Cpyg012208.1
Basic Information
- Insect
- Cephus pygmeus
- Gene Symbol
- -
- Assembly
- GCA_036026175.1
- Location
- JAYRBY010000761.1:218835-221252[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.4 1e+04 -3.2 0.0 28 36 45 54 45 58 0.73 2 2 6.4e-10 1.1e-06 28.8 0.0 1 40 62 100 62 102 0.94
Sequence Information
- Coding Sequence
- ATGGAGACTGCGGAGGCAGCTGATTCATTGATTCCATTGAAAGTTTCAGTGGAAGgGcatgacaaaaaatttatttggaaaaagtgCAGAAAAGAAGTGATAGGGACTACAGAAACTGTAGACTCATCTGTCATTCCACAGACTACTTTTAAAagGAAAAGGACAAATGTTGAACGGAGATACACAAATGCTGATCTCGAGAAAGCTTTAGACGCGGTGAAAACGGGAATGCCTCTAAAAAGAGCATCGACTCTTTACAAGATTCCAAGGACGACATTGCTTTACAAGAAGCGTGGTACATTACCACCTGTAATGAAATCTCCTGGACCTCAATGCATACTTGGCGAAGAAAATGAACGCAAGCTCGTTGAGTGGATTTTGCACATGAATCGAAGCGGCTTCCCTCCAACCCGGGTCCAATTATTGGATAGTGTTCAACTGCTTATAAAGCGTCTAAAGATCAAGACTCAGTTTAAGGATAATCGCCCGGGGAGACATTGGTACAAAGCGTTTAAGAATCGTAACAGGGAAATAGCTGAAAAAGTTACACAAAATTTGACGCGCAATGAAGCTGGTTTAAGTGATAAAAAGTTTCGAGAGTGGTTCTGCGAGGTACAGAACTATTTTCAGTCGAAGTCACTTCTTAATATTGATGCTTCTCGCGTATTTAATTGCGACGAGTCGGCTTTTTTTCTAAGTCCAAAGGGTGGCTCGgtattgacaaaaaaaagtgataaaacaGTGTacagtttcataaaaaataatgaaaaagaatgcTTGACTACGCTCATCTGTGGAAGTGCGAGCGGGGAACTCGCGCCACCGATGGTACTTTTTCCTTACAAACGGATTCCCGGATATGTCGCTGCACGAATGCCAAGAGACTGGGCCATCAGTCACTCGGACAGTGGGTGGATGACTGGGGAAACGTTTTTCGAGTATGTCGCGAACGTTTTTTACCCATGGTTGCTGAAGATTAAAGTCGTGTTCCCAATCGTACTGTTTGTAGACTGGCATACTTCGCATTTGACCATGGCGTTAAGCGATTTTTGTAGAGAAAAAGGCATTGAGCTCGTGTCGCTATACCCAAATGCAAGTCACATTTTACAGCCGATCGATGTcgcattttttcattctctcaaGGGAATATGGGGGAATGTAGTTCGTAATTGGCGACTAGAAAATAACGATCAACGTTTAAGGCGAGAAGACTTTGCACCGCTTCTTCAAAATGCTATCGAGACTCTCGACACAAAAAGTATTCTCGAAAGTGGTTTCAGAACAACTGGACTCTACCCTTTTTCAGCGGATAGAATTGACTACcagaaaaatgttaagaacTACGATAGCTCCGAAAAGATCTCTCCGGTGAATGAAACCGAAGGACCTCGGTATACAGAATTGTTAGAGTATGTTGAAAATAACATCGAAACCGAAGTACTGGAGATGTTCAGAGACGTCAAAGAGGGAGCAGAATGGACTGGCGATCTAGCACATCAAAGTTTATTCTACTTGTGGCGGAAAATTAAGGATATTAGTATCAATGCCAGCGAAATCAGTCCCGCCATTTCAGCCGACAGTGTTGTCCAAGGACACGTACATGACAAAAATGGAGTTTCGATTTACAGTGAATATCCAACGGGTAAGGTgaaacaagaagaaggaaaCGATGAACACCTAAACGTGATAAAGATGGCTGAGTTCCTTCCAGTTGGAGATAATGTTTTGAATATCCGAGACGAGATTTCGCACAATCTTTCAGCAGTCGACGCAGATTGTAAAACTATTGATACTACTCGCTACGAGATCGACGCACCTGGAACGTTAGTATCGTTCGAAAATGTCAACAAAAATCCACAAGAAGGGACGAAACtgataaaattggaaaatcaaTCCACTGACGAAGAGCCGACGGAGCTTGTAGAATTGCGAAGTCAATGCATTGACGAAAAGCCTAAAAAACCGACTTCTCCGAAGCCATCGACGTCAAATTCGTAA
- Protein Sequence
- METAEAADSLIPLKVSVEGHDKKFIWKKCRKEVIGTTETVDSSVIPQTTFKRKRTNVERRYTNADLEKALDAVKTGMPLKRASTLYKIPRTTLLYKKRGTLPPVMKSPGPQCILGEENERKLVEWILHMNRSGFPPTRVQLLDSVQLLIKRLKIKTQFKDNRPGRHWYKAFKNRNREIAEKVTQNLTRNEAGLSDKKFREWFCEVQNYFQSKSLLNIDASRVFNCDESAFFLSPKGGSVLTKKSDKTVYSFIKNNEKECLTTLICGSASGELAPPMVLFPYKRIPGYVAARMPRDWAISHSDSGWMTGETFFEYVANVFYPWLLKIKVVFPIVLFVDWHTSHLTMALSDFCREKGIELVSLYPNASHILQPIDVAFFHSLKGIWGNVVRNWRLENNDQRLRREDFAPLLQNAIETLDTKSILESGFRTTGLYPFSADRIDYQKNVKNYDSSEKISPVNETEGPRYTELLEYVENNIETEVLEMFRDVKEGAEWTGDLAHQSLFYLWRKIKDISINASEISPAISADSVVQGHVHDKNGVSIYSEYPTGKVKQEEGNDEHLNVIKMAEFLPVGDNVLNIRDEISHNLSAVDADCKTIDTTRYEIDAPGTLVSFENVNKNPQEGTKLIKLENQSTDEEPTELVELRSQCIDEKPKKPTSPKPSTSNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00297470;
- 90% Identity
- iTF_00291456;
- 80% Identity
- -