Cido004358.3
Basic Information
- Insect
- Calameuta idolon
- Gene Symbol
- Mblk-1
- Assembly
- GCA_030142285.1
- Location
- JARQSV010000335.1:687795-709776[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.2e-18 7.5e-15 54.4 0.1 1 45 414 459 414 459 0.96 2 2 2.2e-18 2.3e-15 56.1 0.0 1 43 826 869 826 871 0.95
Sequence Information
- Coding Sequence
- ATGGCGGATTGCCCCTATGCCCGCTGCATACAGGAACGCAGACACATTCGACGGGAGCTGCTGCGATGGACAAAGAATATGGTCTTCGTTGTCGGTTTGGAACGGGTAGCGGAAGAGTTGATGGGCCGTAGGAGATGGAAGCAATACCAGGACACCCTGTACAGCAGCACTCGGAGCGAATCAGCAACGCAACCGCACCGGCTCTACCCGGCGTCCTCGTGCAACCCCGGCTCGAACCAAGGTCACCGTCAGGTATCGGGGCCGCTGACGGTGAAGCAAGAGCCGCGGCTTCCGAATCACGTCGACGAGGAGCCACGGTGTATCAGGTCGGAGGACATCAAGGTCGAGGTCGAGCTCGAGGCTGCGGAGGTGACACGGGACCAGGTCCTGgaggaggacgacgaggaggaggagaagaagctCAAACTCGCCGAGGACGCGGACCGATCGGTCAGCCCTCTCAGGGAGGTAGACCGTCATCCATCTCAAGAGAGGGATCCGGTCAACGTCACGGACACGGAAGGGACCAAgGAACGGATAGAGAAGGTCGCGTTGGAGCGGACACCAGTGACGCAGGGCTTACTGAGGgtgaagaaggaggaggagctCCAGGAGGCACCGAGCTCTGCAGTCTGTTTAGTGACAGGGGAGACGGAAGTGAGCAGATCAGGGGCCAAGGAGGTGGACAACACGCCGGAGAGCATCGTCGGCGCGTTACCATTCCTCGGAAGCAGACGAGCGAGTCCGCCACCCGAGGATTGGAAACCCCTGGACAAATGTTACTTCTGTCTCGATGGCAAGCTGCCACACGACGACCAGCCGCCCCTTAGCCCTCAGAGTGACAGTAGCAGCAGTTCACGATCGGCCGAGTCCCCGATGTCGGTCCAAGTCGACCCCATGGCAGCATCCGTGGTGGCAGCAGCCCTTAGCGGCACCTACCCCACCTTACTGCCTCAATGGTGTCTACCCCCGAGGGAAGCACCCCTCGTGGGTATCCCGACACATCAAGAAAGTGCCCCGGCAGTTGATCAGCCTCTCGACCTCTCGGCTAAACCTAAAAACTCTCAGGACAACAACATATCCCTATtggaacaacaaaaaatacctCTCAGGATGCCGGCAGGCATCGATCCCAAGAGCATCTTCAACTCATGCTACCGTGCGAAACCGCGGCTGACCGGTCCAGCCGGAGTTGGCGGGGTCCCCGTGGTGGGTGCTGCTGGTGGCCGTAGGACCTACACCGAGGAGGAACTGCAAGCCGCCCTCAGGGACATTCAAAGCGGCAAGCTGGGGACTCGCAGGGCTGCAGTTATTTACGGGATACCGAGGAGCACTCTGAGGAACAAGGTCTACAAGCTCGCGATGGAACGCGAAAGGGACGCTTCCCTGACTAGCACCCATTCACACCCTCACGAGCCTGGCGCCCCAGCCACACCAAATACGACCCAAAACGCCTCCGCAACCAGTCCGCCCCCGCAAGTGGATGAGTTTAACAATCGGCCACTTGACGCCCGTGACGTTGCAAGACTCGAGGTGGACGATAAGGAGCTCTCTGGGgcggaagaggagaaggaagttGAGAAGGCGTTACTGAAGCCCCTACTGTCGTTAGAGGACCTTGTGAGGTTCTCAGCCCTGGAGGGTAGCGGTGGTGATTCCCTGAGGACTTTGCTACAGCGTGGCCAGGAAACGGGGACCGAGTGGCCGGGATTCGAACATGCAAATATCGGTCCATACATTCAGAAGATGCTGGCAGTTGCAGGACCTTTCAAAGGAGGTATGGAAACGCAGGACTATCGGATCCCCGAAGTGATGCGGAGGCTCATGAGCGAggataagaaattgaataagGATGTAAATGGCGATCAGCATCAGCCACAGAGCCAGGTCCATTCGCAGCAACAGTCCCAGCAGCAAACGCAATCACTAGTGACTCATCAGCAGGCACAGCAAGTGCGCGGACCCATCACGAACGATGATTTTAATCCCAGTATAGAAGAAGAGGCGAGCGACAGTGCTCAGAGTAGAGCGATACTGAAAATTCCGTCCTACAAACCGGCAAGTACGCCGGGATCGAGCAAAAACGGCGAGCCAACCTCAGCGGCGTTCGCGCAGAGCTTCGCCGCGACAGCTAGCAGTGCCGCCGGAAGTCCAGGTCTCCTGGAGCGCGTCAGTCCCGCCTATTCCGGCACTAGCAGTCCCACGAATTCCCTGGTGGGCAAAGGTGTCGGGGTCAACTTCCGGGACGTCATTGCTAAAAGTATTAGCGTTAAATTCCAGGAAGGTCAGGGGGGCCTGTCGCAGGGTGTCGTGCAGACGCCTATGATGGTCGACCCGAATCCCTTCAAAAGAGGAAGGTACACGCCTCCTCAACCACCTCAGTCACAACCACCGAAACCAACTCAGGATAACAAACCGAAACCCGGGACTGGTGGCAAAGGCACGAGGCCCAAACGTGGCAAGTATCGGAATTACGATCGTGACAGTCTTGTTGAGGCTGTGCGAGCTGTTCAGCGTGGTGAAATGAGTGTTCATCGTGCGGGAAGTTATTATGGAGTACCACATTCCACTTTGGAGTACAAAGTCAAGGAAAGACATTTAATGAGACCGCGAAAGAGGGACCAGAAACAACCGGACGACAAAGCCAAGGAGGCAGCAACCGCAGCGGCTATGAGGCAAGCCGGACCCGATAAGAAGCCTCAGCTCAAGCCTCAGAAGCCATTCACACCTCCAGGACCTATACCGGGGCCAAACGGCCTTAAAATGCCACCCTTCATGGATGGTATGCCTCACCTACCGTTCGCTCATCCCTTCAACTTCTGGGGCCCAACGCCTTTTATAGGCTCGCCATTCATGACCGGTGCGCCGAATGTCCCGACTATGCTACCAGAACAGTACTTCGCGACGCAGAGGATGCGCGGTCTGCAGGAACAGCAGAGGAACGCGATAGTACAGCAACAAAGGGATAGAGAAGGGATGAACGTGGCTGCGGAACCCGGAACGTCGAACCAACGAGGCTCTGGTATGGGGAAATCAACACGCGAGATAGCAGAGAGCCTGTATGACGGAACGGGAGCTAATGGTAGTTTCCTGGACAACCTGATCAGGTCCAGCCTCGAGACGGGAATACCCCGGGACCAGCGAGCTATCACCGAAGCCAGAAatcaacagcagcaacagcagcagcagcagcagcaacagcagtcTCAGCAACAACACCACCCCGAGGCCATGAGCAGCAAGGCCTTGATAGATCAGCTCTGCCGTAACTCCAGGAGGACGCCGCTCCCCAGGATGCCTCAGGATAGCAGCGAGGACGAGAGCTATCGGACACCCGGTCGAGTTCTTCCCGAGAGACCCGAGAGGGTACCCACGGTCGATCTCAGTCCGTCACCCTCGGAACGTGGGCGCGCCGACGATGGAAGTGATCGTCTAACCTCACCGCCCACGCCACTCTCGGTCTCCAGAGCAGGAAGCAGGGACGAGGAAACAAGGGATTCCTTGAGGATCGACCGTAGTAGCCGGGAACGTGAGGTCCATAACGGTCAGGAGGACCGGGATCGGGAAAGAAAGACTTTGACCTTGCAGCAACAGCTGAATCACTACCCGGACTTACACAACCTCTATGCCGTATCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAGCAGccgcaacaacagcaacaacaacagcagcagccgcagcatcaacaacagcagcagcagcagcagcaaaagGATTACTCGGCCATGAGTGGCCTGGTGGTGCAATTGCAGAGAGGCTACAACACCGGAACGAGCAGGTCCGGTGAGCAGTCGCAGAACAGCCAGCAGCCACAAGATCGCGGCGCTGTGCTCAGCATGGAAGACTCCGTAGAGCAGTAG
- Protein Sequence
- MADCPYARCIQERRHIRRELLRWTKNMVFVVGLERVAEELMGRRRWKQYQDTLYSSTRSESATQPHRLYPASSCNPGSNQGHRQVSGPLTVKQEPRLPNHVDEEPRCIRSEDIKVEVELEAAEVTRDQVLEEDDEEEEKKLKLAEDADRSVSPLREVDRHPSQERDPVNVTDTEGTKERIEKVALERTPVTQGLLRVKKEEELQEAPSSAVCLVTGETEVSRSGAKEVDNTPESIVGALPFLGSRRASPPPEDWKPLDKCYFCLDGKLPHDDQPPLSPQSDSSSSSRSAESPMSVQVDPMAASVVAAALSGTYPTLLPQWCLPPREAPLVGIPTHQESAPAVDQPLDLSAKPKNSQDNNISLLEQQKIPLRMPAGIDPKSIFNSCYRAKPRLTGPAGVGGVPVVGAAGGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLTSTHSHPHEPGAPATPNTTQNASATSPPPQVDEFNNRPLDARDVARLEVDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSALEGSGGDSLRTLLQRGQETGTEWPGFEHANIGPYIQKMLAVAGPFKGGMETQDYRIPEVMRRLMSEDKKLNKDVNGDQHQPQSQVHSQQQSQQQTQSLVTHQQAQQVRGPITNDDFNPSIEEEASDSAQSRAILKIPSYKPASTPGSSKNGEPTSAAFAQSFAATASSAAGSPGLLERVSPAYSGTSSPTNSLVGKGVGVNFRDVIAKSISVKFQEGQGGLSQGVVQTPMMVDPNPFKRGRYTPPQPPQSQPPKPTQDNKPKPGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKAKEAATAAAMRQAGPDKKPQLKPQKPFTPPGPIPGPNGLKMPPFMDGMPHLPFAHPFNFWGPTPFIGSPFMTGAPNVPTMLPEQYFATQRMRGLQEQQRNAIVQQQRDREGMNVAAEPGTSNQRGSGMGKSTREIAESLYDGTGANGSFLDNLIRSSLETGIPRDQRAITEARNQQQQQQQQQQQQQSQQQHHPEAMSSKALIDQLCRNSRRTPLPRMPQDSSEDESYRTPGRVLPERPERVPTVDLSPSPSERGRADDGSDRLTSPPTPLSVSRAGSRDEETRDSLRIDRSSREREVHNGQEDRDRERKTLTLQQQLNHYPDLHNLYAVSTDKKSACDSKLIVDHSSQKTQQPQQQQQQQQQPQHQQQQQQQQQKDYSAMSGLVVQLQRGYNTGTSRSGEQSQNSQQPQDRGAVLSMEDSVEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00293632;
- 90% Identity
- iTF_01475362;
- 80% Identity
- -