Crun012151.1
Basic Information
- Insect
- Cephus runcator
- Gene Symbol
- -
- Assembly
- GCA_030142495.1
- Location
- JARQTC010000749.1:219696-222824[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.45 4.3e+02 0.8 0.2 28 39 45 55 45 61 0.70 2 2 1.5e-09 1.4e-06 28.0 0.0 2 40 63 100 62 102 0.93
Sequence Information
- Coding Sequence
- ATGGAGACTGCGGAGGCAGCTGATTCATTGATTCCATTGAAAGTTTCAGTGGAAGggcataacaaaaaaattatttggaaaaagtGCATCAAAGAAGTGATAGGGACTACAGAAACTGCAGACTCATCTGTCATTCCACGGACTACTTTGAAAagGAAAAGGACAAATGTTGAACGGAAATACACAAATTCTGATCTCGAGAAAGCTTTAGACGCGGTGAAAACGGGAATGCCTCTAAAAAGAGCATCGAATCTTTACAAGATTCCGAGGACGACATTGCTTTACAAGAAGCGTGGTACATTACCACCTGTAATGAAATCTCCTGGACCTAAATGCATACTTGGCGAAGAAAATGAACGCAAGCTCGTTGAGTGGATTTTGCACATGAATCGAAGCGGCTTCCCTCCAACTCGGGTCCAATTATTGGATAGTGTTCAACTGCTTATAAAGCATCTAAAGATCAAGACTCAGTTTAAGGATAATCGCCCTGGGAGACATTGGTACAAAGCTTTTAAGAATCGTAACCGGGAAATAGCTGAAAAAGTTACACAAAATTTGACGCGCAATCAAGCTGATTTAAGTGATAAAAAGCTTCGAGGGTGGTTCTGCCAGGTACAGAAGTATTTTCAGTCGAAGTCACTTCTTAATATTGATCCTTCTCGCGTATTTAGTTGCGACGAGTCGGCTTTTTTTCTAAGTCCGAAGGGTGGCTCGGTATTGACCAAAAAAGGTGATAAAACGGTGTACAATTTcatcaaaaataatgaaaaagaatgcTTGACTACGCTCATCTGTGGAAGTGCGAGCGGGGAACTCGCGCCACCGATGGTACTTTTTCCTTACAAACGGATTCCCCGATATGTCGCTGCACGAATGCCAAGAGACTGGGCCATCAGTCACTCGGACAGTGGGTGGATGACTGGGGAAACGTTTTTCGAGTATGTCACGAACGTTTTTTACCGATGGTTGCTGAAGATTAAAGTCGTGTTCCCAGTCGTACTGTTTGTAGACTGGCATACTTCGCATTTGACCATGGCGTTAAGCGATTTTTGTAGAGAAAAAGGGATTGAGCTCGTGTCGCTATACCCAAATGCAAGTCACATCTTACAGCCGATCGACGTcgcattttttcattctctcaaGGAAATATGGGGGAATGTAGTTCGTAACTGGCGACTAGAAAATAATGGTCAACGTTTAAGGCGAGAAGACTTTGCACCGCTTCTTCAAAAAGCTATCGAGACTCTCGACACAAAAAGTATTCTCAAAAGTGGTTTCAGAACAACTGGGCTCTACCCTCTTTCAGCGGATAGAATTGATTACCAGGAAATTTTTACGAACTACGATAGCTCCGAAAAGATCACTCCGGTGACTGAAACCGAAGAACCTCGGTATAAAGAACTGTTAGAGTATGTTGAAAATAACATCGAAACCGAAGTGCTGGAGATGTTCAGAGACGTCAAAGAGGGAGCAGAATGGAGTGGCGATCTGGCACATCAAAGTTTATTCTACTTGTGGCGAAAAATTAAGGATATTAGTATCAATGCTAGCGAAGTCAGTCCCGCCATTTCAGCCGACAGCGTTGTCCAAGGACACTTAGATGACAAAAATGGAGTTTCGATTTACAGGGAATATGCAACGGGTAATATGaaacaagaagaaggaaaCCATGAAAACCTAAACGTGATAAAGATGGCTGAGTTCCTTCCAGTTGGAGATAATGTTTTGAATATTCGAGACGAGATTTCGCATAATCTTTCAGCAGTCTACGCAGATTGTAAAACTATTGATACTACTCTCTACGAGATCGACGCACCTGGAACGTTAGTATCGTTCGTAAATGTCAACGAAGATCCACAAGAAGGGACGAAGCtgataaaattggaaaatcaatCCACTGACGAAGAGCCGACGGAGCTTGTAGAATTGCGAAGTCAATGCATTGatgaaaaaccgaaaaaaCTGACTTCTCCGAAGCCATCGACATCAAATTCCTTCCCAAAAAGGAGCttccgaaaaataaatcaagcaAAACGTAAAGTGCCAGCAATACTTACATCCGACGAATGGATAGAATATGCCAAGCCGAAAGATGAGAAAAAACATacagaagaagagaaaaaaaaggcaagaaATGAAACACTTTTGAGAAAAGCCCATCTGAAAAAGGAgtcaaaaagaaagagacaaaaacCTGACAGTAATCTCGATGAGGATTCTACTGATGAAGAAAACACAATTGAATTCATGTCTGTCTATCCTTAA
- Protein Sequence
- METAEAADSLIPLKVSVEGHNKKIIWKKCIKEVIGTTETADSSVIPRTTLKRKRTNVERKYTNSDLEKALDAVKTGMPLKRASNLYKIPRTTLLYKKRGTLPPVMKSPGPKCILGEENERKLVEWILHMNRSGFPPTRVQLLDSVQLLIKHLKIKTQFKDNRPGRHWYKAFKNRNREIAEKVTQNLTRNQADLSDKKLRGWFCQVQKYFQSKSLLNIDPSRVFSCDESAFFLSPKGGSVLTKKGDKTVYNFIKNNEKECLTTLICGSASGELAPPMVLFPYKRIPRYVAARMPRDWAISHSDSGWMTGETFFEYVTNVFYRWLLKIKVVFPVVLFVDWHTSHLTMALSDFCREKGIELVSLYPNASHILQPIDVAFFHSLKEIWGNVVRNWRLENNGQRLRREDFAPLLQKAIETLDTKSILKSGFRTTGLYPLSADRIDYQEIFTNYDSSEKITPVTETEEPRYKELLEYVENNIETEVLEMFRDVKEGAEWSGDLAHQSLFYLWRKIKDISINASEVSPAISADSVVQGHLDDKNGVSIYREYATGNMKQEEGNHENLNVIKMAEFLPVGDNVLNIRDEISHNLSAVYADCKTIDTTLYEIDAPGTLVSFVNVNEDPQEGTKLIKLENQSTDEEPTELVELRSQCIDEKPKKLTSPKPSTSNSFPKRSFRKINQAKRKVPAILTSDEWIEYAKPKDEKKHTEEEKKKARNETLLRKAHLKKESKRKRQKPDSNLDEDSTDEENTIEFMSVYP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00295930; iTF_00294388; iTF_00295164; iTF_00293640; iTF_00292203; iTF_00298229; iTF_00296694; iTF_00292862; iTF_00291456;
- 90% Identity
- iTF_00291456;
- 80% Identity
- -