGCAGCGGGCTCCGAACTTTCCCCGGAGGGCCATCCCACCGCGGATGATCAGGAAGATTGTCGAATACCTTCGGCACCTTCCGGCATCTCCACCAGGCAACAATTAATCAACAGTCCCTGTCCCATCTGCGGCGACAAAATCAGTGGTTTTCACTACGGTATCTTCTCCTGCGAATCGTGCAAAGGATTCTTCAAGCGCACCGTCCAGAATCGCAAGAACTACGTGTGCCTTAGAGGCGCAGGCTGTCCGGTAACCGTGGCCACGAGGAAAAAGTGTCCAGCTTGCCGTTTCGATAAGTGCCTCAATATGGGGATGAAACTGGAGGCGATCAGAGAAGATCGCACCAGGGGTGGCAGGAGCACTTATCAGTGCACCTATACTCTACCAGCGAATCTTGTTGGAAGTCCTGCCGGTGGTATCGCCGCCGATAAATTGACCACTGGTGGAAATTGCAGTCCCGCTCCGCCTGGCAGTGAACACTATTACTCGGTCAGACATTACTCGAATCATTCCCACAAGATGCAAGTGGTGCCTCAACTGCTGCAAGATATCATGGACGTCGAACACCTCTGGCATTACAACGACAACGATCGCATGGCAGGGGTTCAACCTAACGGCGGAGCGACCGCGAACGTCGCCAGAAATACCGACGCGATGTTGCTAGGAATGGCAGCCGGGGGTGGCTCGGCGGTTGGAGTTCATGCGGGGAATGGCGGTGGAGGGGGAGTAGAATGTACATCGAACGGTACCACTGGCAACGGTAATCCCAGTAATAGTAGAGCCGACAACAGACCGTGCTCCACCGGATCGACCACAGGCACTCACGAGGACCGCTCTGCTTCTGTTGGTAACGTCAGCAATGGCAACTCCCAAATCGGTACACATACGAATGGCAATCCAACGCAACATCCGGATTTCCTCTCGAATCTTTGTAACATCGCTGATCATCGGCTGTACAAAATAGTCAAGTGGTGCAAGAGTCTTCCGCTGTTTAAGAACATCTCGATCGATGATCAAATCTGCCTCCTGATCAACTCGTGGTGCGAGCTACTGCTCTTCTCGTGCTGTTTCCGCAGCATGAGCACTCCTGGCGAAATTCGAGTGTCTCTCGGCAAGTCGATCACCTTGGAACAAGCTAGACAGCTTGGTTTAGCGACTTGCATTGAGAGGATGCTTGCATTCACCAATAATCTGAGAAGACTTAGGGTAGATCAATACGAGTACGTGGCCATGAAGGTAATAGTTTTGTTGACATCGGATACGAGCGAATTGAAGGATCCCGAAAAAGTCAGATCGTCTCAGGAGAAGGCTCTGCAAGCGTTGCAACAATATACCATCGCAAGGTATCCGGAAATGCCTGCGAAATTTGGGGAGCTGTTATTGAGGATTCCGGATCTCCAGAGAACGTGCCAAGCAGGTAAAGAATTATTGAGCGCGAAACGAGCCGAGGGAGAAGGCAGCTCTTTTAATTTGCTGATGGAATTGCTAAGGGGAGACCACTGA
- Protein Sequence
- MSEQNGSGEGPGPGPGPAPGWWPTSQSWKSSNSAVSASSSTATTSSAASSSAVPNNSASASASVSASCTTSCSSSATSTSAPCGSSSSLGPTCTITAARSTEAGKNVSVTTINVPPNQDMHDGKGVCKYLGGQNGVTVSVVSNCPGSVLGCGNTNVVSTTGMGTNTGSHSIGIGIGVGILGQNTTDIDDAEDSDGEISKIDFRGVNLRTKKKRDASGSQSGEKIGDGELDGEGGCCDGNDSSQQQQPERPMSWEGELSDQEMSSNTITNQDQHEETSMEGIQVCSASPGPMEQKFPIKPEPDFRSSPGFALGSFHEAGLPLNHGQQLQQQQQQQQQQQQQRGIENLEQAQQSDLPLLVGKLLGGYNSSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHFALGAGSPIPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPHSHSHSHSQHHQHQVAQGSPLHLPASGSTPVAHHYSSSAAGSELSPEGHPTADDQEDCRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLVGSPAGGIAADKLTTGGNCSPAPPGSEHYYSVRHYSNHSHKMQVVPQLLQDIMDVEHLWHYNDNDRMAGVQPNGGATANVARNTDAMLLGMAAGGGSAVGVHAGNGGGGGVECTSNGTTGNGNPSNSRADNRPCSTGSTTGTHEDRSASVGNVSNGNSQIGTHTNGNPTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKDPEKVRSSQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00733987;
- 90% Identity
- iTF_00306342;
- 80% Identity
- iTF_00306342;