Basic Information

Insect: Cephus rjabovi
Gene Symbol: -
Assembly: GCA_030264185.1
Location: JASCRG010000477.1:1282635-1284578[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.21 17 6.4 0.7 2 23 115 136 114 136 0.94

2 15 0.034 2.8 8.9 0.4 1 23 144 167 144 167 0.91

3 15 0.00045 0.036 14.8 1.4 1 22 173 194 173 197 0.90

4 15 2.4 2e+02 3.1 0.1 2 12 234 244 234 246 0.84

5 15 0.023 1.9 9.4 0.7 1 23 310 333 310 333 0.88

6 15 0.00015 0.012 16.4 1.6 1 23 339 361 339 361 0.97

7 15 0.0061 0.5 11.2 1.3 1 23 367 389 367 389 0.98

8 15 6.3e-06 0.00051 20.6 1.8 1 23 395 417 395 417 0.98

9 15 0.063 5.2 8.0 3.5 1 23 430 453 430 453 0.94

10 15 5.9e-05 0.0048 17.6 3.5 1 23 469 492 469 492 0.97

11 15 0.00053 0.043 14.6 1.3 1 23 500 523 500 523 0.97

12 15 0.00016 0.013 16.2 1.4 1 23 529 551 529 551 0.98

13 15 9.9e-05 0.0081 16.9 3.3 1 23 557 579 557 579 0.99

14 15 0.00018 0.015 16.0 2.4 1 23 585 608 585 608 0.96

15 15 0.25 20 6.2 0.2 3 23 616 636 614 636 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.21	17	6.4	0.7	2	23	115	136	114	136	0.94
2	15	0.034	2.8	8.9	0.4	1	23	144	167	144	167	0.91
3	15	0.00045	0.036	14.8	1.4	1	22	173	194	173	197	0.90
4	15	2.4	2e+02	3.1	0.1	2	12	234	244	234	246	0.84
5	15	0.023	1.9	9.4	0.7	1	23	310	333	310	333	0.88
6	15	0.00015	0.012	16.4	1.6	1	23	339	361	339	361	0.97
7	15	0.0061	0.5	11.2	1.3	1	23	367	389	367	389	0.98
8	15	6.3e-06	0.00051	20.6	1.8	1	23	395	417	395	417	0.98
9	15	0.063	5.2	8.0	3.5	1	23	430	453	430	453	0.94
10	15	5.9e-05	0.0048	17.6	3.5	1	23	469	492	469	492	0.97
11	15	0.00053	0.043	14.6	1.3	1	23	500	523	500	523	0.97
12	15	0.00016	0.013	16.2	1.4	1	23	529	551	529	551	0.98
13	15	9.9e-05	0.0081	16.9	3.3	1	23	557	579	557	579	0.99
14	15	0.00018	0.015	16.0	2.4	1	23	585	608	585	608	0.96
15	15	0.25	20	6.2	0.2	3	23	616	636	614	636	0.96

