Basic Information

Insect: Parelbella ahira
Gene Symbol: -
Assembly: GCA_018244795.1
Location: DWME01008188.1:2723-9316[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 1.1e-05 0.00076 20.4 3.8 1 23 156 178 156 178 0.98

2 27 0.00049 0.035 15.2 0.3 2 20 211 229 210 231 0.93

3 27 0.0029 0.21 12.8 0.7 3 23 256 277 255 277 0.97

4 27 6.1 4.4e+02 2.3 0.6 2 19 302 319 301 321 0.79

5 27 0.018 1.3 10.3 0.1 1 23 332 354 332 354 0.97

6 27 0.0097 0.69 11.1 0.5 1 23 370 392 370 392 0.97

7 27 0.001 0.074 14.2 0.5 2 23 430 451 429 451 0.96

8 27 0.0014 0.097 13.8 4.1 2 23 494 516 494 517 0.96

9 27 0.00025 0.018 16.1 1.0 1 23 566 589 566 589 0.97

10 27 0.0035 0.25 12.5 0.2 1 23 645 667 645 667 0.97

11 27 0.003 0.21 12.7 7.0 1 23 678 700 678 700 0.99

12 27 0.7 50 5.3 3.7 2 23 712 733 711 733 0.95

13 27 0.0038 0.27 12.4 1.0 1 23 743 765 743 765 0.98

14 27 0.24 17 6.7 3.1 1 23 793 815 793 815 0.95

15 27 0.00058 0.041 15.0 2.0 1 23 826 848 826 848 0.97

16 27 0.00056 0.04 15.0 0.9 1 23 856 878 856 878 0.98

17 27 0.0029 0.21 12.8 0.3 2 23 898 920 897 920 0.97

18 27 0.076 5.4 8.3 4.2 1 23 967 989 967 989 0.98

19 27 0.011 0.79 10.9 3.9 2 23 1000 1022 999 1022 0.94

20 27 0.0015 0.11 13.6 0.3 1 23 1044 1066 1044 1066 0.97

21 27 0.026 1.9 9.8 0.2 2 23 1147 1168 1146 1168 0.94

22 27 0.06 4.2 8.6 5.4 3 23 1176 1196 1174 1196 0.96

23 27 0.14 10 7.4 0.8 2 23 1207 1229 1206 1229 0.95

24 27 2.4 1.7e+02 3.6 2.6 2 23 1246 1264 1246 1264 0.85

25 27 0.15 10 7.4 0.5 2 23 1337 1358 1336 1358 0.93

26 27 0.00095 0.067 14.3 0.4 2 23 1369 1391 1368 1391 0.96

27 27 1.4 99 4.3 2.6 2 20 1429 1447 1428 1449 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	1.1e-05	0.00076	20.4	3.8	1	23	156	178	156	178	0.98
2	27	0.00049	0.035	15.2	0.3	2	20	211	229	210	231	0.93
3	27	0.0029	0.21	12.8	0.7	3	23	256	277	255	277	0.97
4	27	6.1	4.4e+02	2.3	0.6	2	19	302	319	301	321	0.79
5	27	0.018	1.3	10.3	0.1	1	23	332	354	332	354	0.97
6	27	0.0097	0.69	11.1	0.5	1	23	370	392	370	392	0.97
7	27	0.001	0.074	14.2	0.5	2	23	430	451	429	451	0.96
8	27	0.0014	0.097	13.8	4.1	2	23	494	516	494	517	0.96
9	27	0.00025	0.018	16.1	1.0	1	23	566	589	566	589	0.97
10	27	0.0035	0.25	12.5	0.2	1	23	645	667	645	667	0.97
11	27	0.003	0.21	12.7	7.0	1	23	678	700	678	700	0.99
12	27	0.7	50	5.3	3.7	2	23	712	733	711	733	0.95
13	27	0.0038	0.27	12.4	1.0	1	23	743	765	743	765	0.98
14	27	0.24	17	6.7	3.1	1	23	793	815	793	815	0.95
15	27	0.00058	0.041	15.0	2.0	1	23	826	848	826	848	0.97
16	27	0.00056	0.04	15.0	0.9	1	23	856	878	856	878	0.98
17	27	0.0029	0.21	12.8	0.3	2	23	898	920	897	920	0.97
18	27	0.076	5.4	8.3	4.2	1	23	967	989	967	989	0.98
19	27	0.011	0.79	10.9	3.9	2	23	1000	1022	999	1022	0.94
20	27	0.0015	0.11	13.6	0.3	1	23	1044	1066	1044	1066	0.97
21	27	0.026	1.9	9.8	0.2	2	23	1147	1168	1146	1168	0.94
22	27	0.06	4.2	8.6	5.4	3	23	1176	1196	1174	1196	0.96
23	27	0.14	10	7.4	0.8	2	23	1207	1229	1206	1229	0.95
24	27	2.4	1.7e+02	3.6	2.6	2	23	1246	1264	1246	1264	0.85
25	27	0.15	10	7.4	0.5	2	23	1337	1358	1336	1358	0.93
26	27	0.00095	0.067	14.3	0.4	2	23	1369	1391	1368	1391	0.96
27	27	1.4	99	4.3	2.6	2	20	1429	1447	1428	1449	0.93

