Cleu013853.1
Basic Information
- Insect
- Cerastis leucographa
- Gene Symbol
- retn
- Assembly
- GCA_963082945.1
- Location
- OY720362.1:13385903-13396437[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-19 2.2e-15 58.0 0.0 18 89 45 114 41 114 0.94 2 2 3.9 1.7e+04 -2.5 0.0 25 38 241 254 203 256 0.54
Sequence Information
- Coding Sequence
- ATGGGCGGCCGCGCCGGGCTCGCGGACGCCTCTCATTGGTCCGCCGCGGGGTTGTCGGGCTCCAAGGGCCTTGATACTGCTCTCGATAAGCGGGAGGCGTCGAATGTCGATTCGATCGATTATCGCCCATGGACTCCAATCAACCGGCTACCAATAATGGCGAAGTCGGTGCTAGACCTGTACGAGCTGTACAACCTAGTGATAGCCCGCGGTGGGCTGGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCGGCTGCCATCGTCGATCACGTCTGCTGCCTTCACGTTACGCACTCAATACATGAAATACCTGTACGACTACGAGTGCGAGAAAAAGAACCTATCAACCAGGAGTGAGTTGGATGCAGCTATTGAAGGCAACAAGCGTGAGGGTCGACGGGCCTCGGGACAGTACGACGCACAAGCTGCTTTAGCTATGCCCCCACTAAACCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCATATGCAGCCGCTGTCACTGTCGCTGGGGGGCGTGGCTCCACGCCTGCCGCCACTGCCGCCGCACGCGCCGCACCTGGCACAGCACGACATCGAGTACAGGGTGCGCGAGTACATGAAGATGATACAGCAGCAGAGGGAGCTTATGAGAAATGGTTCCGAATCACCCCCCAGCAACGGCCAAGCGCCAATAATGTCACCTCGCGACGCCGCCCTCAGTGCCATCGATGTCTCCCGCCTCACTCTCTGGTCGCTCTAtaacaataacaacaacaatagCCCACAACCGGACCTTGAGCCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCGCTCACGAGTGGCGGCAAGCGCGAGGCGTGCCGctcgcccgcgccgcccgccaagCGCCGCACGCCGCGGCCCGCGTCGCGCCCCGCCTCGCCTCGCGAGCACCTGCACTCGCCGCCGCAGCACCGCCACAGCCGCCGGGACGCCACGTCGCCGCCACAGATCAATGGTATGCCCAATACTAATGGTGTTAATGGGGCTGCCTTCAAGATTACCACCAGAGGAGACGCAAGCACAGGAGACCAGCAACTAGTAGTGTCAATAGAGCTGAACGGAGTAACGTATGAAGGTGTACTCTTCCCCTCAGGCAACGGTCAGAACGGACACAGACAAATGGTGTcctaa
- Protein Sequence
- MGGRAGLADASHWSAAGLSGSKGLDTALDKREASNVDSIDYRPWTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGQAPIMSPRDAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSLTSGGKREACRSPAPPAKRRTPRPASRPASPREHLHSPPQHRHSRRDATSPPQINGMPNTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -