Cleu014351.1
Basic Information
- Insect
- Cerastis leucographa
- Gene Symbol
- -
- Assembly
- GCA_963082945.1
- Location
- OY720363.1:1225447-1226127[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.8e-09 1.3e-05 26.0 0.0 4 39 11 45 8 50 0.87 2 2 0.19 2.5e+02 2.7 0.0 24 45 77 98 73 98 0.87
Sequence Information
- Coding Sequence
- ATGGCGCCTATTAAAAATTATGCTCCTAAGCAAATGGGAGATGCCATTGAGGCGGTACGAGGTGGTGAATCTGTAGCGGCTGCAGCAAAGCGCTTCGGAGTTCCACGGATCACTTTATACAACAAAATATCAGGTAAAAGCCCCATGCAATGTAGTATGGGACCAACTACCGTACTAACAAGCACAGAAGAGGATTTGTTGGTAAAGTGGCTTTTAGCGATGGCCGAAAGAAGATTTCCTATCTCCAAAGAAACTCTCCTAGATAGTGTTCAGCGGATCATCACAGTGCAAAACAAATCCAATCCTTTCACGCAAAATAGACCAGGTAGAAAATGGTTTGCATCATTCCTAAAAAGACATCCCATAATAGCACAAAGAACAGCAGAAAATTTAACCGCCGCACGAGAGAACGTGACTGAAGAAGAAATAGTATCCTGGTTTCGAGAGATACACGAATATTTAGCATCTGTCGATTTGTACCAGGTGCTCGAAGATCCAAGCAGAGTTTTTAACACAGACGAAAGTGCATTCTTTCTTTCACCAAAACCTGGACAAGTGCTTGTGAAGCGGGGTGAGAAACATGTATATGCTGCAAGTGGCGATGACAAGGAGAATTTAACAGTTTTGGTGACTGCAAATGCTGCGGGAAAACTTGCACCGCCGATGATAGTTGGCTGGTAA
- Protein Sequence
- MAPIKNYAPKQMGDAIEAVRGGESVAAAAKRFGVPRITLYNKISGKSPMQCSMGPTTVLTSTEEDLLVKWLLAMAERRFPISKETLLDSVQRIITVQNKSNPFTQNRPGRKWFASFLKRHPIIAQRTAENLTAARENVTEEEIVSWFREIHEYLASVDLYQVLEDPSRVFNTDESAFFLSPKPGQVLVKRGEKHVYAASGDDKENLTVLVTANAAGKLAPPMIVGW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00361570; iTF_01534751;
- 90% Identity
- iTF_01534751;
- 80% Identity
- -