Basic Information

Insect: Spicauda simplicius
Gene Symbol: -
Assembly: GCA_949699795.1
Location: OX453060.1:4337756-4349075[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 3.9e-07 3.6e-05 24.7 2.2 1 23 193 215 193 215 0.98

2 28 0.00045 0.041 15.1 0.3 2 20 247 265 246 267 0.93

3 28 1.2e-05 0.0011 20.1 0.1 2 23 293 315 292 315 0.96

4 28 1.3 1.2e+02 4.2 0.3 1 23 370 392 370 392 0.93

5 28 0.063 5.7 8.4 0.3 1 23 410 432 410 432 0.93

6 28 7.6e-05 0.007 17.5 0.5 2 23 470 491 469 491 0.97

7 28 0.0002 0.018 16.2 2.0 2 23 534 556 534 556 0.97

8 28 8.1e-05 0.0074 17.4 1.3 1 23 606 629 606 629 0.97

9 28 0.0031 0.29 12.4 0.2 1 23 685 707 685 707 0.97

10 28 0.0021 0.19 13.0 6.5 1 23 718 740 718 740 0.99

11 28 0.086 7.8 7.9 1.8 2 23 752 773 751 773 0.96

12 28 0.0034 0.31 12.3 1.0 1 23 783 805 783 805 0.98

13 28 0.0074 0.67 11.3 4.7 1 23 834 856 834 856 0.96

14 28 0.00044 0.04 15.1 4.6 1 23 867 889 867 889 0.98

15 28 3.1e-05 0.0028 18.8 0.4 1 23 897 919 897 919 0.98

16 28 0.0079 0.72 11.2 0.1 2 23 939 961 938 961 0.97

17 28 0.15 13 7.2 4.6 1 23 1008 1030 1008 1030 0.98

18 28 0.0084 0.77 11.1 2.9 2 23 1041 1063 1040 1063 0.94

19 28 0.0013 0.12 13.6 0.3 1 23 1085 1107 1085 1107 0.97

20 28 5.5 5e+02 2.3 3.9 2 23 1150 1172 1149 1172 0.94

21 28 0.0022 0.2 12.9 0.2 2 23 1188 1209 1187 1209 0.95

22 28 7.8 7.1e+02 1.8 2.9 5 23 1219 1237 1216 1237 0.93

23 28 0.03 2.7 9.4 0.8 2 23 1248 1270 1247 1270 0.94

24 28 0.45 41 5.7 2.6 2 23 1287 1305 1287 1305 0.89

25 28 0.14 12 7.3 2.0 2 21 1309 1328 1308 1329 0.94

26 28 0.11 9.8 7.6 0.7 2 23 1378 1399 1377 1399 0.94

27 28 0.00098 0.089 14.0 0.6 2 23 1410 1432 1409 1432 0.96

28 28 2.4 2.2e+02 3.4 1.6 2 19 1470 1487 1469 1487 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	3.9e-07	3.6e-05	24.7	2.2	1	23	193	215	193	215	0.98
2	28	0.00045	0.041	15.1	0.3	2	20	247	265	246	267	0.93
3	28	1.2e-05	0.0011	20.1	0.1	2	23	293	315	292	315	0.96
4	28	1.3	1.2e+02	4.2	0.3	1	23	370	392	370	392	0.93
5	28	0.063	5.7	8.4	0.3	1	23	410	432	410	432	0.93
6	28	7.6e-05	0.007	17.5	0.5	2	23	470	491	469	491	0.97
7	28	0.0002	0.018	16.2	2.0	2	23	534	556	534	556	0.97
8	28	8.1e-05	0.0074	17.4	1.3	1	23	606	629	606	629	0.97
9	28	0.0031	0.29	12.4	0.2	1	23	685	707	685	707	0.97
10	28	0.0021	0.19	13.0	6.5	1	23	718	740	718	740	0.99
11	28	0.086	7.8	7.9	1.8	2	23	752	773	751	773	0.96
12	28	0.0034	0.31	12.3	1.0	1	23	783	805	783	805	0.98
13	28	0.0074	0.67	11.3	4.7	1	23	834	856	834	856	0.96
14	28	0.00044	0.04	15.1	4.6	1	23	867	889	867	889	0.98
15	28	3.1e-05	0.0028	18.8	0.4	1	23	897	919	897	919	0.98
16	28	0.0079	0.72	11.2	0.1	2	23	939	961	938	961	0.97
17	28	0.15	13	7.2	4.6	1	23	1008	1030	1008	1030	0.98
18	28	0.0084	0.77	11.1	2.9	2	23	1041	1063	1040	1063	0.94
19	28	0.0013	0.12	13.6	0.3	1	23	1085	1107	1085	1107	0.97
20	28	5.5	5e+02	2.3	3.9	2	23	1150	1172	1149	1172	0.94
21	28	0.0022	0.2	12.9	0.2	2	23	1188	1209	1187	1209	0.95
22	28	7.8	7.1e+02	1.8	2.9	5	23	1219	1237	1216	1237	0.93
23	28	0.03	2.7	9.4	0.8	2	23	1248	1270	1247	1270	0.94
24	28	0.45	41	5.7	2.6	2	23	1287	1305	1287	1305	0.89
25	28	0.14	12	7.3	2.0	2	21	1309	1328	1308	1329	0.94
26	28	0.11	9.8	7.6	0.7	2	23	1378	1399	1377	1399	0.94
27	28	0.00098	0.089	14.0	0.6	2	23	1410	1432	1409	1432	0.96
28	28	2.4	2.2e+02	3.4	1.6	2	19	1470	1487	1469	1487	0.91

