Basic Information

Insect: Cephus pulcher
Gene Symbol: -
Assembly: GCA_030142455.1
Location: JARQTB010000486.1:1265709-1267592[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.19 15 6.5 0.7 2 23 95 116 94 116 0.94

2 15 0.031 2.4 8.9 0.4 1 23 124 147 124 147 0.91

3 15 0.00041 0.032 14.9 1.4 1 22 153 174 153 177 0.90

4 15 2.2 1.7e+02 3.1 0.1 2 12 214 224 214 226 0.84

5 15 0.021 1.6 9.5 0.7 1 23 290 313 290 313 0.88

6 15 0.00013 0.01 16.4 1.6 1 23 319 341 319 341 0.97

7 15 0.0056 0.44 11.3 1.3 1 23 347 369 347 369 0.98

8 15 5.7e-06 0.00045 20.7 1.8 1 23 375 397 375 397 0.98

9 15 0.058 4.5 8.1 3.5 1 23 410 433 410 433 0.94

10 15 5.4e-05 0.0042 17.6 3.5 1 23 449 472 449 472 0.97

11 15 0.00048 0.038 14.6 1.3 1 23 480 503 480 503 0.97

12 15 0.00014 0.011 16.3 1.4 1 23 509 531 509 531 0.98

13 15 9e-05 0.0071 16.9 3.3 1 23 537 559 537 559 0.99

14 15 0.00017 0.013 16.1 2.4 1 23 565 588 565 588 0.96

15 15 0.23 18 6.2 0.2 3 23 596 616 594 616 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.19	15	6.5	0.7	2	23	95	116	94	116	0.94
2	15	0.031	2.4	8.9	0.4	1	23	124	147	124	147	0.91
3	15	0.00041	0.032	14.9	1.4	1	22	153	174	153	177	0.90
4	15	2.2	1.7e+02	3.1	0.1	2	12	214	224	214	226	0.84
5	15	0.021	1.6	9.5	0.7	1	23	290	313	290	313	0.88
6	15	0.00013	0.01	16.4	1.6	1	23	319	341	319	341	0.97
7	15	0.0056	0.44	11.3	1.3	1	23	347	369	347	369	0.98
8	15	5.7e-06	0.00045	20.7	1.8	1	23	375	397	375	397	0.98
9	15	0.058	4.5	8.1	3.5	1	23	410	433	410	433	0.94
10	15	5.4e-05	0.0042	17.6	3.5	1	23	449	472	449	472	0.97
11	15	0.00048	0.038	14.6	1.3	1	23	480	503	480	503	0.97
12	15	0.00014	0.011	16.3	1.4	1	23	509	531	509	531	0.98
13	15	9e-05	0.0071	16.9	3.3	1	23	537	559	537	559	0.99
14	15	0.00017	0.013	16.1	2.4	1	23	565	588	565	588	0.96
15	15	0.23	18	6.2	0.2	3	23	596	616	594	616	0.96

