Cfun018255.1
Basic Information
- Insect
- Cecidostiba fungosa
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_900474305.1
- Location
- UCOJ01000359.1:48107-50471[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.1e-112 9.8e-108 360.1 37.0 1 300 29 326 29 326 0.97 2 3 0.0074 1.4e+02 1.6 1.8 122 171 326 375 324 379 0.87 3 3 0.027 5.1e+02 -0.2 4.8 195 237 358 399 338 401 0.57
Sequence Information
- Coding Sequence
- ATGGAGACATCCGTGGCTGGAAGGCGGCGGACCACCACCAGGCATTCTGCCGAGGATCAGGCACTCGATCAGATTGCCAAAGAGgCAGAAGCAAGATTGGCTGCCAAAAGACAAGCTAGAGCTGAGGCACGAGAAATACGAATGAGGGAGTTAGAAAAGCAGCAGAAAGAAGCTGAGGAGAATGCGGATAGAGTCTTTGATATGTGCACAGCGGATGCAAATAGAGCCATGAGAGTAACACCAGATCCTATGCGCGCCTCTCGGCTTCTTTTAAGcacaaacaattttcaatcaagTCGAAGATCTTCTGAAGATTCTTTGGAAGATGCAGGTCTTGGCAGGGATCTTCGAataGAGCTAAAAGAGTTTGAAGAGAAATTCCGTAAAGCAATGATAGCTAATGCACAATTAGACAATGAAAAGTCTTCCTATAGTTATCAAGTCGATTTGTTAAAGGACAAGCTTGAAGAGCTTGAAGAAATGACTGCCCAGTTGCGCCGCGAACTCAGGGAAAAGAATCGCGAAGCAGATCAATCTAAGCGTCTTAGTCAGAGATTAAAAGAAGATTTAGACATTTGCAGGGCACAACTTTTAGAAAGAGATACTCTAATACAGGAAAATGGCCTGGTAATAGTTGAAGATGAAGGCAGTGAGGGTGAGGAAACACAAAAAGAGAATGGACCTGTTGCTAGAAAGAGAGTACTAGTCAGTACAGAAGCTGCagaattattacaaaatgcTGGAGAAGGCTCTttagATGTTCGACTGCGAAAGTTTGCTTCTGAGAAGAAAGAACAACAAGATGAAATTAGGCATCTTAGGCTAGAATTGGAAGAAGCAAGAAATAGAATGAGGCCAGAGAGATCCTCTGGTTCTGTGCTAGGTTTATCAGATTCAGAAGATGCTCAGAGAGAAGCTAATAAACTCTTAGCAGATTATAAGTTTAAGTTACAAAAAGCAGAGCAAGACATGTCTACACTTCAAGCAACTGTGGCCAGGTTGGAGAGTCAAGTAATTCGTTATAAATCTGCTGCTGAGGCTTCGGAAAAAGTAGAAGATGAACTAAAAGTTGAAAAGAGGAAATTACAAAGAGAGGTGCGGGAATCACAAGGAAGAGTGGAAGAGCTGGAGACAGCTAATTCCCATTTGCAGCGACGTTTGGATAAACTGAAAAACGCTAAATCAGCCCTCTTGAAGGAACTGTGA
- Protein Sequence
- METSVAGRRRTTTRHSAEDQALDQIAKEAEARLAAKRQARAEAREIRMRELEKQQKEAEENADRVFDMCTADANRAMRVTPDPMRASRLLLSTNNFQSSRRSSEDSLEDAGLGRDLRIELKEFEEKFRKAMIANAQLDNEKSSYSYQVDLLKDKLEELEEMTAQLRRELREKNREADQSKRLSQRLKEDLDICRAQLLERDTLIQENGLVIVEDEGSEGEETQKENGPVARKRVLVSTEAAELLQNAGEGSLDVRLRKFASEKKEQQDEIRHLRLELEEARNRMRPERSSGSVLGLSDSEDAQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKVEDELKVEKRKLQREVRESQGRVEELETANSHLQRRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_01428278;
- 80% Identity
- -