Crub021066.1
Basic Information
- Insect
- Cerastis rubricosa
- Gene Symbol
- retn
- Assembly
- GCA_949152445.1
- Location
- OX424535.1:7599807-7604183[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.3e-17 2.7e-13 51.5 0.1 29 89 4 62 1 62 0.93 2 2 3.4 1.4e+04 -2.2 0.0 25 38 189 202 151 205 0.55
Sequence Information
- Coding Sequence
- ATGGCGAAGTCGGTGCTAGACCTGTACGAGCTGTACAACCTGGTGATAGCCCGCGGTGGGCTGGTGGAGGTCATCAACAAGAAGTTGTGGCAGGAGATCATCAAGGGACTGCGGCTGCCATCGTCGATCACGTCTGCTGCCTTCACGTTACGCACACAATACATGAAATACCTGTACGACTACGAGTGCGAGAAGAAGAACCTATCAACAAGAAGTGAGCTGGACGCAGCTATTGAAGGCAACAAGCGTGAGGGTCGCCGGGCCTCGGGACAGTACGACGCACAAGCTGCTTTAGCTATGCCCCCACTAAATCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCATATGCAGCCGCTGTCACTGTCGCTGGGGGGCGTAGCCCCACGCCTGCCGCCACTACCGCCGCACGCGCCGCACCTGGCACAGCACGACATCGAGTACAGGGTGCGCGAGTACATGAAGATGATACAGCAGCAGAGGGAACTTATGAGAAATGGCTCCGAATCACCCCCCAGCAACGGCCAAGCTCCAATAATGTCACCTCGTGACGCCGCCCTCAGTGCCATCGACGTCTCCCGCCTCACTCTCTGGTCGCTctacaacaataacaacaacaacagcccACAACCAGACCTTGAGCCACAACGTATGGGTTACAGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCGCTCACGAGCGGCGGCAAGCGCGAGGCGTGCCGCTCCCCCGCGCCGCCCGCCAAGCGCCGCACGCCTCGCCCCGTGTCCCGCCCCGCCTCGCCCCGCGACCACCTGCACTCGCCGCCACAGCACCGCCACAGCCGCCGGGACGCCACGTCACCGCCACAGATCAATGGTATGCCCAATACTAATGGTGTAAATGGGGCTGCCTTCAAGATTACCACCAGAGGAGACGCAAGCACAGGAGACCAGCAACTTGTAGTGTCAATAGAGCTGAACGGAGTAACGTATGAAGGTGTACTGTTCCCCTCAGGCAACGGTCAGAACGGACACAGACAAATGGTGTcctaa
- Protein Sequence
- MAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGQAPIMSPRDAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQRMGYSEALNLSESPNSLTSGGKREACRSPAPPAKRRTPRPVSRPASPRDHLHSPPQHRHSRRDATSPPQINGMPNTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -