Cpis024879.1
Basic Information
- Insect
- Ceramica pisi
- Gene Symbol
- retn
- Assembly
- GCA_963859965.1
- Location
- OY982543.1:8515295-8524668[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-19 1.1e-15 59.0 0.0 17 89 69 139 57 139 0.92 2 2 5.7 2.6e+04 -3.0 0.0 25 38 267 280 229 281 0.57
Sequence Information
- Coding Sequence
- ATGGGCGGCCGCGCCAGGCTCGCGGCCGCCTCTCATTGGCCCGCCGCGGGGTTGTCGGGCTCCAAGGGCCTTGATACTGCTCTCGATAAGCGGGAGGCGTCGAATGTCGATTCGATCGATTATCGCCCGTGTCGCGCGCCGCCGACCGCGACCGTCTGCATCGCGCCACTTGACACTTTGATGACCCGCGCCGCCTCATTAATACGCACTCCAATCAACCGGCTACCGATAATGGCGAAGTCGGTGCTGGACCTGTACGAGCTCTACAACCTGGTGATCGCTCGCGGCGGCCTGGTGGAGGTCATCAACAAAAAGCTGTGGCAAGAGATCATCAAGGGTCTGCGGCTGCCGTCGTCCATCACGTCAGCTGCCTTCACGTTACGCACACAGTACATGAAATACCTGTATGACTACGAGTGCGAGAAGAAGAACCTATCGACCAGGAGCGAGCTGGATGCAGCCATCGAAGGCAACAAGCGTGAGGGGCGTCGCGCCTCGGGACAGTACGACGCACAGGCTGCCTTAGCTATGCCCCCACTAAACCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCACTGTCGCTGTCGCTGGGCGGCGTCGCGCCGCGCttgccgccgctgccgccgcacGCGCCGCACCTTGCGCAGCACGACATCGAGTACAGGGTGCGCGAGTACATGAAGATGATACAGCAGCAGAGGGAGCTTATGAGAAATGGCTCCGAATCGCCCCCAAGCAATGGTCCAGCGCCAATTATGTCACCCCGTGATGCAGCCGCCCTCAGTGCCATCGACGTCTCTCGCCTCACTCTCTGGTCACTctacaacaataacaacaataacAGCCCACAACCGGATCTTGAGCCACAACGCGAAGCTCTGAACCTGAGCGAGAGCCCCACCTCTCTGTCCGGCGTGAAGCGCGAGGCGTGCCGctcgcccgcgccgccgcccgccaaGCGCCGCACGCCGCGCCCCGCCAGCCGGCCCGCCTCGCCGCGCGCCGACCTGCACTCGCCGCCGCAGCACCGCCACAGCCGCAGGGACGCCACCTCGCCGCCACAGATCAATGGCATGCCCAATACTAATGGAGTCAATGGAGCTGCCTTCAAGATCACTACTAGAGGAGACGCGACGACAGGAGACCAACAATTAGTGGTATCAATAGAGCTGAATGGAGTAACGTATGAAGGAGTACTATTCCCCTCAGGCAACGGCCAGAACGGACACAGACAAATGGTGTCTTAA
- Protein Sequence
- MGGRARLAAASHWPAAGLSGSKGLDTALDKREASNVDSIDYRPCRAPPTATVCIAPLDTLMTRAASLIRTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPTSLSGVKREACRSPAPPPAKRRTPRPASRPASPRADLHSPPQHRHSRRDATSPPQINGMPNTNGVNGAAFKITTRGDATTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -