Basic Information

Insect: Cephus parvus
Gene Symbol: -
Assembly: GCA_030142435.1
Location: JARQTA010000513.1:1301191-1303077[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.2 17 6.5 0.7 2 23 96 117 95 117 0.94

2 15 0.033 2.7 8.9 0.4 1 23 125 148 125 148 0.91

3 15 0.00044 0.036 14.9 1.4 1 22 154 175 154 178 0.90

4 15 2.4 2e+02 3.1 0.1 2 12 215 225 215 227 0.84

5 15 0.022 1.8 9.5 0.7 1 23 291 314 291 314 0.88

6 15 0.00014 0.012 16.4 1.6 1 23 320 342 320 342 0.97

7 15 0.006 0.5 11.3 1.3 1 23 348 370 348 370 0.98

8 15 6.2e-06 0.00051 20.7 1.8 1 23 376 398 376 398 0.98

9 15 0.062 5.1 8.1 3.5 1 23 411 434 411 434 0.94

10 15 5.8e-05 0.0048 17.6 3.5 1 23 450 473 450 473 0.97

11 15 0.00052 0.043 14.6 1.3 1 23 481 504 481 504 0.97

12 15 0.00016 0.013 16.3 1.4 1 23 510 532 510 532 0.98

13 15 9.7e-05 0.008 16.9 3.3 1 23 538 560 538 560 0.99

14 15 0.00018 0.015 16.1 2.4 1 23 566 589 566 589 0.96

15 15 0.24 20 6.2 0.2 3 23 597 617 595 617 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.2	17	6.5	0.7	2	23	96	117	95	117	0.94
2	15	0.033	2.7	8.9	0.4	1	23	125	148	125	148	0.91
3	15	0.00044	0.036	14.9	1.4	1	22	154	175	154	178	0.90
4	15	2.4	2e+02	3.1	0.1	2	12	215	225	215	227	0.84
5	15	0.022	1.8	9.5	0.7	1	23	291	314	291	314	0.88
6	15	0.00014	0.012	16.4	1.6	1	23	320	342	320	342	0.97
7	15	0.006	0.5	11.3	1.3	1	23	348	370	348	370	0.98
8	15	6.2e-06	0.00051	20.7	1.8	1	23	376	398	376	398	0.98
9	15	0.062	5.1	8.1	3.5	1	23	411	434	411	434	0.94
10	15	5.8e-05	0.0048	17.6	3.5	1	23	450	473	450	473	0.97
11	15	0.00052	0.043	14.6	1.3	1	23	481	504	481	504	0.97
12	15	0.00016	0.013	16.3	1.4	1	23	510	532	510	532	0.98
13	15	9.7e-05	0.008	16.9	3.3	1	23	538	560	538	560	0.99
14	15	0.00018	0.015	16.1	2.4	1	23	566	589	566	589	0.96
15	15	0.24	20	6.2	0.2	3	23	597	617	595	617	0.96

Sequence Information

Coding Sequence: atgaaaaCAAAGATAAAGGATAAAGTTGATATAGAACCAAATATGGCAGATGACATAAAACCTGCTTATGAGGCAAATGATTGGTCATTAAATGTGAAACAAGATCCTATTGAAAAGCTAACACCAACTAAATCATTATGTAGCAATAATGATTGGTTGGCTGACAAAGCTTGCAAAATAGAAGATGATTTAAGTGATTGTTTAGATCAATTCCAAGAAGTACCGTTTGATCAGATCACCATAAAGTTATCAGAAAGTTATGGAGaggaaaataattctaaaatgaCATGTACTCTTTGCGGGGCACGATACACTTCAcaattaaaatacgaatttcatATGGAGAGACATAAATTTGGCAGAATTGATCTCTTCATCTGTCCATTGTGTCAAAGAAAATCTACAAGTGAGAACTTACTATGGGatcattatttctatatccacAAGAATACACAACGTTACATTTGTATGACTTGTGGTAAGCTATTTCCAAAAcaatcgaaattgaaaaatcaccaAGACAAATATAACCATTCTGGTGTAAGCGAGATTCACATTGAAACTGATGAAAATGGTATAACTATTGACAATACAACTATTAGAAAAGCTATTGTCAAAGAGATACAAGGTATGCAAACAGGAAAATGTACATTATGTGGAAAGGAAGTTACAGACCTTGATCCTAATGCAATCAATGATGCTATAACTTGCACTATGTGTGAAGGATCAGATCTTTCTTTAATGGTTGATTCAGAtggaataaaagtaatatcacGAAGACAGTATCATTGTTCAAAATGCACAAAGCATTTTTTGCGAAAGGAAAGACTTGAATTTCACGAGATGAGACACAATGAGGACATGAGTAAACATATATGCAGTAGTTGTGGAAAGAAGTTCAGTGCTGAGAATGCCTTATATGAGCATTATATCTTTGTACACAAAGGTGCGAGACCCCATATTTGTGAACTATGTGGAAAATCCTTCCAACTAAAAGCACGCCTTAAAGAACATCTTCGAAGCCATACTGGAGAGCGACCCTATAAATGTGATGCATGTGATCAACGATGTATGACTGCAAatgcattgaaaattcacaaaaaaatacattctgtTCATGATCGTTTTGTTTGTCAGATTTGTAACAAAACGTTTAGCAAAAAGCAGAATATGAATGAGCATTTAGAAAAGCATTGGAAATATGACAGGAAAATAGTGTTACAACAGGCATTCAAATGTCGTATTTGTTCTGAGAAGTTTCCCACGTTTCGCAGTTTAAAATGTCACATGATAGAGACGCATAAAATTGATAGTCAAGATCCAATATTAATGGAGCAGAAACCTTGGTACAAATGCGAGCAGTGTAATGAGAAGTTTAAGCATCAAATGTCATTAAAAGTTCATAgggaaaaaattcatcaaggAAAAGTCAATCCAATATTTCATTGTGACGTATGTGATGctacttttaaaattaaacaactGTTAGCAAACCATATTAAAAGTAAACATGATGGTGAAAAACGTTACAAGTGCGCTCAATGTGGCAAGGGATTTAATGAGACAAAGTCTTTGCACAATCATATCTTACTGCATACTGGTAAGAAACCATACACGTGCGAGTATTGCGGAATAGCGTTTAGAAGAAAAGATTCACGAGATCAGCATCACAGGAAACATACTGGTGAGCAACCGTACAAATGTCAAGATTGTGATGAGACATTTTCTTCAACTAATAATCGATCAAAACATCGTAAACAAGTACATGAGAAGAGAGATTGTCAAATTTGTCCTGATTGTGGCGACGAATGCATTGGGCAGCAACAGATTCGCATTCATTTAAATATGCATCttggtgaaaaattaaaaaagcttGAAGAGTCGTGA
Protein Sequence: MKTKIKDKVDIEPNMADDIKPAYEANDWSLNVKQDPIEKLTPTKSLCSNNDWLADKACKIEDDLSDCLDQFQEVPFDQITIKLSESYGEENNSKMTCTLCGARYTSQLKYEFHMERHKFGRIDLFICPLCQRKSTSENLLWDHYFYIHKNTQRYICMTCGKLFPKQSKLKNHQDKYNHSGVSEIHIETDENGITIDNTTIRKAIVKEIQGMQTGKCTLCGKEVTDLDPNAINDAITCTMCEGSDLSLMVDSDGIKVISRRQYHCSKCTKHFLRKERLEFHEMRHNEDMSKHICSSCGKKFSAENALYEHYIFVHKGARPHICELCGKSFQLKARLKEHLRSHTGERPYKCDACDQRCMTANALKIHKKIHSVHDRFVCQICNKTFSKKQNMNEHLEKHWKYDRKIVLQQAFKCRICSEKFPTFRSLKCHMIETHKIDSQDPILMEQKPWYKCEQCNEKFKHQMSLKVHREKIHQGKVNPIFHCDVCDATFKIKQLLANHIKSKHDGEKRYKCAQCGKGFNETKSLHNHILLHTGKKPYTCEYCGIAFRRKDSRDQHHRKHTGEQPYKCQDCDETFSSTNNRSKHRKQVHEKRDCQICPDCGDECIGQQQIRIHLNMHLGEKLKKLEES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01199615;
90% Identity: iTF_01474181;
80% Identity: -