Sequence Information

Coding Sequence: atgaaaacaaagacaaaaaaggaTAAAGTTGATATGGAACCAAATATGGCAGATGACATAAAACCTGCTTATGAAGCAGATGACATAAAACCTGCTTATGAAGCAGATGACATAAAACCTGCTTATGAAGCAGATGATTGGTCATTAAATGTGAAACAAGAACCTATTGAAAATCTAACACCAACTAAATCATTATGTAGCAATAATGATTGGTTGGCTGACAAAGCTTGCAAAATAGAAGATGATTTAAGTGATTGTTTAGATCAATTCCAAGAAGTACCATTTAATCAGATCACCATAAAGTTATCAGAAAGTTATGGAGAGGAAACTAATTCCAAAATGACATGTACTCTCTGTGGGGCACGATACACttcacaattaaaatatgaatttcatatggAGAGACATAAATTTGGCAGAATTGATCTCTTCATTTGTCCACTGTGTCAAAGAAAATCCACAAGTGAGAACTTACTATGGGatcattatttctatattcacAAGAATACACAACGTTACATTTGTATGACTTGTGGTAAGCTATTTCCAAAACAATCGAAACTGAAAAATCACCAAGACAAGTATAACCATTCTGGTATAAACGAGATTCACATTGAAACTGATGAAAATGGTATAACTATTGATAATACAACTATTAGAAAAGCTATTGTCAAGGAGATACAAGGTATGCAGACAGGAAAATGTACATTATGTGGAAAAGAAGTTACAGACCTTGATCCTAATGCAATCAATGATGCTGTAACTTGCACCATGTGTGAAGGATCAGATCTTTCTTTAATGGTTGATTCAGATGGAACAAAAGTAATATCACGAAGACAATATCATTGTTCAAAATGCACAAAGCATTTTTTGCGAAAGGAAAGACTTGAATTTCACGAGATGAGACACAATGAGGACATGAGTAAACATATATGCAGTAGTTGTGGAAAGAAGTTCAGTGCTGAAAATGCCTTATATGAGCATTATATCTTTGTACACAAAGGTGCAAGACCCCATATTTGTGAACTATGTGGAAAATCCTTCCAACTAAAAGCACGCCTCAAAGAACATCTTCGAAGCCATACTGGAGAGCGACCCTATAAATGTGATGCATGTGATCAACGATGTATGACTGCAAAtgcattgaaaattcacaaaaaaatacattctgTTCATGAACGTTTTGTTTGTCAGATTTGTAACAAAACGTTCAGCAAAAAGCAGAATATGAATGAGCATTTAGAAAAGCATTGGAAATATGACAGGAAAATAGTATTACAACAGGCATTCAAATGTCGTATTTGTTCTGAGAAGTTTCCCACGTTTCGCAGTTTAAAATGTCACATGATAGAGACGCATGAAATTGATAGTCAAGATCCAATATTAATGGAGCAGAAACCTTGGTACAAATGCGAGCAGTGTAATGAGAAGTTTAAGCATCAAATGTCATTAAAAGTTCATAgggaaaaaattcatcaaggAAAAGTCaatccaatatttcattgtgaCGTATGTGATGctacttttaaaattaaacaactGTTAGCAAATCATATTAAAAGTAAACATGATGGTGAAAAACGTTACAAGTGCGCTCAATGTGGCAAGGGATTTAATGAGACAAAGTCTTTGCACAATCATATCTTACTGCATACTGGTAAGAAACCATACACGTGCGAGTATTGCGGAATAGCGTTTAGAAGGAAAGATTCACGAGATCAGCATCACAGGAAACATACTGGTGAGCAACCTTACAAATGTCAAGATTGTGATGAGACATTTTCTTCAACTAATAATCGATCAAAACATCGTAAACAAGTACATGAGAAGAGAGATTGTCAAATTTGTCCTGATTGTGGCGACGAATGCATTGGGCAGCAACAGATTCGTATTCACTTAAATATGCATCttggtgaaaaattaaaaaagcttGAAGAGTCGTGA
Protein Sequence: MKTKTKKDKVDMEPNMADDIKPAYEADDIKPAYEADDIKPAYEADDWSLNVKQEPIENLTPTKSLCSNNDWLADKACKIEDDLSDCLDQFQEVPFNQITIKLSESYGEETNSKMTCTLCGARYTSQLKYEFHMERHKFGRIDLFICPLCQRKSTSENLLWDHYFYIHKNTQRYICMTCGKLFPKQSKLKNHQDKYNHSGINEIHIETDENGITIDNTTIRKAIVKEIQGMQTGKCTLCGKEVTDLDPNAINDAVTCTMCEGSDLSLMVDSDGTKVISRRQYHCSKCTKHFLRKERLEFHEMRHNEDMSKHICSSCGKKFSAENALYEHYIFVHKGARPHICELCGKSFQLKARLKEHLRSHTGERPYKCDACDQRCMTANALKIHKKIHSVHERFVCQICNKTFSKKQNMNEHLEKHWKYDRKIVLQQAFKCRICSEKFPTFRSLKCHMIETHEIDSQDPILMEQKPWYKCEQCNEKFKHQMSLKVHREKIHQGKVNPIFHCDVCDATFKIKQLLANHIKSKHDGEKRYKCAQCGKGFNETKSLHNHILLHTGKKPYTCEYCGIAFRRKDSRDQHHRKHTGEQPYKCQDCDETFSSTNNRSKHRKQVHEKRDCQICPDCGDECIGQQQIRIHLNMHLGEKLKKLEES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01199615;
90% Identity: iTF_01474181;
80% Identity: -