Cnig004537.3


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cephus nigrinus
Gene Symbol
Mblk-1
Assembly
GCA_030142395.1
Location
JARQSZ010000398.1:697118-706222[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.8e-18 8.2e-15 54.5 0.1 1 45 393 438 393 438 0.96
2 2 1.8e-18 2.5e-15 56.1 0.0 1 43 790 833 790 835 0.95

Sequence Information

Coding Sequence
ATGATAAGTAGTAGGAGCAGGGCAGGAGGGGGTTTGGAACGGGTAGCGGAAGAGTTGATGGGCCGTAGGAGATGGAAGCAATACCAGGACACCCTGTACAGCAGCACTCGGAGCGAATCAGCAACGCAACCTCACCGGCTCTACCCGGCGTCCTCGTGCAACCCCGGCTCGAACCAAGGTCACCGTCAGATATCGGGGCCGCTGACGGTGAAGCAAGAGCCGCGGCTTCCGAATCACGTCGACGAGGAGCCACGGTGTCTCAGGTCGGAGGAGATCAAGGTCGAGGTCGAGGTCGAGGCTGCGGAGGTGACACGGGACCAGGTCCTGGaggaggacgacgaggaggaggagaagaagcTCAAGCTCGCCGAGGACGCGGACCGATCGGTCAGCCCTCTCAGGGAGGTGGACCGTCATCCGTCCCAAGAGAGGGATCCGGTCAACGTCACGGACACGGAAGGGACCAAGGAACGGATAGAGAAGGTCGCGTTGGAGCGGACACCAGTGACGCAGGGCTTACTGAGGgtgaagaaggaggaggagctCCAGGAGGCACCGAGCTCTGCAGTCTGTTTAGTGACAGGAGAGACGGAATTGAGCAGGTCAGGGGTCAAGGAGGTGGACAACACGCCGGAGAGCATCGTCGGCGCTTTACCATTCCTCGGAAGCAGACGAGCGAGTCCGCCACCCGAGGATTGGAAACCCCTGGACAAATGTTACTTCTGTCTCGATGGCAAGCTGCCACACGACGACCAGCCGCCCCTTAGCCCTCAGAGTGACAGTAGCAGCAGTTCACGATCGGCCGAGTCCCCGATGTCGGTCCAAGTCGACCCCATGGCAGCATCCGTGGTGGCAGCAGCCCTTAGCGGCACCTACCCCACCTTACTGCCTCAATGGTGTCTACCCCCGAGGGAAGCACCCCTCGTGGGTATCCCGACACATCAAGAAAGTGCCCCGGCAGTTGATCAGCCTCTCGACCTCTCGGCTAAACCTAAAAACTCTCagGACAACAACATATCCCTAttggaacaacaaaaaatacctCTCAGGATGCCGGCAGGCATCGATCCTAAGAGCATCTTCAACTCATGCTACCGTGCGAAACCACGGTTGACCGGTCCAGCCGGAGTTGGCGGGGTCCCCGTGGTGGGTGCTGCTGGTGGCCGTAGGACCTACACCGAGGAGGAACTGCAAGCCGCCCTCAGGGACATTCAAAGCGGCAAGCTGGGCACTCGCAGGGCTGCAGTTATTTACGGGATACCTAGGAGCACTCTGAGGAACAAGGTCTACAAGCTCGCGATGGAACGCGAAAGGGACGCTTCCCTGACTAGCACCCATTCACACCCTCACGAGCCTGGCGTCCCAGCCACACCAAATACGACCCAAAACGCCTCCGCAACCAGTCCGCCCCCGCAAGTGGATGAGGTGGACGATAAGGAGCTCTCTGGGGcggaagaggagaaggaagtTGAGAAGGCGTTACTGAAGCCCCTACTGTCGTTAGAGGACCTTGTGAGGTTCTCAGCCCTGGAGGGTAGCGGTGGTGATTCCCTGAGGACGTTGCTACAGCGTGGCCAGGAAACGGGTACCGAGTGGCCGGGATTCGAACATGCAAATATCGGTCCATACATTCAGAAGATGCTGGCAGTTGCAGGACCTTTCAAAGgaggTATGGAAACGCAGGACTATCGGATCCCCGAGGTGATGCGAAGGCTCATGAGCGAGgataagaaattgaataagGATGTGAATGGCGATCAGCATCAGCCACAGAGCCAGGTCCATTCGCAGCAACAGTCCCAGCAGCAAACGCAATCACAAGTGACGCACCAACAGGCACAGCAAGTGCGCGGACCCATCACGAACGATGATTTTAATCCCAGTATAGAAGAAGAGGCGAGCGACAGTGCTCAGAGTAGAGCGATACTGAAAATTCCGTCCTACAAACCGGCAAGTACGCCGGGATCGAGCAAAAACGGCGAGCCAACCTCAGCGGCGTTCGCGCAGAGCTTCGCCGCGACCGCTAGCAGTGCCGCCGGAAGTCCAGGTCTCTTGGAGCGCGTCAGTCCCGCCTATTCCGGCACTAGCAGTCCCACGAATTCCCTGGTGGGCAAGGGTGTCGGGGTGAACTTCCGGGACGTCATTGCTAAAAGTATTAGCGTTAAATTCCAGGAAGGTCAGGGAGGCCTGTCACAGGGTGTCGTGCAGACGCCTATGATGGTCGACCCGAATCCCTTCAAAAGAGGAAGGTACACGCCTCCTCAACCACCTCAGTCACAACCACCGAAACCAACTCAGGATAACAAACCGAAACCCGGGACTGGTGGTAAAGGCACAAGGCCCAAACGTGGCAAGTATCGGAATTACGATCGCGACAGTCTCGTCGAGGCTGTGCGAGCCGTTCAGCGTGGTGAAATGAGTGTTCATCGTGCGGGAAGTTATTATGGAGTACCACATTCCACTTTGGAGTACAAAGTCAAGGAAAGACATTTAATGAGACCGCGAAAGAGGGACCAGAAACAACCGGACGATAAAGCCAAGGAGGCAGCAACCGCAGCGGCTATGAGGCAAGCCGGACCCGATAAGAAGCCTCAGCTCAAGCCTCAGAAGCCATTCACACCTCCGGGACCTATACCAGGGCCAAACGGTCTTAAAATGCCACCCTTCATGGATGGTATGCCTCACCTACCGTTCGCTCATCCCTTCAACTTCTGGGGCCCAACGCCTTTCATAGGCTCGCCATTTATGACCGGTGCACCGAATGTCCCGACTATGCTACCGGAACAGTACTTCGCGACGCAGAGGATGCGCGGTCTGCAGGAGCAGCAGAGGAACGCGATAGTACAGCAACAAAGGGATAGGGAAGGGATGAACGTGGCTGCGGAACCGGGAACGTCGAATCAACGAGGCTCTGGTATGGGGAAATCAACACGCGAGATAGCAGAGAGCCTGTATGACGGAACGGGAGCTAATGGTAGTTTCCTGGACAACCTGATCAGGTCCAGTCTCGAGACGGGAATACCCCGGGACCAGCGAGCTATCACCGAAGCCAGAaatcaacagcagcaacaacagcagcagcagcagcaacctCAGCAACCACACCACCCCGAGGCCATGAGCAGCAAGGCCTTGATAGATCAGCTCTGCCGTAACTCCAGGAGGACGCCGCTACCCAGGATGCCTCAGGATAGCAGCGAGGACGAGAGCTATCGGACACCCGGTCGAGTTCTCCCCGAGAGACCCGAGAGGGTACCCACAGTCGATCTCAGCCCGTCACCCTCGGAACGTGGACGCGCCGACGATGGAAGTGATCGTCTAACCTCACCGCCCACGCCACTCTCGGTTTCCAGAGCAGGAAGCAGGGACGAGGAAACGAGGGATTCCTTGAGGATCGACCGTAGTAGCCGGGAACGTGAGGTCCATAACGGTCAGGAGGACCGGGATCGGGAAAGAAAGACTTTGACCTTGCAGCAACAGCTGAATCACTACCCGGACTTACACAACCTCTATGCCGTATCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAGCAGccgcagcaacagcaacaacaacaacagcagcagcagcaacaacaacagcaaaagGATTACTCGGCCATGAGTGGCCTGGTGGTGCAATTGCAGAGGGGCTACAACACCGGAACAAGCAGGTCCGGTGAGCAGTCGCAGAACAGCCAGCAGCCACAAGATCGCGGCGCTGTGCTCAACATGGAAGACTCCGTAGAGCAGTAG
Protein Sequence
MISSRSRAGGGLERVAEELMGRRRWKQYQDTLYSSTRSESATQPHRLYPASSCNPGSNQGHRQISGPLTVKQEPRLPNHVDEEPRCLRSEEIKVEVEVEAAEVTRDQVLEEDDEEEEKKLKLAEDADRSVSPLREVDRHPSQERDPVNVTDTEGTKERIEKVALERTPVTQGLLRVKKEEELQEAPSSAVCLVTGETELSRSGVKEVDNTPESIVGALPFLGSRRASPPPEDWKPLDKCYFCLDGKLPHDDQPPLSPQSDSSSSSRSAESPMSVQVDPMAASVVAAALSGTYPTLLPQWCLPPREAPLVGIPTHQESAPAVDQPLDLSAKPKNSQDNNISLLEQQKIPLRMPAGIDPKSIFNSCYRAKPRLTGPAGVGGVPVVGAAGGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLTSTHSHPHEPGVPATPNTTQNASATSPPPQVDEVDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSALEGSGGDSLRTLLQRGQETGTEWPGFEHANIGPYIQKMLAVAGPFKGGMETQDYRIPEVMRRLMSEDKKLNKDVNGDQHQPQSQVHSQQQSQQQTQSQVTHQQAQQVRGPITNDDFNPSIEEEASDSAQSRAILKIPSYKPASTPGSSKNGEPTSAAFAQSFAATASSAAGSPGLLERVSPAYSGTSSPTNSLVGKGVGVNFRDVIAKSISVKFQEGQGGLSQGVVQTPMMVDPNPFKRGRYTPPQPPQSQPPKPTQDNKPKPGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKAKEAATAAAMRQAGPDKKPQLKPQKPFTPPGPIPGPNGLKMPPFMDGMPHLPFAHPFNFWGPTPFIGSPFMTGAPNVPTMLPEQYFATQRMRGLQEQQRNAIVQQQRDREGMNVAAEPGTSNQRGSGMGKSTREIAESLYDGTGANGSFLDNLIRSSLETGIPRDQRAITEARNQQQQQQQQQQQPQQPHHPEAMSSKALIDQLCRNSRRTPLPRMPQDSSEDESYRTPGRVLPERPERVPTVDLSPSPSERGRADDGSDRLTSPPTPLSVSRAGSRDEETRDSLRIDRSSREREVHNGQEDRDRERKTLTLQQQLNHYPDLHNLYAVSTDKKSACDSKLIVDHSSQKTQQPQQQQQQQQQQQQQQQQKDYSAMSGLVVQLQRGYNTGTSRSGEQSQNSQQPQDRGAVLNMEDSVEQ