Basic Information

Insect: Ceratosolen solmsi
Gene Symbol: -
Assembly: GCA_000503995.1
Location: NW:521170-529032[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0036 0.22 11.2 1.8 1 23 361 383 361 383 0.97

2 17 0.063 3.8 7.3 1.3 2 23 427 448 427 448 0.94

3 17 0.0012 0.071 12.7 1.0 2 23 504 525 503 525 0.97

4 17 6.1e-05 0.0037 16.7 2.7 2 23 578 599 577 599 0.97

5 17 0.0041 0.25 11.0 0.4 1 20 628 647 628 652 0.92

6 17 0.00021 0.012 15.1 3.5 1 23 731 753 731 753 0.97

7 17 0.0004 0.024 14.2 4.5 1 23 799 821 799 821 0.96

8 17 0.00019 0.011 15.2 0.7 1 20 826 845 826 847 0.94

9 17 0.025 1.5 8.5 0.3 2 23 858 879 858 879 0.97

10 17 8.5e-06 0.00051 19.4 0.7 2 23 917 938 916 938 0.97

11 17 1.7e-05 0.001 18.5 1.6 1 23 943 965 943 965 0.95

12 17 3.1e-05 0.0019 17.7 1.9 1 23 971 993 971 993 0.98

13 17 3e-06 0.00018 20.8 0.4 1 23 1009 1031 1009 1031 0.95

14 17 2.5e-07 1.5e-05 24.3 0.6 1 23 1037 1059 1037 1059 0.99

15 17 1.2e-05 0.00072 19.0 0.2 1 23 1065 1087 1065 1087 0.98

16 17 9.9e-05 0.006 16.1 4.1 1 23 1093 1115 1093 1115 0.96

17 17 0.007 0.42 10.3 0.4 1 20 1121 1140 1121 1142 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0036	0.22	11.2	1.8	1	23	361	383	361	383	0.97
2	17	0.063	3.8	7.3	1.3	2	23	427	448	427	448	0.94
3	17	0.0012	0.071	12.7	1.0	2	23	504	525	503	525	0.97
4	17	6.1e-05	0.0037	16.7	2.7	2	23	578	599	577	599	0.97
5	17	0.0041	0.25	11.0	0.4	1	20	628	647	628	652	0.92
6	17	0.00021	0.012	15.1	3.5	1	23	731	753	731	753	0.97
7	17	0.0004	0.024	14.2	4.5	1	23	799	821	799	821	0.96
8	17	0.00019	0.011	15.2	0.7	1	20	826	845	826	847	0.94
9	17	0.025	1.5	8.5	0.3	2	23	858	879	858	879	0.97
10	17	8.5e-06	0.00051	19.4	0.7	2	23	917	938	916	938	0.97
11	17	1.7e-05	0.001	18.5	1.6	1	23	943	965	943	965	0.95
12	17	3.1e-05	0.0019	17.7	1.9	1	23	971	993	971	993	0.98
13	17	3e-06	0.00018	20.8	0.4	1	23	1009	1031	1009	1031	0.95
14	17	2.5e-07	1.5e-05	24.3	0.6	1	23	1037	1059	1037	1059	0.99
15	17	1.2e-05	0.00072	19.0	0.2	1	23	1065	1087	1065	1087	0.98
16	17	9.9e-05	0.006	16.1	4.1	1	23	1093	1115	1093	1115	0.96
17	17	0.007	0.42	10.3	0.4	1	20	1121	1140	1121	1142	0.89