Sequence Information

Coding Sequence: ATGTTCGAAATATATGAAGGTGATGGACTTCCTGACAAAATTTGTGCAGAATGCATTCAAAAGCTTAGCAgtgcacatatttttaaacaacagtGTGAAAGATCAGATGAAGAGTTGAGACGCAACTATATTCCACCTCCAGGTTTCGGTACCGCGGTAGAACCACCGAATAGACAAAGCAGTGATTCGGCGTATTCAAATCAAACAGACATATCCAATAAGCCTTTGTCATTACTTGAAACAAAGGGTACGTCCATAGGACGGAATCGTAAAAGAAGCCATGAGAGTTTAGGCAATGCTTCCACAAGCAGTCAGTCTCATGATACTGGAACTGGCACCAACAAACGTGTCCAGGAACTTAGGAGAACTCAAAAGCGACAAAAGACAAATTACTATACAGATTCCGATTATGAATATAACAGTCCACACTTTTCTGCTGAAACGGACTCTGATGACTTTCTAGAGCACAGATGCAAAGAATGTAATAAACGTTTCGACAGCAGCAGAGGTTTGATAAATCACATGAGGAAGCACACATCAGAAAAAAAAGGGAAGCAGGAAAGTGTGCGTGAAACTGAAGCCATTATGTCCAACGATTTGAAGGACGCGACTGATGACCATGACAAACTGAACTGCGATAAATGCGGGAAGTCATTCAAGttgaaaataatgttgaaaCGACATTATGATATTTGTATACCGCCGATGAAAGAGCTTAAGGTAGCTTTGGAGCCGATCGATGGAAAACGGTCAACAAAGAACGATTGTGAAATATGCAATGCGAAATTTAAATGCCCCGAAAATTTGGAGAAGCATTTACGAGTTGTACACGGGTCCGcacaaaaaaaggaaaaaacggCTACGCCACAGTCCACAAAACCGGAAAACGGAAAATTTACATTACCTTGCATGTATTGTAAAAAGCCATTCGGAGATTATTACTCTCATAACGCCCACTTCAATGCATGTCTCAAAGGAAAGTATACTGGTAGTTTTGAGTGTCCGCTGTGTCAAAAAGTAGTGATCAAAAAAgcatcatattatattcatgttaaaGCACATTACATGCAAGTAACTGCAAAAAGTTCATCTGAAAGTCCAAAATGCTTTGACTGTCGAATATGTAGGAAGAAATTAGCCTCTGAAGAACAATTGTTCGTGCATCTTTCGACTCATATAACTGAAGTGATAGATCCCGAGGATGATGGATCCggagCGAGCACACTTGATGATTCAACATCAGTGCAATCTGAATACAGCAATTCCAAAGTACCAAGTGGTCCATTAAAATGTGGAATTTGTGATAGGAAATTTACATATAGAAAAGCTTTGGATTCACATGTTGCAAAACATACACAAGAAGAAGTAAACGTTAAAACGGAACCGCCAGATAAGTTTCAAGATGAATCAATGGATTTGTTGGCTGAGGCTGCTCAGCAATCAGAATCTGAGTCAAGTCAAGATGAAGGAGATGATAACACATGTGACATTTGTGAGAAGCAATTCTCGTACAAAAGGCTGTTGTTACAACACAAGCGCACTAAGCACCACATGACGGCTGGGACGAAGCGAGCAAAAGTCAACCTCAAGGACTGCTCGGTCCGTTGTCTGATTTGCGACATCGAGATGAAAGTGAGCGCGATAAATGAGCATAACCAAACTCACATATCAATGAACATAAAGCCCAGAAATCTCTACACTTGCATGGAATGCGAGGAGAAGTTTAAGAGTTGCAGTGCGTTAGCGAATCATATAAAATTGGTGCACCGGCTGAAGCAGCAGACGCCAAAGCAGGACGTGACTGCGCCGGATTTGGCGGATTTTTGTGAAGTCGTTGTGACGAAGGCGGAACCACTGGATGCGATCCAGAGTCACAACGGCTTTGGTGAGGTCTCCGCCTTGGATAACACGCCGCTGGTCAATCTGAGCGGCTTCACTTGTCCCATATGTAATAAGCAGATGCCTACACTGATTTCACTCAAGAGACATGTCAACTGGCACACAAATGTTGGCAAAATTATGGAGAAAAAGTATGAATGTTTTGTCTGTCAAGAGACTTTCCGGTTCCAATGCCACTACAAAATGCACATGCGCGTCCATTATAAAGACACGAACTTGGATCCCAAGTTGCTGACATGCACCATATGCAATCGAAAGAGTAAACATTTGCGTGCTGCACAGGCACACATGCATTTCCACAAGCAGACTCGTTTTAAAACCAAAGACTACCAGTGTTCGATTTGCAAACGAGTATTTCAATATCGGAAGGTGTACCTGTCTCATATGGCGATACACTACAAACGCGGCGAGAGTGTTAATACGATTGTTGGTGTCGAGCTGCCCAACACCGCAGACAAGACAGTATTCGATGGAACTCACACATGCGTCATTTGTAAGAAAGTTTGCGATTCAGAGATTTCCCTCAAGTACCATACTACTTGGCACAAGTCGAAAACATCTCTTTACGGCAACCGACATGAGTGTTCCATATGCAACCTCCAGTTCACAAACAAGAGAAGATTGGAGTTGCATATTAGACTACATTACGAAGATGAAAATGGCCCTTACAAATGCAGAATATGCGGAAAAGGCTACATCGACGAGAATTTTTACAAGCGGCATCTAAAAGGGCACAACTTTGATCATCATTCGCATAAAAAACGAATCGAAAAATTGAGAAAGGATAAGGTAAAGTGTCCAATCTGCACCAGATACTATCCCGACCTCTTGAAACTTATTCGACACTTGAGGCGGACGCACCCGGAAAGCAAAATGATAAAGGAGGACCCGGACGCGCCACCACCCAGCTACTATTCTTGCAAATTGTGCGCCAAGGTGTTTCTCGACGAACGCAGGCTGCAATGTCATGAGGAGGCTCATTTGAGGAAGCCAGAgttctttaaatgtaaattttgcgGCAAAAAAACTATCTCGTTAAAGAATCACAATGTGCATATCAAAAGTCATTTGTGTCAGAAGTATATAGAAAATCCTCTCAGTTGTCCACATTGTGAGGAAAAATTTACTAAAGGATATGATCTCCACCATCATCTCAGAGACGTTCACGACATCAATGAGACTTGGATCGCGGAGCGCACCGTGCAAACATTAGATGCCCCACTGAAAGAATTCCAATGCTCTATCTGCCTCAAAATCCTAGCCAGCAAGGGCAACTTTGAAAGACATATAGATTACCATAATTCACTGAGATGCAATTATTGTTTCGATTACTTTAGCTCATTGAGATTTTTGGAAGGTCATTTAACATTCAGTTGCGATAAGAAAAAACTATTAGGTGACACAGAAATATATCCGAGAAAGATAAAGTGTCAAGTGTGTTACAAGGCTTTCCATTTGCAAGTGAAGTTGGACTGCCATTTGCGTACACAACATGGCATCAAAGTGTTCAAAGAGGCTGCAGAGGGTAAAAAGGAAATTGTTTGCGATTTCTGTTTTAAAGTGTTTGAAAATGAATACGCTCTCAACGGTCATAAAATTTATCATCGAACAGTGGGCTACTATGGATGTCGTTACTGCAATAGAAAGTTTAACACCGTCTCTACGTACAAGAAGCATAAAAATCACCATTTATCTCAGCTGAATGTGGACAATCCTACGAAGTGCGAGCATTGCGAGGAAACCTTTGTCGCGTTTAGAGAAGTGATATACCACATGAAGAATGTTCATGGTGACGACAAAGAGTGGATAGTGTTACCGAAGGAGTCCATCGAAGAGAAATGTCCGATTTGCTACAAAATATTCTTCAACCTTCATAGACATCTCGACTATCACGAAGCGAACAAGTGTAAGAAGTGTAACGAATACTTTCTTTCTCGCATAGAGTTCGATAATCATCTTTGCGCCATAGATTCGGAAGACGAATCAAATGGTAATAATGTCAACATAGACACCCAGAAGTACGAGGAGTGCCGCTTTTGTTTCAAACCCATAACCAGGAAAAATTCCAAGCGTTTGCACGATCAAATTCATAAGAGTTCGGGATCCATATCATGTCGATTCTgcgatttgaaatttaaaacaatagacgCTTTTAACATCCACGCGTTTTCCCACCGAAGCaggaaatataacaaaaaacccATAAAATGCCGAGTTTGCGgcgaaaaatttgttaaatacgGACCCTTTACGAGGCATATGAAATCCGTTCACAAAAGTATAAAGAAGCTTCACTACAGGGCGACGGTCAAAGAGGAGACATGCGTGGTGTGTGGTGACGACTTTCCTAACCTACATAACCACTATCGGGCGCATCTTCAGAACCAGTGCCAGCTCTGTCGCAAGTATTTCACATCTTTCGCCTTGTTTTCGAAACATGAATGCGATAAGGAAGACTCAAATCCTTCAAAGGTATTCACTAGTGACGCAAATTTGCCCGAACTAATCAATTCGTATGTTCCAAAAGACGAAAAGGATGATGAAAAGTATTATGGATACACTGATGATGAGGAAGAGGATATGAATAAGCCAGATGAGGAACAATACGATATGCCCTTGGAgagtaaatttgaaatatttgatgagGACAGTCAAGTACCATTAGATGATGAAAGTCAGAATTCAGTTGATGATGTAGATGGTAATATGCACTCAATGGTCCACACCCCTATCATATCTGATGTACTTTCTCTTTACCAAAAGAAAGAAGATCCGGGAACTTCCAAGTCgcaagataatgatgatgtgatAGATCTGGTTGATGAAGATTCTGTTGGTTTTCAAGACAATATTTTAACCGTTATTACaattgaagaataa
Protein Sequence: MFEIYEGDGLPDKICAECIQKLSSAHIFKQQCERSDEELRRNYIPPPGFGTAVEPPNRQSSDSAYSNQTDISNKPLSLLETKGTSIGRNRKRSHESLGNASTSSQSHDTGTGTNKRVQELRRTQKRQKTNYYTDSDYEYNSPHFSAETDSDDFLEHRCKECNKRFDSSRGLINHMRKHTSEKKGKQESVRETEAIMSNDLKDATDDHDKLNCDKCGKSFKLKIMLKRHYDICIPPMKELKVALEPIDGKRSTKNDCEICNAKFKCPENLEKHLRVVHGSAQKKEKTATPQSTKPENGKFTLPCMYCKKPFGDYYSHNAHFNACLKGKYTGSFECPLCQKVVIKKASYYIHVKAHYMQVTAKSSSESPKCFDCRICRKKLASEEQLFVHLSTHITEVIDPEDDGSGASTLDDSTSVQSEYSNSKVPSGPLKCGICDRKFTYRKALDSHVAKHTQEEVNVKTEPPDKFQDESMDLLAEAAQQSESESSQDEGDDNTCDICEKQFSYKRLLLQHKRTKHHMTAGTKRAKVNLKDCSVRCLICDIEMKVSAINEHNQTHISMNIKPRNLYTCMECEEKFKSCSALANHIKLVHRLKQQTPKQDVTAPDLADFCEVVVTKAEPLDAIQSHNGFGEVSALDNTPLVNLSGFTCPICNKQMPTLISLKRHVNWHTNVGKIMEKKYECFVCQETFRFQCHYKMHMRVHYKDTNLDPKLLTCTICNRKSKHLRAAQAHMHFHKQTRFKTKDYQCSICKRVFQYRKVYLSHMAIHYKRGESVNTIVGVELPNTADKTVFDGTHTCVICKKVCDSEISLKYHTTWHKSKTSLYGNRHECSICNLQFTNKRRLELHIRLHYEDENGPYKCRICGKGYIDENFYKRHLKGHNFDHHSHKKRIEKLRKDKVKCPICTRYYPDLLKLIRHLRRTHPESKMIKEDPDAPPPSYYSCKLCAKVFLDERRLQCHEEAHLRKPEFFKCKFCGKKTISLKNHNVHIKSHLCQKYIENPLSCPHCEEKFTKGYDLHHHLRDVHDINETWIAERTVQTLDAPLKEFQCSICLKILASKGNFERHIDYHNSLRCNYCFDYFSSLRFLEGHLTFSCDKKKLLGDTEIYPRKIKCQVCYKAFHLQVKLDCHLRTQHGIKVFKEAAEGKKEIVCDFCFKVFENEYALNGHKIYHRTVGYYGCRYCNRKFNTVSTYKKHKNHHLSQLNVDNPTKCEHCEETFVAFREVIYHMKNVHGDDKEWIVLPKESIEEKCPICYKIFFNLHRHLDYHEANKCKKCNEYFLSRIEFDNHLCAIDSEDESNGNNVNIDTQKYEECRFCFKPITRKNSKRLHDQIHKSSGSISCRFCDLKFKTIDAFNIHAFSHRSRKYNKKPIKCRVCGEKFVKYGPFTRHMKSVHKSIKKLHYRATVKEETCVVCGDDFPNLHNHYRAHLQNQCQLCRKYFTSFALFSKHECDKEDSNPSKVFTSDANLPELINSYVPKDEKDDEKYYGYTDDEEEDMNKPDEEQYDMPLESKFEIFDEDSQVPLDDESQNSVDDVDGNMHSMVHTPIISDVLSLYQKKEDPGTSKSQDNDDVIDLVDEDSVGFQDNILTVITIEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00288236;
90% Identity: -
80% Identity: -