Sequence Information

Coding Sequence: atgaaaacaaagacaaaaaaggATAAAGTTAATATGGAACCAAATATGGCAGATGACATAAAACCTGAGGCAGATGATTGGTCATTAAATGTGAAACAAGAACCTATTGAAAAGCTAACACCAACTAAATCATTATGTAGCAATAATGATTGGTTGGCTGACAAACCTTGCAAAATAGAAGATGATTTAAGTGATTGTTTAGATCAATTCCAAGAAGTACCGTTTAATCACATCACCATAAAGTTATCAGAAAGTTATGGAGAGGAAACTAATTCTAAAATGACATGTACTCTTTGTGGGGCACGATACACTtcacaattaaaatatgaatttcatatggAGAGACATAAATTTGGCAGAATTGATCTCTTCATCTGTCCATTGTGTCAAAGAAAATCCACAAGTGAGAACTTACTATGGGatcattatttctatattcacAAGAATACACAACGTTACATTTGTATGACTTGTGGTAAGCTATTTCCAAAACAATCGAAACTGAAAAATCACCAAGACAAGTATAACCATTCTGGTATAAACGAGATTCACATTGAAACTGATGAAAATGGTATAACTATTGATAATACAACTATTAGAAAAGCTATTGTCAAAGAGATACAAGGTATGCAGACAGGAAAATGTACATTATGTGGAAAAGAAGTTACAGACCTTGATCCTAATGCAATCAATGATGCTATAACTTGCACCATGTGTGAAGGATCAGACCTTTCTTTAATGGTTGATTCAGATGGAACAAAAGTAATATCACGAAGACAATATCATTGTTCAAAATGCACAAAGCATTTTTTGCGAAAGGAAAGACTTGAATTTCACGAGATGAGACACAATGAGGACATGAGTAAACATATATGCAGTAGTTGTGGAAAGAAGTTCAGTGCTGAGAATGCCTTATATGAGCATTATATCTTTGTACACAAAGGTGCAAGACCCCATATTTGTGAACTATGTGGAAAATCCTTCCAACTAAAAGCACGCCTCAAAGAACATCTTCGAAGCCATACTGGAGAGCGACCCTATAAATGTGATGCATGTGATCAACGATGTATGACTGCAAAtgcattgaaaattcacaaaaaaatacattctgTTCATGAACGTTTTGTTTGTCAGATTTGTAACAAAACGTTCAGCAAAAAGCAGAATATGAATGAGCATTTAGAAAAGCATTGGAAATATGAcagaaaaatagtattacaACAGGCATTCAAATGTCGTATTTGTTCTGAGAAGTTTCCCACGTTTCGCAGTTTAAAATGTCACATGATAGAGACGCATGAAATTGATAGTCAAGATCCAATATTAATGGAACAGAAACCTTGGTACAAATGCGAGCAGTGTAATGAGAAGTTTAAGCATCAAATGTCATTAAAAGTTCATAGGGAAAAAATTCATCTAGGAAAAGTCaatccaatatttcattgtgaCGTATGTGATGctacttttaaaattaaacaactGTTAGCAAATCATATTAAAAGTAAACATGATGGTGAAAAACGTTACAAGTGCGCTCAATGTGGCAAGGGATTTAATGAGACAAAGTCTTTGCACAATCATATCTTACTGCATACTGGTAAGAAACCATACACGTGCGAGTATTGCGGAATAGCGTTTAGAAGGAAAGATTCACGAGATCAGCATCACAGGAAACATACTGGTGAGCAACCTTACAAATGTCAAGATTGTGATGAGACATTTTCTTCAACTAATAATCGATCAAAACATCGTAAACAAGTACATGAGAAGAGAGATTGTCAAATTTGTCCTGATTGTGGCGACGAATGCATTGGGCAGCAACAGATTCGTATTCACTTAAATATGCATCttggtgaaaaattaaaaaagcttGAAGAGTCGTGA
Protein Sequence: MKTKTKKDKVNMEPNMADDIKPEADDWSLNVKQEPIEKLTPTKSLCSNNDWLADKPCKIEDDLSDCLDQFQEVPFNHITIKLSESYGEETNSKMTCTLCGARYTSQLKYEFHMERHKFGRIDLFICPLCQRKSTSENLLWDHYFYIHKNTQRYICMTCGKLFPKQSKLKNHQDKYNHSGINEIHIETDENGITIDNTTIRKAIVKEIQGMQTGKCTLCGKEVTDLDPNAINDAITCTMCEGSDLSLMVDSDGTKVISRRQYHCSKCTKHFLRKERLEFHEMRHNEDMSKHICSSCGKKFSAENALYEHYIFVHKGARPHICELCGKSFQLKARLKEHLRSHTGERPYKCDACDQRCMTANALKIHKKIHSVHERFVCQICNKTFSKKQNMNEHLEKHWKYDRKIVLQQAFKCRICSEKFPTFRSLKCHMIETHEIDSQDPILMEQKPWYKCEQCNEKFKHQMSLKVHREKIHLGKVNPIFHCDVCDATFKIKQLLANHIKSKHDGEKRYKCAQCGKGFNETKSLHNHILLHTGKKPYTCEYCGIAFRRKDSRDQHHRKHTGEQPYKCQDCDETFSSTNNRSKHRKQVHEKRDCQICPDCGDECIGQQQIRIHLNMHLGEKLKKLEES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01199615;
90% Identity: iTF_01474181;
80% Identity: -