Sequence Information

Coding Sequence: ATGGACGCTGTCGAAATAAATACGTCGGAGGATTCGCGGCTGCCACCGTCTAGCGACGACGACGTCGGCATGGTTTCGGAGCACCAAGTAGAAATATGTCGTGTTTGTCTTCTCGGTAATCCCATGATGCGGGGCATTTTTCATGTGGATGGTGTTTTGTCCCTGTCCGATAAGGCTATGAGTCTTACAAGCATTAAGATGCTGCCTGGAGATGGTTTACCTTCTAATATCTGTTGCGATTGCACGGATAAGCTTGAATCAGCGTATAAGTTTAAATTGCAAGTGGAACAAGCGGATAGTGTATTAAGAGAGAGATTAGATTCGCTAAACATGAAAGAAGAACTTTTTTTTAGTGATGTGGATGTTAATTTATCGAGCCATAGGCATAACATTGGAGAGATAACAGAGGAAAGTTTACTTCTTAAAGATCATATGGATTTATTGAGTGTTCAGAAACTAAGCGAGGGCGATAATTTGAAAAGTGAAGATTTACaaaaacaatcaaataatgttattattgagCAACATGAAATAAAGgagtataaaaatgaagaagaaaatgcacagttaattgaaaatacagaagaaaataaaattcctcTGGACCAAAATTTGCAGGAAATTAGCAATGACCAACAGATCTGTAGCGAAGATAATCAACAACTACaagaaataacaaatgaacaGCATAATCAATCATTTGGAGCACAGGTTTTACAAGAAATAATGCTTCATGAAATTAACGATCAAGAGAGAATACAAGAATTGAATCAAAATCATCAATTAGCAATGTACGAACATAATTATGTTGCTGAATCACAACCGTGTGATATTACAAATGAGAATCATACATTGAATGTAGagattaTTGAGAAAGATGATAAAGAAGAGGTACAAAATCaagaagtttataataatgtaccgGAAGAACCTTCATCGATTGAATCAACTCGCAGAAGCAAACGGAAAATTAATCAACGAAAATCTCACGTTGAAGAATTTGACGaagacaattattttgaaaatcttaacCTCAGCTCTAGATTAAAAGTCCAATTAGATAAATCAGAAAAAgtgttttttatatgttatctatgcgataaacaatttatatcgaAGGAAATTTTGAAAGAGCATATGCACTCCCACGAAGAAGTGAGAAAAACACTTACGTATATGCATAAGGTAGTGGAGAAATCAGAAAAAGTACCGGAAAAACCAGATAGTCCAACAAATTCTGTTTCATTGAAATCACCTTCGAGTGGTAAACATCCAAACACTTGTCCTCATTGTGGGAAAGAATAtctgtatattatatcatacaaCAAACATTTGAAACAACATGAGAAGAGCGGAACAAAGGAAGAACTTATGCCTTTAGAAGTTTCATTTCACGAAGATGAGGatacattgaattttcatgGCTACAATGAAAATCCATCGACGAATTCGGATAGTGAAGaaagtgagaaaaaaaataaaaaagaagttgCAAAGAGGGACAGTATGAAGTGTAATACATGCGATGAAGTGTTTgacacaataattaaattaaggaaTCATCGGTCAAAGCATGTTGTTGATGGCGTGCTCTCTGAACAGGatctaaaaaatgatattgaacAGCTGAACATCGAAGggAAACTTACCAAAAGTAACgaggataatgaaaaatttaacgagGATGCGTCAAATGAATTGCCATTGAAAAAGCAGGAATCAAAAGAATTAAAGTGTCCTCATTGTTCTATGAGCTACGCTCACAAAAAATCTCTTGCTAGACATATAGAGAGCCATTCCGGTACCAAGTACACTTGTAAACTCTGCAGGAAAGACCATCTGCATCGTCACTCGGAACAACACAGCGGTCGATACAAAAACTTCAGATGCACACAATGCAATAAGATTTTCGGCAATGAATTGACGTTGAGGAGTCACGTGATAGCAACTAATCACAAAACGACGTTGCACGGGAAAGAATACGATCCGAATAAAAGGATAAAGAGGGTGGCAGCCAGAGCAGCCCAAAGGATCATCGATCAAATCAAGACAGACCTCAGTCTCGATGATTTCGAAGAAGATGAGCGAGACAGAGAAAAGGATAAGGATTTTGACGAGGTCAAGGCTGAAATGTGCGCAACAAAGAACGACCATTCGGCAATGAAAAAGATTCAACGCTGCTCCATGAATTTTTACTGCGCGACTTGTAATCAGAAATACAGCTCTAAACATGCTCTTACAAAGCATATGGAACAGCATGTAAAAGAAGAGAGTACAATCAAAcaagataaagtaaaaaatgtcgAGGAACATCGAGAGAATCAGGAAAATGAAGATAACGATGAGGAAGATGATGACGATTTTGAAAGTGGACTCGATTGGCCCACGGATAGTCATGAGTGCCTCACGTGTAAGAAGCGCTACAGCACGAAGAAGTCTTTACTGCGTCATCAACTGCTGCACGAGGAGCCGAACTTCGAGTGCGATATCTGCAATGTAAAGTTTTATCGAAAGGATAAACTGAAAGCACACTACGATAAGTGCTCGGAGAAGAATCCCGATCAAGTGCGTAAATGTAATATCTGTGGCGATAGCTttgaaaacaatgaaatattgaggGAACATAGGATCAAACACGTGACGGAAGGCATATTGACAGAGGAGGATTTGCGAGAAATCGAACCGCGACCCGaggataaaaatgaagaaaaggcACCGCGTAAAAGGCGAACGGATATTGTCGGCCTTGAATGCACCGAGTGCAACAAACGTTACACATCCAGGAAAGGATTATTAAGGCATATACAAGTACACGAAGGGAAGAAGTATCTGTGCGACATATGtccaaagaaattttataggcGAGAGCATCTGAAAATTCATGTAGCAAAACATAACATGATTAAACCATACAAATGCCCTCGATGTACAAAGCGATTCATCAAAGAAGAGCAATTAAACAATCACTTGACCAAGCACGACAGAAGTTTCAAAAAGGCAAAAGAACCCGATACCTCGAAAAGATTTTTGTGCGAAATATGCTCAAAGAGCTTTACTCAATCGACTACTCTCATAGCGCATTTACGGGCTCATAATGGCATTAAGCCTTACGTCTGCGAAGTTTGCTCACGGCCCTTCACAACGAATGCCTACTTAAAGATGCACATGAGGACGCATACGCAGGAACGACCCTACATCTGTCAATACTGCTCCAGGGCGTTTGCCCGAGCTGATACTTTGGCCAATCACTTAACTACGCACACTGGGGAAGCCAAATACCATTGTAAATACTGTCCGAAGAACTTTCGAAGACTTAAATCGCTTAAGGAGCACGTTTTTATACACACCGGGCAGCGACCGTACGCCTGCCCGACTTGCGACAGaaggtttaataataatggtagtAGGTACGCCCACAGCAAAAGGTGCAAGCAGAATGCATTGCAAGCCAGAGCTCCATCGCTTGGCACGCAGCTCATCGCTACCGAGCACGAACAACACGAACAACACGAACAAAACGAGCAGCAGGAGCAGGAACAACAGGAGCAGGATCAGCAAGAGATACAGAATCAGCTACAGTCACAGAGGCTACATCAGACTACCATTGATCAGGCTCAAATAATCAAACCTCAGAATATTAAAACCATTACGATTACACGACCGGACGGCGCTCTTGGCCAACAACATGTTATGGCGCATCAGGAAATTCTGATGCCTCTGATATTGCCGCTTACAGTTACGCTTGCCGATGTCGGCGAAGAGGTCATACTTCCCGAAGGGACGAAAATTTTCACCGCGTAA
Protein Sequence: MDAVEINTSEDSRLPPSSDDDVGMVSEHQVEICRVCLLGNPMMRGIFHVDGVLSLSDKAMSLTSIKMLPGDGLPSNICCDCTDKLESAYKFKLQVEQADSVLRERLDSLNMKEELFFSDVDVNLSSHRHNIGEITEESLLLKDHMDLLSVQKLSEGDNLKSEDLQKQSNNVIIEQHEIKEYKNEEENAQLIENTEENKIPLDQNLQEISNDQQICSEDNQQLQEITNEQHNQSFGAQVLQEIMLHEINDQERIQELNQNHQLAMYEHNYVAESQPCDITNENHTLNVEIIEKDDKEEVQNQEVYNNVPEEPSSIESTRRSKRKINQRKSHVEEFDEDNYFENLNLSSRLKVQLDKSEKVFFICYLCDKQFISKEILKEHMHSHEEVRKTLTYMHKVVEKSEKVPEKPDSPTNSVSLKSPSSGKHPNTCPHCGKEYLYIISYNKHLKQHEKSGTKEELMPLEVSFHEDEDTLNFHGYNENPSTNSDSEESEKKNKKEVAKRDSMKCNTCDEVFDTIIKLRNHRSKHVVDGVLSEQDLKNDIEQLNIEGKLTKSNEDNEKFNEDASNELPLKKQESKELKCPHCSMSYAHKKSLARHIESHSGTKYTCKLCRKDHLHRHSEQHSGRYKNFRCTQCNKIFGNELTLRSHVIATNHKTTLHGKEYDPNKRIKRVAARAAQRIIDQIKTDLSLDDFEEDERDREKDKDFDEVKAEMCATKNDHSAMKKIQRCSMNFYCATCNQKYSSKHALTKHMEQHVKEESTIKQDKVKNVEEHRENQENEDNDEEDDDDFESGLDWPTDSHECLTCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNEILREHRIKHVTEGILTEEDLREIEPRPEDKNEEKAPRKRRTDIVGLECTECNKRYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCPRCTKRFIKEEQLNNHLTKHDRSFKKAKEPDTSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTTHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNALQARAPSLGTQLIATEHEQHEQHEQNEQQEQEQQEQDQQEIQNQLQSQRLHQTTIDQAQIIKPQNIKTITITRPDGALGQQHVMAHQEILMPLILPLTVTLADVGEEVILPEGTKIFTA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00464125;
90% Identity: iTF_00304582;
80% Identity: -