Basic Information

Insect: Cephus pygmeus
Gene Symbol: ECU06_1150
Assembly: GCA_036026175.1
Location: JAYRBY010000330.1:751518-756546[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 3.1e-05 0.41 11.3 0.0 21 48 355 382 350 385 0.89

2 6 0.00028 3.6 8.3 0.1 22 49 497 524 489 529 0.89

3 6 0.00097 13 6.6 0.2 21 48 804 831 798 834 0.90

4 6 0.035 4.6e+02 1.6 0.0 16 41 856 881 848 888 0.79

5 6 0.0017 22 5.8 0.3 21 49 917 944 912 948 0.85

6 6 0.0021 27 5.5 0.1 22 52 946 976 940 978 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	3.1e-05	0.41	11.3	0.0	21	48	355	382	350	385	0.89
2	6	0.00028	3.6	8.3	0.1	22	49	497	524	489	529	0.89
3	6	0.00097	13	6.6	0.2	21	48	804	831	798	834	0.90
4	6	0.035	4.6e+02	1.6	0.0	16	41	856	881	848	888	0.79
5	6	0.0017	22	5.8	0.3	21	49	917	944	912	948	0.85
6	6	0.0021	27	5.5	0.1	22	52	946	976	940	978	0.91

Sequence Information

Coding Sequence: ATGAGTGGCGTTCCTCAAGAATATGAGATGGAGGTTGGAACATCAGTTGATTTGGAGGCTTGTGAAGATGAATCTATACTGATACAAACTGTAAAGAATATAGTTcaagagaatgaagaaaatgaagaaactcCGGAGGAATATTTTGTGGTGACAAATATCCAGAATGACCAGAATGGTGAAATAGAAGTTACTAATACAAAAGTGATTGATACAATTAGCCACCCTGAAGAGAATTCAAATTGGATGGATATGTGCAGAGTTTGTGCTAATTTAAATGACCATCTAATCCCTATTTTTGAGGGAGAGGGTGCTGAGCATGAGCTATGtaacaaaattcataaataccTCCCTATTCATgtATCTGAAACTGATAATTTGCCACTCCAGCTGTGTTACCACTGTGCAGCAACACTTTTAGCATGGCACGAATTGGCTGAAGGATGCCTGGATGCTGAACGTCGTCTTCTTCAAATGCAAGAAGAATTTCAACATAAACAACAGccaCATGATGAGCAGCAGAATCATATGAAAGGAGATTTGAATGAGGAGACAATTGTCAATGATACTGAAAGGTCCAGTAGAGTCCAGACACCATTTAAAGTATTCCTTGACACGcagaatatattttggaaGCCGTACAAAAGCCCAAATCAACCACATGATAGAAAACTCATGATGAGAAGGGATACAGACTCGGCTTGGATAACCGTTGTGGACGCGACCCTTCACCAGGCTCCAATGATGTCTGACCCACTGGCTAGTAATGATTCTGAAATTAAACAAGATAAGTCCAATGTATCGAAAGAAGGTATCAGCAAGGGATACAGTAAATTTTACACGCATACGATAGCCGTAGAGAATAATTTGAATGAGGAGCAGGAGAGAACAAGGACTAAATGTGAAACATGCTCACAAGAGTTTGATCTGGCCGGAGACTTACAAGAGCATAGTAAAGTACACAAAGTTTTAACCGACATACAAGAATCTTATCAATGTCTAGAATGCGGAAAGtgttttaaactaaaagaCTCATATCTAAGGCACATGAGAATACATACAGACGAGCGACCTTTTACCTGTCACATTTGTGGAAAACAGTTTCGCGACTCTGGCGGTTTATCCAGACATCTAAAAGATGTGCACGCTAAAGTGAAAAACTTTTCCTGCGATATTTGCGGCAGGTCGTTTGCCTCCAAGGCTACCAGGGATGATCACCGTCGCACTCACACAGGAGAACGACCATACATCTGCGACTCATGCGGCAAGACATTCAAATCAAAAGCGTCTCTCTATATACACAGCAAACTGCATACAGATGAATTTCCACACCTGTGTTCCTActgtaataagaaatttcgtCGAAGACAAGAGATGCTGGCACATGTCACCACTCATACCGGCGAGAAGAATTACGGATGTGACGAATGCTCAAAACGATTCCGTGTCAAATCGGAACTCGTCAGACATAAACTTATTCATTCCGAGGACAAACCATTTGTGTGCACAAAGTGCGGTCTCGCATTTCGTCAGAAGCGCTATCTCAACAATCACATTAAGAGCAGACATATCGAATCGTTTGGCGCCCCAAGGAAGAAATCCTTTGCGGCATACCGTTCAGCTCAAACGGCACTTTTATCCAGAAATAGTCCCGCACAATTGAATCGAAAATGCGCGGATCCTGGAGAGCAGGAAGTGACTGATCCCTTAGCGCAAACCGGAGAGTCTGACGAAGTTAAATTAGAAGTGCTGACATACGACGAGAGTAGTCTGAATTCGGTGGATGGAAGCACCGATTCAGAGTACCAACCGGAAAGTACAGGAACGCATATCCAAAGAAGAAATCCTACTCGGACAATTGCACGAAATTCTGTGATATCCAACGAACATGTCTCGAAAGAAGCTAAGACGATGCACCCTTGTGAAAAATGTGAACGAGTTTTCAAAAGGGAATTTCATTATAAGCGGCACTTGGCAAAGTGCCGCGAGAAATTCGTGACAAGAAGCGACAGCGAGGACTGCATTGAAAGTATTAATGCGGAATCTTCACAAAAGACCAAGCTCATTGAAATCGAGGAACCTAATGTTACTGAAGAAGAAAGTGAAACTGATGACAAGAGTGTTGATTGGGAAGCATGCAATAAGTCTAGAAGAAGGAGACTTCAGTCATATCCTTGCATGCATTGTGATTATAcggctaagaaaaaaaagttactcgAATTACACAATATGGAATACCACCCAGAGTTGTCTATTAAGAAGCAAAGTAAAAAGCCCAGAAGCATAGACAAAGACACTGTAAAACGTGCAAGAATGGAAGTGAATGGAAGAGTTTATTATCATTGTAACGAATGTggtaaaaatctttattcccCTTATACATTTTCTTGGCATATGAGAATTCACACTGGTGAACGTCCCTTTACTTGTCATCTTTGCGGAAAACAATTCCGTGTCAACCAGGGGTTGGCAAGACATCTACGCGAGACTCATGCGGGTATCAAGAAGTTTCCTTGTGACATTTGCGGTCGTATGTTTTCTACAAAACGTAACGCTGAGGATCACAGACGAATACATACTGGCGAGAGACCATACGTCTGCAATATATGTGGAAAAGCATTTAAACAAAAGGCTTCGCTGTTTGTGCATAATCGCACGCATACTGACTTCTTTCCATTCAAATGTAGCTATTGCGATCAAGGTTTTCGTACCAGACCACCTCTAATGGTGCATATCACTAAGCACACTGGCGAGAAACCCCATGCTTGTGACATATGTGGTCGCCGGTTCCGCATAAAATATGAACTAAAGCGACATCGACTGATACACTTTGATGAGAAACCTTGGCAATGTACAGACTGTGGGCTCTCTTTCCGCCAAAAGCGTTATTTAgttaatcataaaaaattgaatcacaACACAATTCCTTCATTGCCTACGCACGAGTAA
Protein Sequence: MSGVPQEYEMEVGTSVDLEACEDESILIQTVKNIVQENEENEETPEEYFVVTNIQNDQNGEIEVTNTKVIDTISHPEENSNWMDMCRVCANLNDHLIPIFEGEGAEHELCNKIHKYLPIHVSETDNLPLQLCYHCAATLLAWHELAEGCLDAERRLLQMQEEFQHKQQPHDEQQNHMKGDLNEETIVNDTERSSRVQTPFKVFLDTQNIFWKPYKSPNQPHDRKLMMRRDTDSAWITVVDATLHQAPMMSDPLASNDSEIKQDKSNVSKEGISKGYSKFYTHTIAVENNLNEEQERTRTKCETCSQEFDLAGDLQEHSKVHKVLTDIQESYQCLECGKCFKLKDSYLRHMRIHTDERPFTCHICGKQFRDSGGLSRHLKDVHAKVKNFSCDICGRSFASKATRDDHRRTHTGERPYICDSCGKTFKSKASLYIHSKLHTDEFPHLCSYCNKKFRRRQEMLAHVTTHTGEKNYGCDECSKRFRVKSELVRHKLIHSEDKPFVCTKCGLAFRQKRYLNNHIKSRHIESFGAPRKKSFAAYRSAQTALLSRNSPAQLNRKCADPGEQEVTDPLAQTGESDEVKLEVLTYDESSLNSVDGSTDSEYQPESTGTHIQRRNPTRTIARNSVISNEHVSKEAKTMHPCEKCERVFKREFHYKRHLAKCREKFVTRSDSEDCIESINAESSQKTKLIEIEEPNVTEEESETDDKSVDWEACNKSRRRRLQSYPCMHCDYTAKKKKLLELHNMEYHPELSIKKQSKKPRSIDKDTVKRARMEVNGRVYYHCNECGKNLYSPYTFSWHMRIHTGERPFTCHLCGKQFRVNQGLARHLRETHAGIKKFPCDICGRMFSTKRNAEDHRRIHTGERPYVCNICGKAFKQKASLFVHNRTHTDFFPFKCSYCDQGFRTRPPLMVHITKHTGEKPHACDICGRRFRIKYELKRHRLIHFDEKPWQCTDCGLSFRQKRYLVNHKKLNHNTIPSLPTHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01473345;
90% Identity: iTF_01473345;
80% Identity: iTF_00296194;