Sequence Information

Coding Sequence: ATGGCACTCAAGCTGGGAAAATGCAGACTTTGTCTCAAGCTTGGAGATTTCTACTCCATCTTTACGATGGACAACAACTTGCAACTCGCCGAAATGGTTATGGAGTGCACCAGGGTAAAAGTTTACGAAGGTGACGGACTCCCGGACAAAATCTGCTCAGAATGCGTGCAAAAGCTGAGTAGTGCGCACATTTTCAAACAACAATGTGAAAGAGCTGATGAAGAACTTCGGCGCAACTATGTTCCACCACCAGGGTTTAGTATTACTCCACCACCACCAAATAGACAAAGCAGTGATTCAGCTTTTTCGAATCACACAGACATATCAAACAAACCCTCATCATCAGTTGAAACAAAGCCCACTCCAGCCAGTCGCAATCGTAAGAGAAGTAGAGAGAGCTTTGACAATGCCTCCACAAGTAGTCAATCTCATGACATTACTCCTGGTCCTACAAAACGAATCCAGGAGCTTAGAAAAAGTCAAAAGCGAACTAAATCAAACTATTACACAGATTCCGATTATGAATACAACAGCCCACAATTCTCGGCAGAAACTGATTCCGATGACTTTTTAGAGCACAAGTGCAAAGAATGTGGTAAAACTTTTGATAGCAGCAGGGGTTTGATTAATCATATGAGGATGCATGAAAAAAATGCACGAAAGCAAGAGACCGTACGCGAACAAGAAGCGGTAGTTTCGAATAATGTTGAGGATGCGGCGGATGTCGATAACCAACTGAGTTGCGACAAATGCGGTAAGACGTTCAAGTTGAAGATAATGCTGAATCGGCATCGTGATATTTGCTTATTGAAACAGCCCATGAAAGAGCTCAAGGTAGCACTGGAGCCGATAGACGGATTTCTTCCGACGAAGATAGAATGTGAAATATGCAACGCGAAGTTCAAGTCCGCTGATAATTTGGCCAAGCATTTAAGGGTGGTTCACGCTGCAGCGCCCAAAAAGGAAAAGGTTACAGCCGTGAAAGGCACTTCAGCCGGAAACGGGCTAATTACAATACCATGCATATACTGTCGGAAGCCATACACTGATTACTACTCCCACAACGCCCATTTTAACGGGTGCATAAAAGGAAAGTACACTGGTAGTTTTGAATGTCCGCTATGTCAAAAGATTCTGCTCAAGAAAGCTTCATATTACCTTCATATTAAAGGACATTACATGCAAGGGACGTCCACGGCATCTGGGTCTTCGGAAACTGTAAAACGCCATGATTGTCGAATTTGTAAGAAAAAATTACCCTCTGAAGAACAATTAGTGACCCATCTGGCAGCTCACATGTCTAACATGGAAGATCCAGATGATGAAGAGTCAAGAGCGAGTACACTTGATGACTCAGTATCAGTACAATCAGAATACAGCAACACAAAAGTTTCAAGTGGTCCATTGAAATGCGGCATATGCGATAAGAAATTCACTTACAAGAAAGCTTTGGATTCGCACATAGCGAAACATTCGgaaactgaaataaatattaaaacagaacCGCCCGATAAGAGCCTCGATGAGTCAGGTAATTTGTTGACTGAAGTAATGCAGCAATCAGAATCGGACTCTAGTCAAGAGGAGGGGGACGATAATACCTGTGACATTTGCGAGAAACAGTTCTCGTACAAACGGCTGCTTATCCAACACAAGCGAACAAAGCATCCCATAACAGCGGGGACCAAGCGAGCCAAAATCAACCTCAAGAACTGCTCAGTGCGCTGTCTTATTTGCGATATCGAGATGAAAGTTAGCGCAATAAACGAGCACAACCAGACGCATATATCTGTGAATATCAAACCTAGGAATTTGTACACTTGCATGGAGTGTGAGGAGACATTCAAGAGTTGCAGCTCGCTGGCCAATCACATAAAGTTGGTACACCGGCTGAAGCAGACGACGCCGAGGAAGGACAGCTCGGCGCCGGACCTGGCGGATTTTTGTGAAGTCGTTGTGACAAAGGCGGAACCCCTGGACACGATCCAGAGTCACAACGGCTTTGGTGAGGTCTCCGCCCCGGACGGCACGCCGCTGGTCAATCTCAGCGGTTTCACTTGCCCCATTTGTAACAAGCAGATGCCTACTTTGATTTCACTCAAGAGGCACGTGAACTGGCATACAAATGTGGGTAAGGTTCTAGAGAAGAAGTACGAATGTTTCGTGTGCAAAGAGGTATTCCGGTTTCAATGCCACTACAAAATGCACATGCGTGTCCATTATCATGACACGAATTTGGACCCCAAACTGCTTACGTGCTCCATTTGCAATCGTAAGAGCAAGCACCTACGAGCTGCGCAGGCGCACATGAACTTCCACAAGCAGACTCGTTTCCAAACCAAAGACTACCAGTGCTCCATCTGTAAACGGGTGTTCCAATACCGAAAAGTGTACCTCTCCCACATGGCGATACATTACAAGCGAGGCGAGAGTATCCAGAACACCATCGTGGGCTCCGAGATGCCGACTACAGCGGACAAGACAGTATTCGACGGAACCCACACTTGCCGCATTTGCAACAAAGTTTGCGACTCTGAAACTTCCCTTAAACATCACATCATCTGGCACAAGTCCAAAACTTCCCTTTACGGCAATCGGCATGAATGTCACATTTGCAACCTGCAGTTCACGAACAAAAAGCGATTGGAGCTCCACATTCGATCACATTTTGAAGATGACAACGGCCCCTACAAATGCACGATATGCGGCAAAGGTTACATCGACGAGGATTACTACAAACGGCATGTAAAGGGGCACAATTTTGATCATCAATCgcataaaaaacgtattgagaAATTGAGGAAGGGTAAGGTGAAATGCCCCATTTGCGTACGGTACTATCCGGACGTGGTAAAACTTATTCGACACTTGCGGCGGACGCACCCAGAGAGTAAGATGATCAAGGAAGACCCGGACGCGCCGCCGCCCATCTACTACTCCTGCAAGCTGTGCGCCAAGGTGTTCCTCGACGAGCGGCGATTGCAATTTCACGAAGAAGCCCATTTACGGAAACCGGAGTTCTTTAAATGTAAATTCTGCGGTAAGAAAACAATCTCACTGAAGAATCATAATCTTCACATCAAAAGTCACTTGACACAAAAATATGTGGATAATCCTCTCAGTTGCACGCAATGTGAGGAAAAGTTTACCAGAGGCTATGATCTGCATCATCATCTTCGTGACGTCCACGGTATCAACGAAACCTGGATTGCTGAGCGGACTACGCAAACCTTAGATGGTCCCTTGAAAGAGTTCCAATGCTCCATCTGTCTCAAAATTCTTGCCAGCAAAGGTAACTTTGAAAGACACATCGATTACCATAATTCATTGCGATGTAACTATTGCTACGATTATTTTAGTTCCTTAAGATTTTTAGAAGGCCACTTAACGTTTAGTTGCGACAAGAAAAAGCTATTGGGGGACACAGAAAAATATCCTAGGAAGATAAAGTGTCAAATATGCTACAAGGCTTTCCATTTGCAAGTGAAACTCGATTGTCACTTAAGGACACAACACGGCATCAAGGTTTTCAAGGAAGCCTCACAGGCCAAAAAAGAAATCGTATGCGATTACTGCTTTAGAGTTTTTGAAAACGAGTACGCTCTCAATACGCATAAGATTTATCATCGGACTATAGGCTACTATGGATGCATTTACTGTGCTAGGAAATTTAACACGATGACTGCCTATCGTAAACATAAAAATCATCACTTTTCACAATTGAACGTCGACAATCCGACAAAATGTGAGCATTGCGACGAAACTTTTGTGGCGTTCAGAGAAATGATTTACCATATGAAAGATGCCCATGGTGATGACAAAGAGTGGATAGTTTTGCCCAAGGAATCTGTTGAGGAGAAATGTCccatttgcaataaaatattcttcaatCTTCATAGACATCTTGATTACCACGaagaaaacaaatgtaaaaaatgcaaTGAATATTTCAACTCTCGTGCCGACTTTGACAATCATCTTTGCGCTATTGATTCCGAAGATGAAGGGAATGCCAACACGGGCAATGAAAACGTCCCGAAGTACGAGGAGTGCCGCTTCTGTTTCAAGCCCATGACCAAGAAGAGTTCGAAACGCATGCACGATCACATTCATAAGAGCTCTGGTTCCATATCTTGTCGGttttgtgatttgaaatttaaaaccaTGGATGCATTTAATATCCACGCGTTCTCTCATCGAAGTAGAAAGTATAACAAAAAACCGATAAAGTGTCGAATGTGTGGCGAAAAATTCGTTAAATATGGACCATTTACGAGGCACATGAAGTCGGTACATAAGAGCTTGAAGAAGATCCACTACAGGGGAATGGTGAAGGAAGAGACGTGTGTGGTGTGCGGCGACGACTTTCCTAACCTACACAACCACTACCGCGCACACTTGCAAAACCAGTGCCAATTGTGTCGGAAATATTTCACATCTTCCAAGGTGTTCTCAAACCACGACTGcgataaagaggactccgatcCTTCGAAAGTTTTCATTAGTGACGCGGATCTGCCAGCGCTTATTAACTCGTTCGTCCCGAAGGATGAAAAGGACGATGAGAAGTACTATGGATATACCGATGACGAAGAGGAGGAAGAGGAACAACCAGATGTGGCAGGTGAGGAACCAGATAACGAAGACAATAAACCTTTGTTGTACGACGAGAATAGTCAAAACACTTTGGATGAAGAAAGCCAAAATTCAGTGGATGAAGAAGAAGGTAACTTGCATTCAATGGTGCACGCGCCTATTATATCCGATGTGCTCTCACTGTACCAGAAAGAGGAAGACCCCGGCACCTCCAATCAACAAGATGACGACGTGGTAAATTTGATCGATGAAGATTCAGTGGGTTTCCAAGATGAAGTTGTAACCGTTATTACTATTGAGGACTGA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTMDNNLQLAEMVMECTRVKVYEGDGLPDKICSECVQKLSSAHIFKQQCERADEELRRNYVPPPGFSITPPPPNRQSSDSAFSNHTDISNKPSSSVETKPTPASRNRKRSRESFDNASTSSQSHDITPGPTKRIQELRKSQKRTKSNYYTDSDYEYNSPQFSAETDSDDFLEHKCKECGKTFDSSRGLINHMRMHEKNARKQETVREQEAVVSNNVEDAADVDNQLSCDKCGKTFKLKIMLNRHRDICLLKQPMKELKVALEPIDGFLPTKIECEICNAKFKSADNLAKHLRVVHAAAPKKEKVTAVKGTSAGNGLITIPCIYCRKPYTDYYSHNAHFNGCIKGKYTGSFECPLCQKILLKKASYYLHIKGHYMQGTSTASGSSETVKRHDCRICKKKLPSEEQLVTHLAAHMSNMEDPDDEESRASTLDDSVSVQSEYSNTKVSSGPLKCGICDKKFTYKKALDSHIAKHSETEINIKTEPPDKSLDESGNLLTEVMQQSESDSSQEEGDDNTCDICEKQFSYKRLLIQHKRTKHPITAGTKRAKINLKNCSVRCLICDIEMKVSAINEHNQTHISVNIKPRNLYTCMECEETFKSCSSLANHIKLVHRLKQTTPRKDSSAPDLADFCEVVVTKAEPLDTIQSHNGFGEVSAPDGTPLVNLSGFTCPICNKQMPTLISLKRHVNWHTNVGKVLEKKYECFVCKEVFRFQCHYKMHMRVHYHDTNLDPKLLTCSICNRKSKHLRAAQAHMNFHKQTRFQTKDYQCSICKRVFQYRKVYLSHMAIHYKRGESIQNTIVGSEMPTTADKTVFDGTHTCRICNKVCDSETSLKHHIIWHKSKTSLYGNRHECHICNLQFTNKKRLELHIRSHFEDDNGPYKCTICGKGYIDEDYYKRHVKGHNFDHQSHKKRIEKLRKGKVKCPICVRYYPDVVKLIRHLRRTHPESKMIKEDPDAPPPIYYSCKLCAKVFLDERRLQFHEEAHLRKPEFFKCKFCGKKTISLKNHNLHIKSHLTQKYVDNPLSCTQCEEKFTRGYDLHHHLRDVHGINETWIAERTTQTLDGPLKEFQCSICLKILASKGNFERHIDYHNSLRCNYCYDYFSSLRFLEGHLTFSCDKKKLLGDTEKYPRKIKCQICYKAFHLQVKLDCHLRTQHGIKVFKEASQAKKEIVCDYCFRVFENEYALNTHKIYHRTIGYYGCIYCARKFNTMTAYRKHKNHHFSQLNVDNPTKCEHCDETFVAFREMIYHMKDAHGDDKEWIVLPKESVEEKCPICNKIFFNLHRHLDYHEENKCKKCNEYFNSRADFDNHLCAIDSEDEGNANTGNENVPKYEECRFCFKPMTKKSSKRMHDHIHKSSGSISCRFCDLKFKTMDAFNIHAFSHRSRKYNKKPIKCRMCGEKFVKYGPFTRHMKSVHKSLKKIHYRGMVKEETCVVCGDDFPNLHNHYRAHLQNQCQLCRKYFTSSKVFSNHDCDKEDSDPSKVFISDADLPALINSFVPKDEKDDEKYYGYTDDEEEEEEQPDVAGEEPDNEDNKPLLYDENSQNTLDEESQNSVDEEEGNLHSMVHAPIISDVLSLYQKEEDPGTSNQQDDDVVNLIDEDSVGFQDEVVTVITIED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00288236;
90% Identity: iTF_00288236;
80% Identity: -