Clyc007924.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cecropterus lyciades
Gene Symbol
-
Assembly
GCA_002930495.1
Location
MOOZ01000495.1:81067-89539[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 1.6e-05 0.0013 19.7 3.8 1 23 193 215 193 215 0.98
2 28 0.00056 0.045 14.9 0.8 2 20 248 266 247 268 0.93
3 28 3e-05 0.0024 18.9 0.2 2 23 294 316 293 316 0.96
4 28 0.025 2 9.6 0.2 1 23 371 393 371 393 0.97
5 28 0.022 1.7 9.8 0.1 1 23 411 433 411 433 0.95
6 28 7.8e-05 0.0063 17.5 0.9 2 23 471 492 470 492 0.97
7 28 0.0004 0.032 15.3 2.3 2 23 535 557 535 557 0.97
8 28 8.4e-05 0.0067 17.4 1.3 1 23 607 630 607 630 0.97
9 28 0.0087 0.7 11.1 0.2 1 23 686 708 686 708 0.97
10 28 0.0035 0.28 12.3 7.4 1 23 719 741 719 741 0.99
11 28 0.089 7.1 7.9 1.8 2 23 753 774 752 774 0.96
12 28 0.0035 0.28 12.3 1.0 1 23 784 806 784 806 0.98
13 28 0.0047 0.37 12.0 6.5 1 23 835 857 835 857 0.96
14 28 0.00074 0.06 14.5 4.2 1 23 868 890 868 890 0.97
15 28 3.7e-05 0.003 18.6 0.4 1 23 898 920 898 920 0.98
16 28 0.0082 0.65 11.2 0.1 2 23 940 962 939 962 0.97
17 28 0.15 12 7.2 4.6 1 23 1009 1031 1009 1031 0.98
18 28 0.0022 0.18 13.0 2.0 2 23 1042 1064 1041 1064 0.94
19 28 0.0014 0.11 13.6 0.3 1 23 1086 1108 1086 1108 0.97
20 28 5.7 4.5e+02 2.2 3.9 2 23 1151 1173 1150 1173 0.94
21 28 0.0023 0.19 12.9 0.2 2 23 1189 1210 1188 1210 0.95
22 28 0.73 59 5.0 2.6 5 23 1220 1238 1217 1238 0.94
23 28 0.031 2.5 9.4 0.8 2 23 1249 1271 1248 1271 0.94
24 28 0.46 37 5.7 2.6 2 23 1288 1306 1288 1306 0.89
25 28 0.065 5.2 8.4 2.0 2 21 1310 1329 1309 1330 0.94
26 28 0.11 9 7.6 0.7 2 23 1379 1400 1378 1400 0.94
27 28 0.001 0.081 14.0 0.6 2 23 1411 1433 1410 1433 0.96
28 28 7.4 5.9e+02 1.9 4.6 2 19 1471 1488 1470 1491 0.91

Sequence Information

Coding Sequence
ATGGCACTCAAGCTGGGAAAATGCAGACTTTGTCTCAAGCTTGGAGATTTCTACTCCATCTTCACGATGGACAACAATTTGCAACTCGCTGAAATGGTTATGGAGTGCACCAGGGTGAAAGTTTACGAAGGTGACGGTCTTCCGGACAAAATCTGCTCAGAATGTGTGCAGAAGCTGAGTAGTGCacacatttttaaacaacaatGTGAAAGAGCTGATGAAGAACTTCGACGTAACTATGTTCCACCGCCAGgGTTCAGTATTACTCCACCACCACCAAATAGACAAAGCAGTGATTCGGCTTTTTCGAATCACACAGACATATCAAATAAGCCCTCATCATCAGTTGAAACTAAGGCTACTCCAGCCAGTCGCAATCGTAAGAGAAGTAGAGAGAGCTTAGACAATGCCTCCACAAGTAGTCAATCTCATGACATCACACCAGGTCCCACTAAACGTATTCAGGAGCTTAGAAAAACTCAAAAGCGACCCAAATCAAACTATTACACGGATTCTGATTATGAATGCAACAGTCCACAATTCTCAGCAGAAACGGATTCTGATGATTTTTTAGAGCACAGGTGCAAAGAATGCGATAAAAGTTTTGACAGCAAAAGGGGTTTAATTAATCATACGAGGAAACACACATCTGAAAAAAATCGAAACCAAGAGACTTTGCGCCAACAGGAAACGGTAGTTTCGAATAATGTGGAGGATGCAGCGGATGACGATAATAAATTGAGCTGCGATAAATGCGGTAAGACGTTCAAATTGAAGATAATGCTGAAACGGCATCATGATATTTGCGTATTGAAACAGCCCTTGAAGGAGCTCAAGGTCGCACTTGAGCCGATAGACGGCCTTCGTTCGACGAAGACCGAATGTGAAATTTGCAACGCGAAGTTCAAATCCGttgataatttaaacaaacatttacgAGTGGTTCACGCTGCAGCGCCCAAAAAGGAAAAGGTTACACCCGTAAAAGACGCTCCAGTCGGAAACGGGCTGATAACTATACCGTGCATCTACTGTCAGAAACCCTACACTGATTACTACTCCCACAATGCTCATTTTAACGGTTGTATAAAAGGGAAGTACACGGGTAGTTTTGAATGTCCGctttgtcaaaaaattttgaTAAAGAAGGCGTCGTATTACCTTCATATCAAAGGGCATTACATGCAAGGGACGTCCGTGGCTTCGGGGTCCTCGGAAACTATAAAACGCTATGACTGTAGAATTTGTAAGAAAAGATTGGCCTCTGAAGAACAATTAGTGACCCATTTGGCAGCTCACATGTCTAACATGGAAGATCCTGACGATGAAGAGTCAAGAGCGAGTACACTTGATGATTCAGTATCAGTACAATCGGAATACAGCAACACAAAAGTTTCTACTGGTCCATTAAAATGTGGTATATGTGACAAGAAATTTACTTACAAGAAAGCTCTGGATTCGCACATATCAAAACATTCAGAaactgaaataaacattaaaacagaacCACCTGATAAGAGTCACGATGAGTCAGGTAATTTGTTGACTGAAGTGATGCAACAATCTGAATCAGACTCTAGTCAAGAGGAGGGGGACGATAATACCTGCGACATTTGCGAGAAACAGTTCTCGTACAAACGGCTGCTATTACAACACAAGCGAACGAAGCATCCCATAACAGCGGGGACGAAGCGAGCTAAAGTCAACCTCAAGAACTGCTCGGTACGCTGTCTTATATGCGACATCGAGATGAAAGTAAGCGCGATAAACGAACATAACCAGACGCATATATCGGTGAATATCAAGCCGAGGAATTTGTACACTTGCATGGAGTGTGAGGAGACATTCAAGAGTTGCAGCTCACTGGCGAATCACATAAAGTTGGTTCACCGGTTAAAGCAGACGACGCCGAAAAAGGACATGTCGGCGCCGGACTTGGCGGATTTTTGTGAAGTCGTTGTGACAAAGGCGGAACCCCTGGACACGATCCAGAGTCACAACGGCTTTGGTGAGGTCTCCGCCCAGGATGAAATGCCGCTGGTCAATCTCAGCGGTTTCACTTGCCCCATTTGTAGTAAGCAGATGCCAACATTGATTTCACTCAAGAGACACGTGAACTGGCATACAAACGTGGGTAAGGTGCTAGAGAAGAAGTACGAATGTTTCGTCTGCAAAGAGacATTCCGGTTTCAGTGCCATTATAAAATGCACATGCGAATCCACTACCATGACACGAATTTGGACCCTAAGTTGCTTACGTGCTCCATTTGCAATCGTAAGAGCAAGCATCTACGAGCTGCGCAAGCGCACATGAACTTCCACAAGCAGACTCGTTTCAAAACCAAAGACTACCAGTGCTCCATCTGCAAACGGGTGTTCCAATACCGAAAAGTGTATCTCTCCCACATGGCGATACACTACAAGCGGGGCGAGAGCATCCAGAATACCATCGTGGGCTCCGAGATGCCGAATACAGTGGACAAGAATGTGTTTGACGGAACCCACACTTGCCATATTTGCAACAAAGTTTGCGACTCCGAAACTTCCCTTAAACACCACATCATCTGGCACAAGTCCAAAACCTCCCTGTACGGCAATCGGCACGAATGTCACATCTGCAACCTGCAGTTCACGAACAAGAAGAGATTAGAGCTTCACATCCGGTTACATTTCGAGGACGAGAACGGCCCGTACAAATGCACGATATGCGGCAAAGGTTACATCGATGAGGAGTACTTCCGACGGCACGTGAAGGGGCACAATTTTGACCATCAATCTCATAAGAAAAGGATCGAGAAATTGAGGAAAGGTAAGGTGAAATGCCCCATTTGCGTACGGTACTATCCCGACGTGGTGAAACTCATTCGGCACTTACGGCGGACGCACCCGGAGAGTAAGATGATCAAGGAAGACCCAGACGCGCCGCCGCCCATCTACTACTCGTGTAAGCTGTGCGCCAAGGTGTTCCTCGACGAGCGACGGTTACAATTTCACGAAGAAGCCCATTTACGGAAGCCAGAgttctttaaatgtaaattctGCGGCAAGAAAACGATCTCACTGAAGAATCACAATCTCCATATCAAAAGTCACTTGACACAAAAATATGTGGATAATCCTCTCAGTTGCCCGCAATGTGAAGAAAAGTTTACCAGAGGCTATGATCTGCATCATCATCTACGTGACGTCCACGGTATCAACGAAACCTGGATTGCTGAGCGCACAACGCAAACTTTAGATGGTCCCTTAAAGGAGTTCCAATGCTCCATTTGCCTCAAAATTCTTGCCAGCAAGGGCAACTTTGAGAGACACATAGATTACCATAATTCATTGCGGTGTAACTATTGCTTCGATTACTTTAGCTCTTTAAGATTTTTAGAAGGCCATTTAACGTTTAGTTGCGAAAAGAAAAAGCTATTGGGGAACACAGAAATATATCCGAGGAAGATAAAGTGTCAAATATGCTACAAGGCTTTCCATTTGCAAGTGAAACTCGATTGTCACTTGCGAACACAACACGGGATAAAAGTTTTCAAGGAAGCGTCACAAGCCAAAAAAGAAATTGTATGCGATTACTGCTTTAGAGTCTTTGAAAACGAGTACGCTCTCAATACGCATAAGATTTATCATCGAACTATAGGCTACTATGGATGCATTTACTGTCCTAGGAAATTTAACACTATGACAGCATATCGTAAACATAAAAACCACCACTTTTCACAATTGAACGTTGACAATCCTACAAAGTGTGAGCATTGCGACGAAACCTTTGTGGCGTTCAGAGAAATGATTTATCACATGAAGGATGCTCACGGTGATGATAAAGAGTGGATAATTTTGCCAAAGGAATCTGTTGAAGAAAAATGTcctatttgcaataaaatattctttaatctTCATAGGCATCTCGATTACCACGAAGAAAACAAATGTAAGAAATGCAACGAATACTTTACCTCTCGTGCGGACTTTGACAATCATCTCTGCGCTATTGATTCCGAAGATGAGGGGAATGTTAACACGGGCAATGAAAACGTCCCGAAGTACGAGGAATGTCGCTTCTGTTTCAAACCCATGACCAAGAAGAGTTCGAAACGCATGCACGACCACATTCATAAGAGCTCTGGTTCAATATCCTGTCGGTTTTGTGACTTGAAATTCAAAACCATGGATGCATTCAATATCCATGCGTTTTCTCATCGGAGTAGAAAGTACAACAAAAAACCGATAAAATGTCGAATGTGTGGCGAGAAGTTCGTTAAATATGGACCATTCACGAGGCACATGAAGTCTGTACATAAGAGTCTGAAGAAGATCCACTACAGAGGAATGGTGAAAGAAGAGACATGTGTGGTGTGTGGTGACGACTTTCCTAACCTACACAACCATTATCGCGCACACTTGCAGAACCAGTGCCAGTTGTGTCACAAGTATTTCACATCTTTCAAAGTATTCTCCAAACACGAGTGCGATAAAGAAGACTCCGATCCTACAAAAGTTTTCATTAGTGACGCGGATCTGCCGGCGCTTATCAACTCGTTCGTTCCTAAGGATGAGAAAGACGATGAGAAGTATTACGGATATACTGATgacgaagaagaagaagaagtagAACAGCCTGGAGATCAACCAGATGATGAACCAGATAACGAAGACAGTAAACCTATACTATATGACGAGAACAGTCAAATCACAGTAGATTATGAAAGTCAACATTCTGTGGACGAAGAAGAAGGCAATTTGCATTCAATGGTGCACGCGCCTATTATATCCGATGTGCTATCTCTGTACCAGAAGGAGGAAGATCCGGGCACATCCAATCAtcaagatgatgatgatgtggTAAACTTAGTGGATGAGGATTCTGTGGGTTTCCAAGATGATATTGTAACTGTTATTACTATTGAGGACTGA
Protein Sequence
MALKLGKCRLCLKLGDFYSIFTMDNNLQLAEMVMECTRVKVYEGDGLPDKICSECVQKLSSAHIFKQQCERADEELRRNYVPPPGFSITPPPPNRQSSDSAFSNHTDISNKPSSSVETKATPASRNRKRSRESLDNASTSSQSHDITPGPTKRIQELRKTQKRPKSNYYTDSDYECNSPQFSAETDSDDFLEHRCKECDKSFDSKRGLINHTRKHTSEKNRNQETLRQQETVVSNNVEDAADDDNKLSCDKCGKTFKLKIMLKRHHDICVLKQPLKELKVALEPIDGLRSTKTECEICNAKFKSVDNLNKHLRVVHAAAPKKEKVTPVKDAPVGNGLITIPCIYCQKPYTDYYSHNAHFNGCIKGKYTGSFECPLCQKILIKKASYYLHIKGHYMQGTSVASGSSETIKRYDCRICKKRLASEEQLVTHLAAHMSNMEDPDDEESRASTLDDSVSVQSEYSNTKVSTGPLKCGICDKKFTYKKALDSHISKHSETEINIKTEPPDKSHDESGNLLTEVMQQSESDSSQEEGDDNTCDICEKQFSYKRLLLQHKRTKHPITAGTKRAKVNLKNCSVRCLICDIEMKVSAINEHNQTHISVNIKPRNLYTCMECEETFKSCSSLANHIKLVHRLKQTTPKKDMSAPDLADFCEVVVTKAEPLDTIQSHNGFGEVSAQDEMPLVNLSGFTCPICSKQMPTLISLKRHVNWHTNVGKVLEKKYECFVCKETFRFQCHYKMHMRIHYHDTNLDPKLLTCSICNRKSKHLRAAQAHMNFHKQTRFKTKDYQCSICKRVFQYRKVYLSHMAIHYKRGESIQNTIVGSEMPNTVDKNVFDGTHTCHICNKVCDSETSLKHHIIWHKSKTSLYGNRHECHICNLQFTNKKRLELHIRLHFEDENGPYKCTICGKGYIDEEYFRRHVKGHNFDHQSHKKRIEKLRKGKVKCPICVRYYPDVVKLIRHLRRTHPESKMIKEDPDAPPPIYYSCKLCAKVFLDERRLQFHEEAHLRKPEFFKCKFCGKKTISLKNHNLHIKSHLTQKYVDNPLSCPQCEEKFTRGYDLHHHLRDVHGINETWIAERTTQTLDGPLKEFQCSICLKILASKGNFERHIDYHNSLRCNYCFDYFSSLRFLEGHLTFSCEKKKLLGNTEIYPRKIKCQICYKAFHLQVKLDCHLRTQHGIKVFKEASQAKKEIVCDYCFRVFENEYALNTHKIYHRTIGYYGCIYCPRKFNTMTAYRKHKNHHFSQLNVDNPTKCEHCDETFVAFREMIYHMKDAHGDDKEWIILPKESVEEKCPICNKIFFNLHRHLDYHEENKCKKCNEYFTSRADFDNHLCAIDSEDEGNVNTGNENVPKYEECRFCFKPMTKKSSKRMHDHIHKSSGSISCRFCDLKFKTMDAFNIHAFSHRSRKYNKKPIKCRMCGEKFVKYGPFTRHMKSVHKSLKKIHYRGMVKEETCVVCGDDFPNLHNHYRAHLQNQCQLCHKYFTSFKVFSKHECDKEDSDPTKVFISDADLPALINSFVPKDEKDDEKYYGYTDDEEEEEVEQPGDQPDDEPDNEDSKPILYDENSQITVDYESQHSVDEEEGNLHSMVHAPIISDVLSLYQKEEDPGTSNHQDDDDVVNLVDEDSVGFQDDIVTVITIED*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01153189; iTF_01359958;
90% Identity
iTF_01359958;
80% Identity
-