Cpar006424.1
Basic Information
- Insect
- Cephus parvus
- Gene Symbol
- -
- Assembly
- GCA_030142435.1
- Location
- JARQTA010000487.1:216061-216480[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6e-08 6.8e-05 22.8 0.0 1 34 14 46 14 54 0.90 2 2 2.7 3.1e+03 -1.7 0.0 28 37 87 97 85 104 0.71
Sequence Information
- Coding Sequence
- AtgacaaaaagtaaaaaggaatCAAAGCGAAAGAGGTACACTGAGGAAACATTGAAAGCAGCTGTAGCTGCTGTGTGGATTGGACGAGGACTTCAAGCTGTCAGTGTGGAGTTCGGCATCCCAAAGACTACCCTCTTCGACAAACTGAAAGATTCTGCTCCAGTAATTAAAACAGGAGGACCAGCGACAGTGCTATCCGATGAGGAAGAGCAACAACTTGTTAAGTGGATCATGTACATGAGTGTGTGTGGCTTTCCTGTGACGAAAAGCACACTCGTAAGCAGTGTAACGAGTCTTATTAAGCAGCTAAAATGTGAAAATCCCCTGAAGAATAATTGTCCAGGCCGCAGTTGGTATGAGGGATTTCTCAAACGTCATCCAGAGTTAGCTTGTAGGATTGCACAAAATTTGTCATACTAA
- Protein Sequence
- MTKSKKESKRKRYTEETLKAAVAAVWIGRGLQAVSVEFGIPKTTLFDKLKDSAPVIKTGGPATVLSDEEEQQLVKWIMYMSVCGFPVTKSTLVSSVTSLIKQLKCENPLKNNCPGRSWYEGFLKRHPELACRIAQNLSY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01473100; iTF_00295933;
- 90% Identity
- iTF_00295933;
- 80% Identity
- -