Crun004555.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cephus runcator
Gene Symbol
Mblk-1
Assembly
GCA_030142495.1
Location
JARQTC010000394.1:751651-760774[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.8e-18 7.5e-15 54.5 0.1 1 45 393 438 393 438 0.96
2 2 2.4e-18 2.3e-15 56.1 0.0 1 43 805 848 805 850 0.95

Sequence Information

Coding Sequence
ATGATAAGTAGTAGGAGCAGGGCAGGAGGGGGTTTGGAACGGGTAGCGGAAGAGTTGATGGGCCGTAGGAGATGGAAGCAATACCAGGACACCCTGTACAGCAGCACTCGGAGCGAATCAGCAACGCAACCTCACCGGCTCTACCCGGCGTCCTCGTGCAACCCCGGCTCGAACCAAGGTCACCGTCAGACATCGGGGCCGCTGACGGTGAAGCAAGAGCCGCGGCTTCCGAATCACGTCGACGAGGAGCCACGGCGTCTCAGGTCGGAGGAGATCAAGGTCGAGGTCGAGCTCGAGGCTGCGGAGGTGACGCGGGACCAGGTCCtggaggaggacgacgaggaggaggagaagaagctCAAGCTCGCCGAGGACGCGGACCGATCGGTCAGCCCTCTCAGGGAGGTGGACCGTCATCCGTCCCAAGAGAGGGATCCGGTCAACGTCACGGACACGGAAGGGACCAAGGAACGGATAGAGAAGGTCGCGTTGGAGCGGACTCCAGTGACGCAGGGCTTACTGAGGgtgaagaaggaggaggagctCCAGGAGGCACCGAGCTCTGCAGTCTGTTTAGTGACAGGAGAGACGGAAGTGAGCAGGTCAGGGGCCAAGGAGGTGGACAACACGCCGGAGAGCATCGTCGGCGCGTTACCATTCCTCGGAAGCAGACGAGCGAGTCCGCCACCCGAGGATTGGAAACCCCTGGACAAATGTTACTTCTGTCTCGATGGCAAGCTGCCACACGACGACCAGCCGCCCCTTAGCCCTCAGAGTGACAGTAGCAGCAGTTCACGATCGGCCGAGTCCCCGATGTCGGTCCAAGTCGACCCCATGGCAGCATCCGTGGTGGCAGCAGCCCTTAGCGGCACCTACCCCACCTTACTGCCTCAATGGTGTCTACCCCCGAGGGAAGCACCCCTCGTGGGTATCCCGACACATCAAGAAAGTGCCCCGGCAGTTGATCAGCCTCTCGACCTCTCGGCTAAACCTAAAAACTCTCaaGACAACAACATATCCCTAttggaacaacaaaaaatacctCTCAGGATGCCGGCAGGCATCGATCCCAAGAGCATCTTCAACTCATGCTACCGTGCGAAACCGCGGCTGACCGGTCCAGCCGGAGTTGGCGGGGTCCCCGTGGTGGGTGCTGCTGGTGGCCGTAGGACCTACACCGAGGAGGAACTGCAAGCCGCCCTCAGGGACATTCAAAGCGGCAAGCTGGGCACTCGCAGGGCTGCAGTTATTTACGGGATACCTAGGAGCACTCTGAGGAACAAGGTCTACAAGCTCGCGATGGAACGCGAAAGGGACGCTTCCCTGACTAGCACCCATTCACACCCTCACGAGCCTGGCGTCCCAGCCACACCAAATACGACCCAAAACGCCTCCGCAACCAGTCCGCCCCCGCAAGTGGATGAGTTTAACAATCGGCCACTTGACGCCCGTGACGTTGCAAGACTCGAGGTGGACGATAAGGAGCTCTCTGGGgcggaagaggagaaggaagttGAGAAGGCGTTACTGAAGCCCCTACTGTCGTTAGAGGACCTTGTGAGGTTCTCAGCCCTGGAGGGTAGCGGTGGTGATTCCCTGAGGACGTTGCTACAGCGTGGCCAGGAAACGGGTACCGAGTGGCCGGGATTCGAACATGCAAATATCGGTCCATACATTCAGAAGATGCTGGCAGTTGCAGGACCTTTCAAAGGCGGTATGGAAACGCAGGACTATCGGATCCCCGAGGTGATGCGAAGGCTCATGAGCGAggataagaaattgaataagGATGTGAATGGCGATCAGCATCAGCCACAGAGCCAGGTCCATTCGCAGCAACAGTCCCAGCATCAAACGCAATCACAAGTGACGCATCAACAGGCGCAGCAAGTGCGCGGACCCATCACGAACGATGATTTTAATCCCAGTATAGAAGAAGAGGCGAGCGACAGTGCTCAGAGTAGAGCGATACTGAAAATTCCGTCCTACAAACCGGCAAGTACGCCGGGATCGAGCAAAAACGGCGAGCCAACCTCAGCGGCGTTCGCGCAGAGCTTCGCCGCGACCGCTAGCAGTGCCGCCGGAAGTCCAGGTCTCCTGGAGCGCGTCAGTCCCGCCTATTCCGGCACTAGCAGTCCCACGAATTCCCTGGTGGGCAAGGGTGTCGGGGTGAACTTCCGGGACGTCATTGCTAAAAGTATTAGCGTTAAATTCCAGGAAGGTCAGGGAGGCCTGTCACAGGGTGTCGTGCAGACGCCTATGATGGTCGACCCGAATCCCTTCAAAAGAGGAAGGTACACGCCTCCTCAACCACCTCAGTCACAACCACCGAAACCAACTCAGGATAACAAACCGAAACCCGGGACTGGTGGTAAAGGCACAAGGCCCAAACGTGGCAAGTATCGGAATTACGATCGCGACAGTCTCGTTGAGGCTGTGCGAGCTGTTCAGCGCGGTGAAATGAGTGTTCATCGTGCGGGAAGTTATTATGGAGTACCACATTCCACTTTGGAGTACAAAGTCAAGGAAAGACATTTAATGAGACCGCGAAAGAGGGACCAGAAACAACCGGACGATAAAGCCAAGGAGGCAGCAACCGCAGCGGCTATGAGGCAAGCCGGACCCGATAAGAAGCCTCAGCTCAAGCCTCAGAAGCCATTCACACCTCCAGGACCTATACCAGGGCCAAACGGCCTTAAAATGCCACCCTTCATGGATGGCATGCCTCACCTACCGTTCGCTCATCCCTTCAACTTCTGGGGCCCAACGCCTTTCATAGGCTCGCCATTTATGACCGGTGCACCGAATGTCCCGACTATGCTACCGGAACAGTACTTCGCGACGCAGAGGATGCGCGGTCTGCAGGAGCAGCAGAGGAACGCGATAGTACAGCAACAAAGGGATAGGGAAGGGATGAACGTGGCTGCGGAACCGGGAACGTCGAATCAACGAGGCTCTGGTATGGGGAAATCAACACGCGAGATAGCAGAGAGCCTGTATGACGGAACGGGAGCTAATGGTAGTTTCCTGGACAACCTGATCAGGTCCAGTCTCGAGACGGGAATACCCCGGGACCAGCGAGCTATCACCGAAGCCAGAaatcaacagcagcaacaacagcagcagcagcagcagcagcagcaacctCAGCAACCACACCACCCCGAGGCCATGAGCAGCAAGGCCTTGATAGATCAGCTCTGCCGTAACTCCAGGAGGACACCGCTACCCAGGATGCCTCAGGATAGCAGCGAGGACGAGAGCTATCGGACACCCGGTCGAGTTCTCCCCGAGAGACCCGAGAGGGTACCCACAGTCGATCTCAGCCCGTCACCCTCGGAACGTGGGCGCGCCGACGATGGAAGCGATCGTCTAACCTCACCGCCCACGCCACTCTCGGTCTCCAGAGCAGGAAGCAGGGACGAGGAAACGAGGGATTCCTTGAGGATCGACCGTAGTAGCCGGGAACGTGAGGTCCATAACGGTCAGGAGGACCGGGATCGGGAAAGAAAGACTTTGACCTTGCAGCAACAGCTGAATCACTACCCGGACTTACACAACCTCTATGCCGTATCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAGCAGCCGCAGCAAccgcaacaacaacaacagcagcagcagcagcagcagcaacaacagcaaaaGGATTACTCGGCCATGAGTGGCCTGGTGGTGCAATTGCAGAGGGGCTACAGCACCGGAACAAGCAGGTCCGGTGAGCAGTCGCAGAACAGCCAGCAGCCACAAGATCGCGGCGCTGTGCTCAACATGGAAGACTCCGTAGAGCAGTAG
Protein Sequence
MISSRSRAGGGLERVAEELMGRRRWKQYQDTLYSSTRSESATQPHRLYPASSCNPGSNQGHRQTSGPLTVKQEPRLPNHVDEEPRRLRSEEIKVEVELEAAEVTRDQVLEEDDEEEEKKLKLAEDADRSVSPLREVDRHPSQERDPVNVTDTEGTKERIEKVALERTPVTQGLLRVKKEEELQEAPSSAVCLVTGETEVSRSGAKEVDNTPESIVGALPFLGSRRASPPPEDWKPLDKCYFCLDGKLPHDDQPPLSPQSDSSSSSRSAESPMSVQVDPMAASVVAAALSGTYPTLLPQWCLPPREAPLVGIPTHQESAPAVDQPLDLSAKPKNSQDNNISLLEQQKIPLRMPAGIDPKSIFNSCYRAKPRLTGPAGVGGVPVVGAAGGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLTSTHSHPHEPGVPATPNTTQNASATSPPPQVDEFNNRPLDARDVARLEVDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSALEGSGGDSLRTLLQRGQETGTEWPGFEHANIGPYIQKMLAVAGPFKGGMETQDYRIPEVMRRLMSEDKKLNKDVNGDQHQPQSQVHSQQQSQHQTQSQVTHQQAQQVRGPITNDDFNPSIEEEASDSAQSRAILKIPSYKPASTPGSSKNGEPTSAAFAQSFAATASSAAGSPGLLERVSPAYSGTSSPTNSLVGKGVGVNFRDVIAKSISVKFQEGQGGLSQGVVQTPMMVDPNPFKRGRYTPPQPPQSQPPKPTQDNKPKPGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKAKEAATAAAMRQAGPDKKPQLKPQKPFTPPGPIPGPNGLKMPPFMDGMPHLPFAHPFNFWGPTPFIGSPFMTGAPNVPTMLPEQYFATQRMRGLQEQQRNAIVQQQRDREGMNVAAEPGTSNQRGSGMGKSTREIAESLYDGTGANGSFLDNLIRSSLETGIPRDQRAITEARNQQQQQQQQQQQQQQPQQPHHPEAMSSKALIDQLCRNSRRTPLPRMPQDSSEDESYRTPGRVLPERPERVPTVDLSPSPSERGRADDGSDRLTSPPTPLSVSRAGSRDEETRDSLRIDRSSREREVHNGQEDRDRERKTLTLQQQLNHYPDLHNLYAVSTDKKSACDSKLIVDHSSQKTQQPQQPQQQQQQQQQQQQQQQKDYSAMSGLVVQLQRGYSTGTSRSGEQSQNSQQPQDRGAVLNMEDSVEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00293632;
90% Identity
iTF_01475362;
80% Identity
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